HHsearch alignment for GI: 254780334 and conserved domain: smart00382

>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Probab=98.65  E-value=2.7e-07  Score=72.81  Aligned_cols=144  Identities=22%  Similarity=0.294  Sum_probs=82.7

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHCCCC
Q ss_conf             87089995498751889999999998503981999986463047888875201577510000347889999999731698
Q gi|254780334|r   89 RGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRLNTINSSVYIAIETNVEDIIATLITNEKP  168 (479)
Q Consensus        89 ~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~~il~~~i~~~~~  168 (479)
T Consensus         1 ~~~~ill~G~~GsGKTtl~~~la~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   79 (148)
T smart00382        1 PGEVILIVGPPGSGKTTLARALARELGPPGGGVIYIDGEDILEEVLDQLLLIIVGGKKASGSGELRLRLALA-LARKLKP   79 (148)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH-HHHHCCC
T ss_conf             997899999997029999999998726689968998759989888987653000112210519999999999-9984499


Q ss_pred             CEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEE
Q ss_conf             289972168766542044556367999999999997530797899986303665433114578775302785
Q gi|254780334|r  169 DLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYF  240 (479)
Q Consensus       169 ~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~  240 (479)
T Consensus        80 ~viiiDei~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~vi~~~n~-~~~~~~~~~~~~~~~~~~~  144 (148)
T smart00382       80 DVLILDEITSLLDAEQEAL----LLLLEE--LRLLLLLKSEKNLTVILTTND-EKDLGPALLRRRFDRRIVL  144 (148)
T ss_pred             CEEEEECCHHHCCCCCHHH----HHHHHH--HHHHCCCCCCCCEEEEEEECC-CCCCCHHHHCCCCCEEEEE
T ss_conf             8999827502147620799----999999--998517657899899995699-5224987707447879998