HHsearch alignment for GI: 254780337 and conserved domain: TIGR02632
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; InterPro: IPR013454 Rhamnose is a methyl-pentose sugar which is found as a constituent of pectin within the cell walls of dicotyledonous plants and has also been found in the mucilage of a number of legume plants . RhaD from Rhizobium leguminosarum bv. trifolii is encoded by a gene occurring in a rhamnose utilisation cluster, and is necessary for growth on this compound . This protein is predicted to be a bifunctional NAD-dependent aldolase/dehydrogenase..
Probab=100.00 E-value=0 Score=340.87 Aligned_cols=238 Identities=25% Similarity=0.324 Sum_probs=210.7
Q ss_pred EECCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH-HCCC-CEEE------------EECCCCC
Q ss_conf 652488999993899868899999999889989999789899999999998-6499-2899------------9878999
Q gi|254780337|r 13 HVNLDNRLALVTGSSRGIGYYTALELARSGAYVIACGRSISQLEKLKNALQ-KINK-KIDI------------FAFDLRD 78 (257)
Q Consensus 13 ~~~l~~K~alVTGas~GIG~a~a~~la~~G~~Vi~~~r~~~~l~~~~~~~~-~~g~-~~~~------------~~~Dv~d 78 (257)
T Consensus 419 ek~LA~~Va~VtGGasGIG~~~A~rL~~eGAhvV~aD~d~~~a~~va~~~~~~fG~d~a~AGsdisaCGPaiGl~~DvT~ 498 (709)
T TIGR02632 419 EKELARRVAFVTGGASGIGRETARRLVDEGAHVVLADLDAEAAEAVAAEIVDKFGADKAVAGSDISACGPAIGLKLDVTD 498 (709)
T ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEECCCCHHCCCCCEEEEEEECC
T ss_conf 96715706889738865268999999736977999623657899999998631388812114320004671002763175
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEECCH
Q ss_conf 99999999999998189879987687588888867659-999999999998999999999999998608-9869997883
Q gi|254780337|r 79 SNALELTKTYIAKRWGKLDILIANAGILGSISPIWQIK-EKSFADVISVNVMANWNIMRSFDPWLKKSH-CGRAIILSSG 156 (257)
Q Consensus 79 ~~~v~~~~~~~~~~~g~iDilVNNAGi~~~~~~~~~~~-~e~~~~~~~vNl~g~~~l~~~~~~~m~~~~-~G~IInisS~ 156 (257)
T Consensus 499 e~~v~~~f~~v~~~yGGvD~vv~nAGi~~S-~p~~~t~r~~~W~l~~di~atG~FLVareA~r~~~~Q~lGG~~VfiaSk 577 (709)
T TIGR02632 499 EEAVKAAFAEVALAYGGVDIVVNNAGIAVS-SPLEETERLEEWDLNLDILATGYFLVAREAARLMRKQGLGGNIVFIASK 577 (709)
T ss_pred HHHHHHHHHHHHHHHCCEEEEEECCCHHCC-CCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCE
T ss_conf 899999999999974984787652530105-7702322155432012010120035888999999731798556776110
Q ss_pred HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCC--CHHHHHH----------CC-------------
Q ss_conf 5647889836889899999999999999854438699755328837--9779844----------14-------------
Q gi|254780337|r 157 AAYKCRPLWGAYSASKAAIEALARTWSKETVNTALRVINIDPGPTR--TSMRAKA----------MP------------- 211 (257)
Q Consensus 157 ~g~~~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrvn~I~PG~v~--T~m~~~~----------~~------------- 211 (257)
T Consensus 578 Nav~A~kn~~AY~aaKA~~~Hl~R~LA~Ela~~GiRVNtV~PdaVl~GS~if~~~W~~~raA~ygi~ftadePtdvl~d~ 657 (709)
T TIGR02632 578 NAVVAGKNASAYSAAKAAEAHLARCLAAELAELGIRVNTVNPDAVLRGSGIFDGEWREERAAAYGIPFTADEPTDVLADK 657 (709)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 00111788405558999999899999981478864640106500110552153367888887707743468723578888
Q ss_pred --CC-----CCCCCCCHHHHHHHHHHHHCHHH-CCCCCEEEECCCCEE
Q ss_conf --44-----32458888999999999619756-266857987687631
Q gi|254780337|r 212 --AE-----DPNTVPHPQKVAKIISFLCATQK-IETGKLFSVPQNRFV 251 (257)
Q Consensus 212 --~~-----~~~~~~~pediA~~v~fL~s~~~-~~tG~~~~vdgG~~~ 251 (257)
T Consensus 658 L~~fY~~RslLk~~v~p~d~AeAvf~L~S~~~~~tTG~~i~VDaG~~~ 705 (709)
T TIGR02632 658 LEEFYAKRSLLKREVLPADIAEAVFFLASDKLEKTTGLIITVDAGVAA 705 (709)
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCC
T ss_conf 988987543237766808899999997345101027866403777522