HHsearch alignment for GI: 254780335 and conserved domain: pfam02674
>pfam02674 Colicin_V Colicin V production protein. Colicin V production protein is required in E. Coli for colicin V production from plasmid pColV-K30. This protein is coded for in the purF operon.
Probab=97.12 E-value=0.013 Score=32.01 Aligned_cols=123 Identities=13% Similarity=0.132 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999988999999999999999999999999999998403988999999999999999999999999999999
Q gi|254780335|r 12 GFISISSMLAMARGIFSEMISLTNWIVAAIMTRYLYPMLLERVSEFFKSKQVAIIMTIIPLFLIILTVVSILLKIMSTPI 91 (156)
Q Consensus 12 ~ii~~~~~~G~~rG~i~e~~sl~~wi~a~~~a~~~~~~l~~~l~~~~~~~~~~~i~a~~~iFi~~~i~~~~i~~~l~~~i 91 (156)
T Consensus 3 ~iii~il~~~~~~G~~rG~i~e~~~l~~~i~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~a~~iifi~~~~i~~~i~~~l 82 (145)
T pfam02674 3 IIILLILLLSALLGFRRGFVREVLSLLGWVVAFFVASLFYPPLAPLLAEYVLSPALAAIIAFLLIFLLVLLIGSLLGVLL 82 (145)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 09999999999999999999999999999999999999999999998843797899999999999999999999999999
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
Q ss_conf 85222-34489999999999999999999999974294524389
Q gi|254780335|r 92 RIRSV-LLDKILGCAFGGVRGLFLLIITTSCWNLIVHESREPAW 134 (156)
Q Consensus 92 ~~~~~-~~Dr~lG~~fG~~rg~li~~i~~~~~~~~~~~~~~~~~ 134 (156)
T Consensus 83 ~~~~~~~~l~~~dr~lG~~~G~~k~~li~~~~~~~~~~~~~~~~ 126 (145)
T pfam02674 83 RKLVKLSGLGGLDRLLGAVFGLLRGLLILSVLLFLLALFPLPGV 126 (145)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99998805343899999999999999999999999997689877