BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780338|ref|YP_003064751.1| hypothetical protein
CLIBASIA_01115 [Candidatus Liberibacter asiaticus str. psy62]
(129 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780338|ref|YP_003064751.1| hypothetical protein CLIBASIA_01115 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040015|gb|ACT56811.1| hypothetical protein CLIBASIA_01115 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 129
Score = 258 bits (658), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 129/129 (100%), Positives = 129/129 (100%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW
Sbjct: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFD 120
SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFD
Sbjct: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFD 120
Query: 121 NPTFYQLLN 129
NPTFYQLLN
Sbjct: 121 NPTFYQLLN 129
>gi|284007427|emb|CBA72860.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 151
Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/97 (81%), Positives = 86/97 (88%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MIGIGFLFNLI GI QRHYSI+I +ITTC+ ATRQVLIHILPGD GY VFG+HLYTW
Sbjct: 53 MIGIGFLFNLILGINQRHYSIIIFSSITTCMTATRQVLIHILPGDPGYYSTVFGLHLYTW 112
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYL 97
SL+FSL IILFISVLMLF+TAEI+VAKSP REIAIYL
Sbjct: 113 SLLFSLAIILFISVLMLFNTAEIQVAKSPAREIAIYL 149
>gi|37524258|ref|NP_927602.1| hypothetical protein plu0239 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36783681|emb|CAE12534.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 189
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MIG GFLFNL GIK HY + ++G + T I+A RQV +HI PGDLGY +FG+H YTW
Sbjct: 56 MIGFGFLFNLCFGIKSAHYGLSLIGCVVTGIVAIRQVFLHITPGDLGYGSALFGIHFYTW 115
Query: 61 SLIFSLVIILFISVLM----LFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
+LI S++ I+ ISV++ L T E K S + +I I LFV LI AN ISTILECG
Sbjct: 116 ALICSVIAIIGISVMLILKSLEKTTEEKQKTSAIGQIIIGLFVILITANLISTILECGGG 175
Query: 117 QCFDNPTFYQLLN 129
QC DNPTFYQLL
Sbjct: 176 QCDDNPTFYQLLG 188
>gi|253987664|ref|YP_003039020.1| hypothetical protein PAU_00181 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211638571|emb|CAR67191.1| putative membrane protein [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253779114|emb|CAQ82274.1| putative membrane protein [Photorhabdus asymbiotica]
Length = 189
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 92/133 (69%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MIG GFLFNL GIK HY I ++G I T IIA RQV +HILPGD+GY +FG+H YTW
Sbjct: 56 MIGFGFLFNLRFGIKSAHYGIALIGCIVTGIIAIRQVFLHILPGDIGYGSALFGIHFYTW 115
Query: 61 SLIFSLVIILFISVLMLFDTAEI---KVAKSPV-REIAIYLFVFLIFANFISTILECGLT 116
+L+ S++ I+ ISV+++ + E + +PV +I I FV LI AN IST+LECG
Sbjct: 116 ALLSSVIAIIAISVMLILKSLEKTTEEKGNTPVFGQILIGFFVLLITANLISTVLECGGG 175
Query: 117 QCFDNPTFYQLLN 129
QC DNPTFYQLL
Sbjct: 176 QCDDNPTFYQLLG 188
>gi|300724708|ref|YP_003714033.1| hypothetical protein XNC1_3917 [Xenorhabdus nematophila ATCC 19061]
gi|297631250|emb|CBJ91945.1| conserved hypothetical protein; putative membrane protein
[Xenorhabdus nematophila ATCC 19061]
Length = 188
Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 86/132 (65%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MIG GFLFN+ GIK HYS+ I G + T +A RQV +HILPGD GY FG+H YTW
Sbjct: 56 MIGFGFLFNIYFGIKNAHYSLSIFGCLVTGFVAMRQVSLHILPGDTGYGSTFFGLHFYTW 115
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ I S++ I+ I+V+M AK + +IA+ LF FLI AN +STILECG Q
Sbjct: 116 AAILSILTIIAIAVIMPLKAGNTDSAKCTPPALGKIAMGLFAFLIAANLVSTILECGGGQ 175
Query: 118 CFDNPTFYQLLN 129
C DNPTFYQLL
Sbjct: 176 CDDNPTFYQLLQ 187
>gi|290476875|ref|YP_003469786.1| hypothetical protein XBJ1_3906 [Xenorhabdus bovienii SS-2004]
