HHsearch alignment for GI: 254780337 and conserved domain: COG3007
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown].
Probab=95.28 E-value=0.17 Score=30.12 Aligned_cols=186 Identities=16% Similarity=0.146 Sum_probs=101.3
Q ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEE--ECCHHH---------HH-HHHHHHHHCCCCEEEEECCCCCHHHHHH
Q ss_conf 8999993899868899999999-889989999--789899---------99-9999998649928999878999999999
Q gi|254780337|r 18 NRLALVTGSSRGIGYYTALELA-RSGAYVIAC--GRSISQ---------LE-KLKNALQKINKKIDIFAFDLRDSNALEL 84 (257)
Q Consensus 18 ~K~alVTGas~GIG~a~a~~la-~~G~~Vi~~--~r~~~~---------l~-~~~~~~~~~g~~~~~~~~Dv~d~~~v~~ 84 (257)
T Consensus 41 PKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~k 120 (398)
T COG3007 41 PKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQK 120 (398)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHH
T ss_conf 83599984587621889999874788763668741587668875213367789999998567243313653101789999
Q ss_pred HHHHHHHHHCCCCEEEECCCCCCC------------CCC---------------------HHHCCHHHHHHHHHHHHHHH
Q ss_conf 999999981898799876875888------------888---------------------67659999999999998999
Q gi|254780337|r 85 TKTYIAKRWGKLDILIANAGILGS------------ISP---------------------IWQIKEKSFADVISVNVMAN 131 (257)
Q Consensus 85 ~~~~~~~~~g~iDilVNNAGi~~~------------~~~---------------------~~~~~~e~~~~~~~vNl~g~ 131 (257)
T Consensus 121 vIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGGeD 200 (398)
T COG3007 121 VIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGGED 200 (398)
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCH
T ss_conf 99999976164027998614744358984112575331200102556202565400121036651888887777227512
Q ss_pred HHH-HHHHHHHHHHCCCCEEEEECCHHHCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCC
Q ss_conf 999-99999999860898699978835647889--8368898999999999999998544386997553288379
Q gi|254780337|r 132 WNI-MRSFDPWLKKSHCGRAIILSSGAAYKCRP--LWGAYSASKAAIEALARTWSKETVNTALRVINIDPGPTRT 203 (257)
Q Consensus 132 ~~l-~~~~~~~m~~~~~G~IInisS~~g~~~~~--~~~~Y~asKaal~~lt~~la~E~~~~gIrvn~I~PG~v~T 203 (257)
T Consensus 201 Wq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~vsVlKavVT 275 (398)
T COG3007 201 WQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARVSVLKAVVT 275 (398)
T ss_pred HHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEECCCCCHHHHCHHHHHHHHHHHHHHCCCCEEEEEHHHHHH
T ss_conf 999999987434003676178887217765443241462036542578899999999875279715630588886