HHsearch alignment for GI: 254780336 and conserved domain: PRK05259

Probab=97.85  E-value=4.3e-05  Score=56.13  Aligned_cols=135  Identities=19%  Similarity=0.209  Sum_probs=88.5

Q ss_pred             CCCCCCCCCCHHH-HHHHHHHHCCCCEEHHEECCCCCCCEEEECCHHHHHHHHHHCCCCCHHHHCCCCEEEEEHHHHHHH
Q ss_conf             7720120012047-799999981996001001176532101106446777653201343245533893289740353333
Q gi|254780336|r  293 ADIVVPIPDGGVP-AAIGYAKESGIPFEQGIIRNHYVGRTFIEPSHHIRAFGVKLKHSANRTILAGKRVVLIDDSIVRGT  371 (488)
Q Consensus       293 ~DiV~~VPdsg~~-aA~gya~~~gip~~~~lvkn~y~gRtFI~p~~~~R~~~v~~K~~~~~~~i~gk~vvlvDDSIVRGt  371 (488)
T Consensus       159 ~~~vvVsPD~G~~~ra~~~a~~l~~~~~~-~~K~R~------~~~~--~------~~~~~~gdV~Gk~~IIvDDiIdTGg  223 (310)
T PRK05259        159 GNVMVVSPDVGGVVRARALAKRLDAPLAI-VDKRRE------RPGE--S------EVMNVIGDVSGRDCILIDDIVDSGG  223 (310)
T ss_pred             CCEEEECCCCHHHHHHHHHHHHCCCCEEE-EEEEEC------CCCC--C------CCCCCCCCCCCCEEEEECCHHHCHH
T ss_conf             66399914926999999999981996789-998606------8995--4------3345456623124895173441688


Q ss_pred             HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCCHHHHHHCCCCCHHHHHHHHCCCEEEEECHHHHHHH
Q ss_conf             3888999998539978999965898058865650058978885466999889998709977888339899986
Q gi|254780336|r  372 TSVKIVQMIRSAGASEVHLRVASPMVLYPDFYGIDIPDPTALLANKCSSPQEMCNFIGVDSLGFLSVDGLYNA  444 (488)
Q Consensus       372 T~k~iv~~lr~aGa~evh~ri~sPpi~~pc~yGid~p~~~eLia~~~~~~eei~~~igadsl~yls~e~l~~a  444 (488)
T Consensus       224 Tl~~aa~~Lk~~GA~~V~~~~THgvfs~~A~~ri~~s~i~~vvvTd--Ti~~~~~~~~~~kl~vlsva~llAe  294 (310)
T PRK05259        224 TLCNAAEALLANGANSVTAYITHGVLSGGAVARIASSKLKELVITD--SIQPTEAVNDAPNIRVLSIAPLIGE  294 (310)
T ss_pred             HHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEEEC--CCCCCHHHHCCCCCEEEEHHHHHHH
T ss_conf             9999999998779986999997853685699998628997899938--9788845705899399982999999