HHsearch alignment for GI: 254780337 and conserved domain: PRK05134

>PRK05134 3-demethylubiquinone-9 3-methyltransferase; Provisional.
Probab=95.25  E-value=0.097  Score=31.76  Aligned_cols=167  Identities=18%  Similarity=0.204  Sum_probs=95.8

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf             24889999938998688999999998899899997898999999999986499289998789999999999999999818
Q gi|254780337|r   15 NLDNRLALVTGSSRGIGYYTALELARSGAYVIACGRSISQLEKLKNALQKINKKIDIFAFDLRDSNALELTKTYIAKRWG   94 (257)
Q Consensus        15 ~l~~K~alVTGas~GIG~a~a~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   94 (257)
T Consensus        46 ~l~G~~ILDVGCGgG~---lse~LAr~Ga~VtGID~S~~~I~~Ar~ha~~~~l~i~y~~~~~e~l~---------~~~~~  113 (233)
T PRK05134         46 GLFGKRVLDVGCGGGI---LSESMARLGATVTGIDASEENIEVARLHALESGLKIDYRQITAEELA---------AEHPG  113 (233)
T ss_pred             CCCCCEEEEECCCCCH---HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCHHHHH---------HHCCC
T ss_conf             6689989997558971---12899967997999879989999999985644345116751476654---------30578


Q ss_pred             CCCEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCHHHHHHHHH
Q ss_conf             98799876875888888676599999999999989999999999999986089869997883564788983688989999
Q gi|254780337|r   95 KLDILIANAGILGSISPIWQIKEKSFADVISVNVMANWNIMRSFDPWLKKSHCGRAIILSSGAAYKCRPLWGAYSASKAA  174 (257)
Q Consensus        95 ~iDilVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~~~~~~m~~~~~G~IInisS~~g~~~~~~~~~Y~asKaa  174 (257)
T Consensus       114 ~FDvV~~~-EVlEHV~--------d~-----------~~~l~~~~rlL--KPGG~l~lsT------iNrt~~S~l~~i~~  165 (233)
T PRK05134        114 QFDVVTCM-EMLEHVP--------DP-----------ASFIRACAKLV--KPGGLVFFST------LNRNLKSYLLAIVG  165 (233)
T ss_pred             CEEEEEEE-HHHHHCC--------CH-----------HHHHHHHHHHH--CCCCEEEEEC------CCCCHHHHHHHHHH
T ss_conf             63477442-1477538--------99-----------99999999973--8991499972------67898999999999


Q ss_pred             HHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHH-HCCCCCEEEECCC
Q ss_conf             9999999999854438699755328837977984414443245888899999999961975-6266857987687
Q gi|254780337|r  175 IEALARTWSKETVNTALRVINIDPGPTRTSMRAKAMPAEDPNTVPHPQKVAKIISFLCATQ-KIETGKLFSVPQN  248 (257)
Q Consensus       175 l~~lt~~la~E~~~~gIrvn~I~PG~v~T~m~~~~~~~~~~~~~~~pediA~~v~fL~s~~-~~~tG~~~~vdgG  248 (257)
T Consensus       166 AEyil~----------~----vP~g------------TH~w~kFi~P~el~~~l~~~-~~~~~~~~G~~ynp~~~  213 (233)
T PRK05134        166 AEYILR----------M----LPKG------------THDYKKFIKPSELAAWLRQA-GLEVQDIKGLTYNPLTN  213 (233)
T ss_pred             HHHHHC----------C----CCCC------------CCCHHHCCCHHHHHHHHHHC-CCEEEEEEEEEEECCCC
T ss_conf             988860----------4----9999------------85866679999999999987-99572100079965679