HHsearch alignment for GI: 254780336 and conserved domain: KOG1448

Probab=94.18  E-value=0.14  Score=31.23  Aligned_cols=90  Identities=22%  Similarity=0.268  Sum_probs=61.6

Q ss_pred             CCCCCCCCCCCCCHHHH-HHHHHHHCCCCEEHHEECCCCCCCEEEECCHHHHHHHHHHCCCCCHHHHCCCCEEEEEHHHH
Q ss_conf             65677201200120477-99999981996001001176532101106446777653201343245533893289740353
Q gi|254780336|r  290 PVIADIVVPIPDGGVPA-AIGYAKESGIPFEQGIIRNHYVGRTFIEPSHHIRAFGVKLKHSANRTILAGKRVVLIDDSIV  368 (488)
Q Consensus       290 ~~~~DiV~~VPdsg~~a-A~gya~~~gip~~~~lvkn~y~gRtFI~p~~~~R~~~v~~K~~~~~~~i~gk~vvlvDDSIV  368 (488)
T Consensus       160 ~~~~~~vivSPdaGgaKR~~s~ad~l~~~fal-i~ker~--k~----------~~v~~~m-~LVGDv~gkvaIlVDDm~d  225 (316)
T KOG1448         160 PDSENAVIVSPDAGGAKRVTSLADRLNLDFAL-IHKERR--KA----------NEVDIRM-VLVGDVKGKVAILVDDMAD  225 (316)
T ss_pred             CCCCCEEEECCCCCHHHHHHHHHHHHCCHHHH-HHHHHH--CC----------CCCCEEE-EEEECCCCCEEEEECCCCC
T ss_conf             87453189878864556667777752115553-301420--04----------5542589-9985367868999436411


Q ss_pred             HHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             3333888999998539978999965
Q gi|254780336|r  369 RGTTSVKIVQMIRSAGASEVHLRVA  393 (488)
Q Consensus       369 RGtT~k~iv~~lr~aGa~evh~ri~  393 (488)
T Consensus       226 t~GTl~~aa~~L~~~GA~kV~a~~T  250 (316)
T KOG1448         226 TCGTLIKAADKLLEHGAKKVYAIVT  250 (316)
T ss_pred             CCCHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             3641999999998658745999971