HHsearch alignment for GI: 254780337 and conserved domain: TIGR01830
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase; InterPro: IPR011284 This entry represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis found in many plant and bacterial species. This enzyme is involved in type II fatty acid biosynthesis, where the individual metabolic transformations are carried out by different enzymes rather than by a single enzyme as occurs in type I fatty acid biosynthesis . Structural studies show that the enzyme is a tetramer which forms a typical Rossman fold , . Unlike other members of the short-chain dehydrogenase/reductase superfamily, the enzyme undergoes a marked conformational change upon binding of the NADP(H)cofactor. This conformational change aligns the side chains of the catalytic triad at the active site in an active conformation and increases the affinity of the enzyme for its substrate.; GO: 0004316 3-oxoacyl-[acyl-carrier-protein] reductase activity, 0051287 NAD binding, 0006633 fatty acid biosynthetic process.
Probab=100.00 E-value=0 Score=530.02 Aligned_cols=228 Identities=29% Similarity=0.397 Sum_probs=218.5
Q ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 9993899868899999999889989999789-899999999998649928999878999999999999999981898799
Q gi|254780337|r 21 ALVTGSSRGIGYYTALELARSGAYVIACGRS-ISQLEKLKNALQKINKKIDIFAFDLRDSNALELTKTYIAKRWGKLDIL 99 (257)
Q Consensus 21 alVTGas~GIG~a~a~~la~~G~~Vi~~~r~-~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDil 99 (257)
T Consensus 1 AlVTGasRGIG~AIA~~LA~~Ga~V~i~y~~~e~~~~~~~~e~~~~G~~a~~~~~dvs~~~~~~~~~~~~~~~~G-iDiL 79 (238)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRTSEEGAEEVVEEIKELGVKAAGVVLDVSDREDVKALVEEAEEELG-IDIL 79 (238)
T ss_pred CEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-CEEE
T ss_conf 967167861679999999867995999659825788899999985697599996038888999999999999829-9089
Q ss_pred EECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 87687588888867659999999999998999999999999998608986999788356478898368898999999999
Q gi|254780337|r 100 IANAGILGSISPIWQIKEKSFADVISVNVMANWNIMRSFDPWLKKSHCGRAIILSSGAAYKCRPLWGAYSASKAAIEALA 179 (257)
Q Consensus 100 VNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~~~~~~m~~~~~G~IInisS~~g~~~~~~~~~Y~asKaal~~lt 179 (257)
T Consensus 80 VNNAGITrD-~Ll~RMk~edWd~Vi~~NL~g~F~~t~~v~~~M~K~R~GrIINisSVVG~~GN~GQaNYaASKAG~IGft 158 (238)
T TIGR01830 80 VNNAGITRD-NLLMRMKEEDWDAVINVNLKGVFNLTQAVLRPMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFT 158 (238)
T ss_pred EECCCCCCC-CHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 978741343-0100488556899998612668788899889887506743486100200006874267888875589999
Q ss_pred HHHHHHHHHHCCEEEEECCCCCCCHHHHH--------HCCCCCCCCCCCHHHHHHHHHHHHCHH-HCCCCCEEEECCCCE
Q ss_conf 99999854438699755328837977984--------414443245888899999999961975-626685798768763
Q gi|254780337|r 180 RTWSKETVNTALRVINIDPGPTRTSMRAK--------AMPAEDPNTVPHPQKVAKIISFLCATQ-KIETGKLFSVPQNRF 250 (257)
Q Consensus 180 ~~la~E~~~~gIrvn~I~PG~v~T~m~~~--------~~~~~~~~~~~~pediA~~v~fL~s~~-~~~tG~~~~vdgG~~ 250 (257)
T Consensus 159 KSlAkElasRnItVNaVAPGFI~TdMT~~L~e~~~~~~l~~IPLgR~G~pEeVA~~v~FLASd~AsYITGqv~~VdGGm~ 238 (238)
T TIGR01830 159 KSLAKELASRNITVNAVAPGFIETDMTDKLSEKVKKAMLSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVDGGMV 238 (238)
T ss_pred HHHHHHCCCCCCEEEEECCCCCCCCCCHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCC
T ss_conf 99998603687058887489989700021698899999852772326776569999997325124742551663068789