HHsearch alignment for GI: 254780336 and conserved domain: COG0449
>COG0449 GlmS Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane].
Probab=100.00 E-value=7.2e-43 Score=325.17 Aligned_cols=257 Identities=26% Similarity=0.428 Sum_probs=203.5
Q ss_pred CCEEEEEEC-CCCHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEECCCCHHHHCCCHHHHHHCCCCEEEEEEECCCCC
Q ss_conf 565999981-8533689999998773158870279999799699980487167631504443206876789875122268
Q gi|254780336|r 14 KCGVFGILG-HPDAATLTAIGLHALQHRGQEATGIISFNGNKFHSERHLGLVGDHFTKPETLSLLPGNMAIGHVRYSTTG 92 (488)
Q Consensus 14 eCGI~Gi~~-~~~~~~~~~~gL~~LQHRGqdsaGIa~~d~~~i~~~K~~GlV~dvf~~~~~l~~l~G~~~IGHvRYsT~G 92 (488)
T Consensus 1 MCGIvG~i~~~~~~~~il~~gL~rLEYRGYDSaGiav~~~~~l~~~k~~Gkv~~l-~~~~~~~~~~~~~gIgHTRWATHG 79 (597)
T COG0449 1 MCGIVGYIGFLREAIDILLEGLKRLEYRGYDSAGIAVVGDGSLNVRKQVGKISNL-EELLNKEPLIGGVGIAHTRWATHG 79 (597)
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEECCCCHHHH-HHHHCCCCCCCCEEEEECCCCCCC
T ss_conf 9868999748853899999998887706777565799817818999825778788-765322566774555565446789
Q ss_pred CCCCCCCCCEEEECCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCE
Q ss_conf 98600278678746997199999655087899999998649824234307898898987302567056899998653043
Q gi|254780336|r 93 DQIIRNVQPLFADLQVGGIAIAHNGNFTNGLTLRKKLISSGAIFQSTSDTEVILHLIARSQKNGSCDRFIDSLRHVQGAY 172 (488)
Q Consensus 93 ~~~~~n~QPf~~~~~~g~iaiaHNGnI~N~~eLr~~L~~~g~~f~s~sDTEvI~~Li~~~~~~~~~e~i~~~l~~l~Gay 172 (488)
T Consensus 80 ~P~~~NAHPh~----~~~~avVHNGIIeN~~eLr~eL~~~G~~F~S~TDTEVi~hLi~~~~~~~~~~a~~~~l~~l~Gsy 155 (597)
T COG0449 80 GPTRANAHPHS----DGEFAVVHNGIIENFAELKEELEAKGYVFKSDTDTEVIAHLLEEIYDTSLLEAVKKVLKRLEGSY 155 (597)
T ss_pred CCCCCCCCCCC----CCCEEEEECCHHHCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
T ss_conf 88857789898----89799995734227899999999669888567614899999999986469999999998714305
Q ss_pred EEEEEEC---CEEEEEEECCCCCEEEEEECCCEEEEEECCHHCCCCCCCEEEECCCCEEEEEEECCCCEEEEEEEECCCC
Q ss_conf 9999639---9799998256654159982695699986120010478741233178707999408984799875307765
Q gi|254780336|r 173 AMLALTR---TKLIATRDPIGIRPLIMGELHGKPIFCSETCALEITGAKYIRDVENGETIVCELQEDGFISIDSYKNPST 249 (488)
Q Consensus 173 slv~l~~---~~l~~~RDp~GiRPL~~G~~~~~~v~ASEs~Al~~ig~~~irdv~PGEiivi~~~~~g~~~i~~~~~~~~ 249 (488)
T Consensus 156 al~~~~~~~p~~i~~ar--~~-sPL~iG~g~~e~f~aSD~~a~l~~t~~-~~~l~dgd~~~~~--~~~v~-~~---~g~- 224 (597)
T COG0449 156 ALLCTHSDFPDELVAAR--KG-SPLVIGVGEGENFLASDVSALLNFTRR-FVYLEEGDIAKLT--TDGVS-IN---DGN- 224 (597)
T ss_pred EEEEEECCCCCEEEEEC--CC-CCEEEEECCCCCEEECCHHHHHHHHCE-EEEECCCCEEEEE--CCCEE-EE---CCE-
T ss_conf 79998269997399986--89-985999658861586172666654146-8996699789997--79589-85---580-
Q ss_pred CCCCEEEEEHHCCCCCCCCC---CCHHHHHHHHHHHHHHH
Q ss_conf 66420000010024743000---37289999999999998
Q gi|254780336|r 250 SPERMCIFEYVYFARPDSII---SGRSIYVSRRNMGKNLA 286 (488)
Q Consensus 250 ~~~~~C~FEyIYFarpdS~~---~g~~Vy~~R~~lG~~La 286 (488)
T Consensus 225 v~r~~~~~~~~~~~a~Kg~y~hfMlKEI~EQP~~i~~tl~ 264 (597)
T COG0449 225 VLRDVPVIEWDLCAAEKGGFRHFMLKEIYEQPEALRNTLQ 264 (597)
T ss_pred EEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 6653477216764775399874078888743999999998