HHsearch alignment for GI: 254780336 and conserved domain: PRK03675

Probab=98.01  E-value=2.6e-05  Score=57.64  Aligned_cols=87  Identities=22%  Similarity=0.398  Sum_probs=66.4

Q ss_pred             CCCCCCCCHHH-HHHHHHHHCCCCEEHHEECCCCCCCEEEECCHHHHHHHHHHCCCCCHHHHCCCCEEEEEHHHHHHHHH
Q ss_conf             20120012047-79999998199600100117653210110644677765320134324553389328974035333338
Q gi|254780336|r  295 IVVPIPDGGVP-AAIGYAKESGIPFEQGIIRNHYVGRTFIEPSHHIRAFGVKLKHSANRTILAGKRVVLIDDSIVRGTTS  373 (488)
Q Consensus       295 iV~~VPdsg~~-aA~gya~~~gip~~~~lvkn~y~gRtFI~p~~~~R~~~v~~K~~~~~~~i~gk~vvlvDDSIVRGtT~  373 (488)
T Consensus       154 vVV-sPD~G~~~ra~~~A~~lg~~~~~-~~K~R~~~~~------------v--~~~~~~~dV~Gk~vIIVDDiIdTGgTl  217 (279)
T PRK03675        154 LVL-APDKGALERAKAVAEVLGLEYSH-FEKERISPTE------------V--EMTPVDVDVKGKNVLIVDDIISTGGTM  217 (279)
T ss_pred             EEE-ECCCCHHHHHHHHHHHHCCCEEE-EEECCCCCCC------------E--EECCCCCCCCCCEEEEECCCCCCHHHH
T ss_conf             899-78988899999999861786578-8732678982------------1--652555554796799974510252789


Q ss_pred             HHHHHHHHHCCCCEEEEEECCCCC
Q ss_conf             889999985399789999658980
Q gi|254780336|r  374 VKIVQMIRSAGASEVHLRVASPMV  397 (488)
Q Consensus       374 k~iv~~lr~aGa~evh~ri~sPpi  397 (488)
T Consensus       218 ~~aa~~Lk~~GA~~V~~~aTHglf  241 (279)
T PRK03675        218 IRAAEILRKLGAKKIFVVATHGVF  241 (279)
T ss_pred             HHHHHHHHHCCCCEEEEEEECCCC
T ss_conf             999999997699869999978106