HHsearch alignment for GI: 254780336 and conserved domain: PRK09177

Probab=97.30  E-value=0.0013  Score=45.60  Aligned_cols=120  Identities=19%  Similarity=0.206  Sum_probs=78.7

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHEECCCCCCCEEEECCHHHHHHHHHHCCCCCHH
Q ss_conf             99999999999987486567720120012047799999981996001001176532101106446777653201343245
Q gi|254780336|r  274 IYVSRRNMGKNLAKESPVIADIVVPIPDGGVPAAIGYAKESGIPFEQGIIRNHYVGRTFIEPSHHIRAFGVKLKHSANRT  353 (488)
Q Consensus       274 Vy~~R~~lG~~La~~~~~~~DiV~~VPdsg~~aA~gya~~~gip~~~~lvkn~y~gRtFI~p~~~~R~~~v~~K~~~~~~  353 (488)
T Consensus        15 i~~~~~~LA~kI~~~~--~~d~IV~IaRGGliPA~~ls~~L~i~~i~~i~v~~Y~~------~~-~~~~~v~~~~-----   80 (156)
T PRK09177         15 LHRDARALAWRLLPAG--QWKGIIAVTRGGLVPAAILARELGIRLVDTVCISSYDH------DN-QGELKVLKAA-----   80 (156)
T ss_pred             HHHHHHHHHHHHHHCC--CCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEEEECCC------CC-CCCCEEECCC-----
T ss_conf             9999999999998508--98669999147831599999985984057999996156------65-5654254167-----


Q ss_pred             HHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCC
Q ss_conf             53389328974035333338889999985399789999658980588656500589
Q gi|254780336|r  354 ILAGKRVVLIDDSIVRGTTSVKIVQMIRSAGASEVHLRVASPMVLYPDFYGIDIPD  409 (488)
Q Consensus       354 ~i~gk~vvlvDDSIVRGtT~k~iv~~lr~aGa~evh~ri~sPpi~~pc~yGid~p~  409 (488)
T Consensus        81 ~~~gkkVLIVDDI~DTG~Tl~~vk~~~~~~~~Atl~~K~~s~~--~pD~y~~e~~~  134 (156)
T PRK09177         81 EGDGEGFLVVDDLVDTGGTARAVREMYPKAHFATVYAKPAGRP--LVDTYVTDVSQ  134 (156)
T ss_pred             CCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECCCCC--CCCCEEEECCC
T ss_conf             7778628999534366378999998678855999998256777--89826858689