HHsearch alignment for GI: 254780337 and conserved domain: cd05294
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=94.90 E-value=0.2 Score=29.69 Aligned_cols=110 Identities=19% Similarity=0.244 Sum_probs=65.3
Q ss_pred EEEECCCCHHHHHHHHHHHHCCC--EEEEEECCH--HHHHHHHHHHHHC----CCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 99938998688999999998899--899997898--9999999999864----992899987899999999999999998
Q gi|254780337|r 21 ALVTGSSRGIGYYTALELARSGA--YVIACGRSI--SQLEKLKNALQKI----NKKIDIFAFDLRDSNALELTKTYIAKR 92 (257)
Q Consensus 21 alVTGas~GIG~a~a~~la~~G~--~Vi~~~r~~--~~l~~~~~~~~~~----g~~~~~~~~Dv~d~~~v~~~~~~~~~~ 92 (257)
T Consensus 3 V~IiGAaG~VG~~~a~~l~~~~~~~el~LiD~~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~--~d-----------~~~ 69 (309)
T cd05294 3 VSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKIS--SD-----------LSD 69 (309)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEHHHHCCCCCCCCCCEEEEC--CC-----------HHH
T ss_conf 99999997699999999983799875999605564342311235545034336887679827--98-----------899
Q ss_pred HCCCCEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEC
Q ss_conf 1898799876875888888676599999999999989999999999999986089-8699978
Q gi|254780337|r 93 WGKLDILIANAGILGSISPIWQIKEKSFADVISVNVMANWNIMRSFDPWLKKSHC-GRAIILS 154 (257)
Q Consensus 93 ~g~iDilVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~~~~~~m~~~~~-G~IInis 154 (257)
T Consensus 70 ~~daDivVitAG~~rk--~--g~tR~---dLl~~Na~----I~~~i~~~i~~~~p~~ivivvt 121 (309)
T cd05294 70 VAGSDIVIITAGVPRK--E--GMSRL---DLAKKNAK----IVKKYAKQIAEFAPDTKILVVT 121 (309)
T ss_pred HCCCCEEEECCCCCCC--C--CCCHH---HHHHHHHH----HHHHHHHHHHCCCCCEEEEECC
T ss_conf 6899999987898899--5--99878---99998999----9999998764269984999768