HHsearch alignment for GI: 254780336 and conserved domain: PRK02277

Probab=98.16  E-value=1.2e-05  Score=60.01  Aligned_cols=110  Identities=28%  Similarity=0.281  Sum_probs=76.7

Q ss_pred             HHHHHHHHH-HHHHHH-----HHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHEECCCCCCCEEEECCHHHHHH-HH
Q ss_conf             289999999-999998-----74865677201200120477999999819960010011765321011064467776-53
Q gi|254780336|r  272 RSIYVSRRN-MGKNLA-----KESPVIADIVVPIPDGGVPAAIGYAKESGIPFEQGIIRNHYVGRTFIEPSHHIRAF-GV  344 (488)
Q Consensus       272 ~~Vy~~R~~-lG~~La-----~~~~~~~DiV~~VPdsg~~aA~gya~~~gip~~~~lvkn~y~gRtFI~p~~~~R~~-~v  344 (488)
T Consensus        61 ig~~~~Rl~~Ia~~maD~~~e~~~~~evD~vvGIa~~GIPlAt~vA~~l~~~l~iy~P~k------~------~~~e~~~  128 (201)
T PRK02277         61 VGKSSSRLRYIALAMADMLLLNKEGVEVDVVVGIAISGVPLATLMADELGKDLAIYHPKK------H------QHDEGKK  128 (201)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCC------C------CCCCCCC
T ss_conf             577778999999999999987533787647987523684189999998527611561355------5------6666787


Q ss_pred             HHCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             2013432455338932897403533333888999998539978999965
Q gi|254780336|r  345 KLKHSANRTILAGKRVVLIDDSIVRGTTSVKIVQMIRSAGASEVHLRVA  393 (488)
Q Consensus       345 ~~K~~~~~~~i~gk~vvlvDDSIVRGtT~k~iv~~lr~aGa~evh~ri~  393 (488)
T Consensus       129 ~G~~s~nfa~V~Gk~VlIVDDViTTG~T~~e~ie~l~~~Ga~vv~~~Vl  177 (201)
T PRK02277        129 TGSISRNFASVAGKRCVIVDDVITSGNTMKETIEYLKEHGAKPVAVVVL  177 (201)
T ss_pred             CCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEE
T ss_conf             7621341034378789999702377824999999999869979999999