HHsearch alignment for GI: 254780337 and conserved domain: PRK08125
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated.
Probab=94.13 E-value=0.52 Score=26.86 Aligned_cols=207 Identities=14% Similarity=0.092 Sum_probs=124.1
Q ss_pred CCCCE-EEEECCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 48899-9993899868899999999889-989999789899999999998649928999878999999999999999981
Q gi|254780337|r 16 LDNRL-ALVTGSSRGIGYYTALELARSG-AYVIACGRSISQLEKLKNALQKINKKIDIFAFDLRDSNALELTKTYIAKRW 93 (257)
Q Consensus 16 l~~K~-alVTGas~GIG~a~a~~la~~G-~~Vi~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 93 (257)
T Consensus 312 ~~~~~~vlilgvngfig~hl~~~~l~~~~~~v~g~d~~~~~i~~~~-----~~p~~~f~~gdi~~~~------~wie~~i 380 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL-----GHPRFHFVEGDISIHS------EWIEYHI 380 (660)
T ss_pred CCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHH-----CCCCEEEEECCCHHHH------HHHHHHH
T ss_conf 5652279998344136789999985038858998865753455753-----4995488815614668------9999887
Q ss_pred CCCCEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC--CHHHCCC----------
Q ss_conf 8987998768758888886765999999999999899999999999999860898699978--8356478----------
Q gi|254780337|r 94 GKLDILIANAGILGSISPIWQIKEKSFADVISVNVMANWNIMRSFDPWLKKSHCGRAIILS--SGAAYKC---------- 161 (257)
Q Consensus 94 g~iDilVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~~~~~~m~~~~~G~IInis--S~~g~~~---------- 161 (257)
T Consensus 381 kkcdvvlplvaiatp~-~y~~~pl~vfeldfe~nl~----ivr~c~ky~-----kriifpstsevygm~~d~~f~ed~s~ 450 (660)
T PRK08125 381 KKCDVVLPLVAIATPI-EYTRNPLRVFELDFEENLK----IIRYCVKYR-----KRIIFPSTSEVYGMCTDKYFDEDHSN 450 (660)
T ss_pred HHCCEEEEEHHHCCHH-HHHCCCCEEEEECHHHCCH----HHHHHHHHC-----CEEEECCHHHHCCCCCCCCCCCCCCC
T ss_conf 5457673205534747-7634860478732675528----999999748-----77896560551014788676855566
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC-CC-------CC----------HHHHHHCCCCCC--
Q ss_conf ------89836889899999999999999854438699755328-83-------79----------779844144432--
Q gi|254780337|r 162 ------RPLWGAYSASKAAIEALARTWSKETVNTALRVINIDPG-PT-------RT----------SMRAKAMPAEDP-- 215 (257)
Q Consensus 162 ------~~~~~~Y~asKaal~~lt~~la~E~~~~gIrvn~I~PG-~v-------~T----------~m~~~~~~~~~~-- 215 (257)
T Consensus 451 li~gpi~~~RWiYs~sKqlldrvi~A---yg~~~gL~ftlfRpFNw~GPrld~~~~~~~gs~r~itq~i~nl~~g~pi~l 527 (660)
T PRK08125 451 LIVGPINKQRWIYSVSKQLLDRVIWA---YGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKL 527 (660)
T ss_pred CEECCCCCCHHHHHHHHHHHHHHHHH---HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEE
T ss_conf 15677555435787789998899998---776539946998014555888775555334775419999999976998568
Q ss_pred -------CCCCCHHHHHHHHHHHHCH-HHCCCCCEEEEC
Q ss_conf -------4588889999999996197-562668579876
Q gi|254780337|r 216 -------NTVPHPQKVAKIISFLCAT-QKIETGKLFSVP 246 (257)
Q Consensus 216 -------~~~~~pediA~~v~fL~s~-~~~~tG~~~~vd 246 (257)
T Consensus 528 vdgG~QkR~Ft~I~Dgieal~~ii~n~~~~~~g~I~NiG 566 (660)
T PRK08125 528 IDGGAQKRCFTDIRDGIEALFRIIENRGNRCDGQIINIG 566 (660)
T ss_pred ECCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEECC
T ss_conf 548730588876677999999998494555566068758