HHsearch alignment for GI: 254780336 and conserved domain: PRK04554
>PRK04554 consensus.
Probab=97.84 E-value=4.5e-05 Score=55.98 Aligned_cols=145 Identities=14% Similarity=0.126 Sum_probs=93.4
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCHHH-HHHHHHHHCCCCEEHHEECCCCCCCEEEECCHHHHHHHHHHCCCCCHHHHCCCC
Q ss_conf 9999987486567720120012047-799999981996001001176532101106446777653201343245533893
Q gi|254780336|r 281 MGKNLAKESPVIADIVVPIPDGGVP-AAIGYAKESGIPFEQGIIRNHYVGRTFIEPSHHIRAFGVKLKHSANRTILAGKR 359 (488)
Q Consensus 281 lG~~La~~~~~~~DiV~~VPdsg~~-aA~gya~~~gip~~~~lvkn~y~gRtFI~p~~~~R~~~v~~K~~~~~~~i~gk~ 359 (488)
T Consensus 155 l~~~i~~~-~~~-~~vvVsPD~G~~~ra~~~A~~L~~~~a~-~~K~R~~~~~~~--------------~~~~vgdV~Gk~ 217 (327)
T PRK04554 155 LLNDIKQQ-RIE-NLTVVSPDIGGVVRARAVAKSLNADLAI-IDKRRPKANVAE--------------VMNIIGDIQGRT 217 (327)
T ss_pred HHHHHHHC-CCC-CCEEECCCCCHHHHHHHHHHHCCCCEEE-EEEECCCCCCEE--------------EECCCCCCCCCE
T ss_conf 99999860-778-7289837953899999999756887799-996448998226--------------512556412223
Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCCHHHHHHCCCCCHHHHHHHHCCCEEEEECHH
Q ss_conf 28974035333338889999985399789999658980588656500589788854669998899987099778883398
Q gi|254780336|r 360 VVLIDDSIVRGTTSVKIVQMIRSAGASEVHLRVASPMVLYPDFYGIDIPDPTALLANKCSSPQEMCNFIGVDSLGFLSVD 439 (488)
Q Consensus 360 vvlvDDSIVRGtT~k~iv~~lr~aGa~evh~ri~sPpi~~pc~yGid~p~~~eLia~~~~~~eei~~~igadsl~yls~e 439 (488)
T Consensus 218 ~IIVDDiIdTGgTl~~aa~~Lk~~GA~~V~~~aTHglfs~~A~~rl~~s~i~~ivvTn--TIp~~~~~~~~~Ki~vlsva 295 (327)
T PRK04554 218 CLIVDDMIDTANTLCKAAVALKERGAERVLAYASHAVFSGEAVSRIASSEIDQVVVTD--TIPLSEAAKNCDRIRQVTIA 295 (327)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEEC--CCCCCHHHCCCCCEEEEEHH
T ss_conf 6720432135067999999999769987899987916063399999718997899918--97687456258980998889
Q ss_pred HHHHH
Q ss_conf 99986
Q gi|254780336|r 440 GLYNA 444 (488)
Q Consensus 440 ~l~~a 444 (488)
T Consensus 296 ~llAe 300 (327)
T PRK04554 296 GLLAE 300 (327)
T ss_pred HHHHH
T ss_conf 99999