HHsearch alignment for GI: 254780337 and conserved domain: COG3268

>COG3268 Uncharacterized conserved protein [Function unknown].
Probab=96.82  E-value=0.0058  Score=39.93  Aligned_cols=142  Identities=19%  Similarity=0.240  Sum_probs=83.8

Q ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCE
Q ss_conf             99999389986889999999988998999978989999999999864992899987899999999999999998189879
Q gi|254780337|r   19 RLALVTGSSRGIGYYTALELARSGAYVIACGRSISQLEKLKNALQKINKKIDIFAFDLRDSNALELTKTYIAKRWGKLDI   98 (257)
Q Consensus        19 K~alVTGas~GIG~a~a~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDi   98 (257)
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L---G~~~~~~p~~~--p~~~~~~~~-------~~~V   74 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL---GPEAAVFPLGV--PAALEAMAS-------RTQV   74 (382)
T ss_pred             EEEEEECCCCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHC---CCCCCCCCCCC--HHHHHHHHH-------CCEE
T ss_conf             03899746552158999999974886432168889998899850---96644467788--899999974-------2668


Q ss_pred             EEECCCCCCCC-CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH-HH--HCCCCEEEEECCHHHCCCCC-CCHHHHHHHH
Q ss_conf             98768758888-88676599999999999989999999999999-98--60898699978835647889-8368898999
Q gi|254780337|r   99 LIANAGILGSI-SPIWQIKEKSFADVISVNVMANWNIMRSFDPW-LK--KSHCGRAIILSSGAAYKCRP-LWGAYSASKA  173 (257)
Q Consensus        99 lVNNAGi~~~~-~~~~~~~~e~~~~~~~vNl~g~~~l~~~~~~~-m~--~~~~G~IInisS~~g~~~~~-~~~~Y~asKa  173 (257)
T Consensus        75 VlncvGPyt~~g~plv~aC~~--~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~~---cGFDsIPsDl~v~~l~~~  149 (382)
T COG3268          75 VLNCVGPYTRYGEPLVAACAA--AGTDYADITGEIMFFENSIDLYHAQAADAGARIIPG---CGFDSIPSDLGVYALLKQ  149 (382)
T ss_pred             EEECCCCCCCCCCHHHHHHHH--HCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEECC---CCCCCCCCCHHHHHHHHH
T ss_conf             996146612026479999997--198724135617999999888777887559789666---777767640189999986


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780337|r  174 AIEA  177 (257)
Q Consensus       174 al~~  177 (257)
T Consensus       150 ~~~d  153 (382)
T COG3268         150 ALPD  153 (382)
T ss_pred             HCCC
T ss_conf             4764