HHsearch alignment for GI: 254780337 and conserved domain: pfam02719
>pfam02719 Polysacc_synt_2 Polysaccharide biosynthesis protein. This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI).
Probab=99.68 E-value=4.3e-14 Score=114.39 Aligned_cols=212 Identities=18% Similarity=0.207 Sum_probs=153.7
Q ss_pred EEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHC--CCCEEEEECCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 99938998688999999998899-8999978989999999999864--99289998789999999999999999818987
Q gi|254780337|r 21 ALVTGSSRGIGYYTALELARSGA-YVIACGRSISQLEKLKNALQKI--NKKIDIFAFDLRDSNALELTKTYIAKRWGKLD 97 (257)
Q Consensus 21 alVTGas~GIG~a~a~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 97 (257)
T Consensus 1 ILVTGGaGFIGS~Lv~~Ll~~g~~~v~v~d~~~~~~~~~~~~l~~~~~~~~~~~~~~DI~D~~~l~~~~~----~~-~~D 75 (280)
T pfam02719 1 VLVTGGGGSIGSELCRQILKFNPKKIILFSRDEFKLYEIEQELREEYNDPKLRFFIGDVRDRERLERAME----EY-GVD 75 (280)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH----HC-CCC
T ss_conf 7997488679999999999689988999908874277899998862678983899811689899999987----54-999
Q ss_pred EEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 99876875888888676599999999999989999999999999986089869997883564788983688989999999
Q gi|254780337|r 98 ILIANAGILGSISPIWQIKEKSFADVISVNVMANWNIMRSFDPWLKKSHCGRAIILSSGAAYKCRPLWGAYSASKAAIEA 177 (257)
Q Consensus 98 ilVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~~~~~~m~~~~~G~IInisS~~g~~~~~~~~~Y~asKaal~~ 177 (257)
T Consensus 76 ~V~HlAA~~-~V~~----s~~~P~~~~~~Nv~gT~nlLe~a~~----~~vk~~v~~STd~a~~P---~s~Yg~sK~~~E~ 143 (280)
T pfam02719 76 TVFHAAALK-HVPL----VEYNPMEAIKTNVLGTENVAEAAIE----NGVEKFVLISTDKAVNP---TNVMGATKRLAEK 143 (280)
T ss_pred EEEECHHHC-CCCC----HHHCHHHHHHHHHHHHHHHHHHHHH----CCCCEEECCCCCCCCCC---CCCCCCCHHHHHH
T ss_conf 999810311-6532----7669999998872777999988885----39624551476644569---9845423777899
Q ss_pred HHHHHHHHHHHHCCEEEEECCCCCCCH-------HHHHHCCCCC--------CCCCCCHHHHHHHHHHHHCHHHCCCCCE
Q ss_conf 999999985443869975532883797-------7984414443--------2458888999999999619756266857
Q gi|254780337|r 178 LARTWSKETVNTALRVINIDPGPTRTS-------MRAKAMPAED--------PNTVPHPQKVAKIISFLCATQKIETGKL 242 (257)
Q Consensus 178 lt~~la~E~~~~gIrvn~I~PG~v~T~-------m~~~~~~~~~--------~~~~~~pediA~~v~fL~s~~~~~tG~~ 242 (257)
T Consensus 144 l~~~y~~~~~~~~~~~~~lR~fNVyGprgsVIp~Fi~~~~~~~pi~I~dg~qtRdf~~V~D~v~~~l~a~~--~~~~gei 221 (280)
T pfam02719 144 LFQAANRESGSGKTRFSAVRFGNVLGSRGSVIPLFKKQIAEGGPVTVTHPDMTRFFMTIPEAVQLVLQAGA--MGKGGEI 221 (280)
T ss_pred HHHHHHHHHCCCCCEEEEEEECCEECCCCCCHHHHHHHHHCCCCEEECCCCCEEEEEEHHHHHHHHHHHHH--HCCCCCE
T ss_conf 99999997199985489875445028997709999999985998656599843855879999999999997--2877867
Q ss_pred EEECCCCEE
Q ss_conf 987687631
Q gi|254780337|r 243 FSVPQNRFV 251 (257)
Q Consensus 243 ~~vdgG~~~ 251 (257)
T Consensus 222 fnig~g~~~ 230 (280)
T pfam02719 222 FVLDMGEPV 230 (280)
T ss_pred EECCCCCCE
T ss_conf 888899866