HHsearch alignment for GI: 254780337 and conserved domain: COG3268
>COG3268 Uncharacterized conserved protein [Function unknown].
Probab=96.82 E-value=0.0058 Score=39.93 Aligned_cols=142 Identities=19% Similarity=0.240 Sum_probs=83.8
Q ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCE
Q ss_conf 99999389986889999999988998999978989999999999864992899987899999999999999998189879
Q gi|254780337|r 19 RLALVTGSSRGIGYYTALELARSGAYVIACGRSISQLEKLKNALQKINKKIDIFAFDLRDSNALELTKTYIAKRWGKLDI 98 (257)
Q Consensus 19 K~alVTGas~GIG~a~a~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDi 98 (257)
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L---G~~~~~~p~~~--p~~~~~~~~-------~~~V 74 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL---GPEAAVFPLGV--PAALEAMAS-------RTQV 74 (382)
T ss_pred EEEEEECCCCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHC---CCCCCCCCCCC--HHHHHHHHH-------CCEE
T ss_conf 03899746552158999999974886432168889998899850---96644467788--899999974-------2668
Q ss_pred EEECCCCCCCC-CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH-HH--HCCCCEEEEECCHHHCCCCC-CCHHHHHHHH
Q ss_conf 98768758888-88676599999999999989999999999999-98--60898699978835647889-8368898999
Q gi|254780337|r 99 LIANAGILGSI-SPIWQIKEKSFADVISVNVMANWNIMRSFDPW-LK--KSHCGRAIILSSGAAYKCRP-LWGAYSASKA 173 (257)
Q Consensus 99 lVNNAGi~~~~-~~~~~~~~e~~~~~~~vNl~g~~~l~~~~~~~-m~--~~~~G~IInisS~~g~~~~~-~~~~Y~asKa 173 (257)
T Consensus 75 VlncvGPyt~~g~plv~aC~~--~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~~---cGFDsIPsDl~v~~l~~~ 149 (382)
T COG3268 75 VLNCVGPYTRYGEPLVAACAA--AGTDYADITGEIMFFENSIDLYHAQAADAGARIIPG---CGFDSIPSDLGVYALLKQ 149 (382)
T ss_pred EEECCCCCCCCCCHHHHHHHH--HCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEECC---CCCCCCCCCHHHHHHHHH
T ss_conf 996146612026479999997--198724135617999999888777887559789666---777767640189999986
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780337|r 174 AIEA 177 (257)
Q Consensus 174 al~~ 177 (257)
T Consensus 150 ~~~d 153 (382)
T COG3268 150 ALPD 153 (382)
T ss_pred HCCC
T ss_conf 4764