gi|289176219|emb|CBJ83024.1| conserved hypothetical protein; putative membrane protein
[Xenorhabdus bovienii SS-2004]
Length = 184
Score = 133 bits (334), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 89/132 (67%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MIG+GFLFN+ GIK HYS+ +LG + T IA RQV +HILPGD GY G+H YTW
Sbjct: 52 MIGLGFLFNIYFGIKNAHYSLSLLGCLVTGFIAMRQVSLHILPGDTGYGSTFLGLHFYTW 111
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK-SP--VREIAIYLFVFLIFANFISTILECGLTQ 117
+ + S++ I+ I+V+M ++ +P + +IA+ LF FLI AN +ST+LECG Q
Sbjct: 112 AAVLSILTIIAIAVIMPLKAGNSDSSRYTPPTLGKIAMGLFAFLIAANLVSTVLECGSGQ 171
Query: 118 CFDNPTFYQLLN 129
C DNPTFYQLL
Sbjct: 172 CDDNPTFYQLLK 183
>gi|238919044|ref|YP_002932558.1| hypothetical protein NT01EI_1112 [Edwardsiella ictaluri 93-146]
gi|238868612|gb|ACR68323.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 189
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 87/133 (65%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+IG GFLFN+ GIK HY I ++G + T IA RQ+ +HILPGD GY +H YTW
Sbjct: 56 LIGFGFLFNVRFGIKGAHYGIALIGCVITGSIAARQMFLHILPGDSGYGSTFLELHFYTW 115
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKS---PV-REIAIYLFVFLIFANFISTILECGLT 116
+L+ S+++I+ I+V+M+ ++ P+ +IAI LF +I AN IST+LECG
Sbjct: 116 ALLASIIVIVAIAVMMMLGEVRPTTGETISVPLWGKIAIALFALVIVANLISTVLECGGG 175
Query: 117 QCFDNPTFYQLLN 129
QC DNPTFYQL+
Sbjct: 176 QCADNPTFYQLIG 188
>gi|240851132|ref|YP_002972534.1| hypothetical membrane protein [Bartonella grahamii as4aup]
gi|240268255|gb|ACS51843.1| hypothetical membrane protein [Bartonella grahamii as4aup]
Length = 191
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 83/133 (62%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFL N+ +K HY ++ILG + T +A RQV +HI P DLGY FG+H YTW
Sbjct: 54 LAGCGFLLNIHHKVKNTHYGMVILGCMVTSAVAARQVFLHITPDDLGYGSTFFGLHFYTW 113
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK-SP---VREIAIYLFVFLIFANFISTILECGLT 116
+ I S++ I +S +M+ K + SP + + A +LFVFLI AN ISTILECG
Sbjct: 114 AFIISVLCIFAVSFVMILGELAHKFKEFSPFPFLSKTASFLFVFLIAANLISTILECGGG 173
Query: 117 QCFDNPTFYQLLN 129
QC D+P Y+LL+
Sbjct: 174 QCADDPVRYELLS 186
>gi|292486979|ref|YP_003529849.1| hypothetical protein EAMY_0491 [Erwinia amylovora CFBP1430]
gi|292900634|ref|YP_003540003.1| disulfide bond formation membrane protein [Erwinia amylovora ATCC
49946]
gi|291200482|emb|CBJ47611.1| putative disulfide bond formation membrane protein [Erwinia
amylovora ATCC 49946]
gi|291552396|emb|CBA19441.1| hypothetical protein EAMY_0491 [Erwinia amylovora CFBP1430]
Length = 183
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 83/125 (66%), Gaps = 3/125 (2%)
Query: 8 FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67
FNL G ++ HY ++I GA+ +ATR V +HI+PGD GY +P G+HLYTWSLI ++
Sbjct: 59 FNLYFGNRKLHYGMVIFGALALATVATRHVFLHIMPGDTGYGLPFLGIHLYTWSLILAVA 118
Query: 68 IILFISVLMLF--DTAEIKVA-KSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124
+I ++V ++ D A V KS ++I + ++ ++ AN +ST+L+CG QC DNPT+
Sbjct: 119 LIFGVAVTLMITPDAATPSVVNKSITQKILMIIYALIVVANLLSTVLQCGGGQCDDNPTY 178
Query: 125 YQLLN 129
YQLL
Sbjct: 179 YQLLK 183
>gi|49476082|ref|YP_034123.1| hypothetical protein BH14180 [Bartonella henselae str. Houston-1]
gi|49238890|emb|CAF28183.1| hypothetical protein BH14180 [Bartonella henselae str. Houston-1]
Length = 193
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 83/133 (62%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFL N+ +K HY ++ILG + T I+A RQV +HI P DLGY FG+H YTW
Sbjct: 54 LAGCGFLLNIHHKVKNTHYGMVILGCMVTSIVAARQVFLHITPDDLGYGSTFFGLHFYTW 113
Query: 61 SLIFSLVIILFISVLMLFDTAEIK---VAKSP-VREIAIYLFVFLIFANFISTILECGLT 116
+ I +++ I ++ LM+ K A P + ++A LFVFLI AN IST+LECG
Sbjct: 114 AFIIAVLCIFAVAFLMILSELSYKFKVFAPFPLLSKMASGLFVFLIAANLISTVLECGTG 173
Query: 117 QCFDNPTFYQLLN 129
QC D+P Y+LL+
Sbjct: 174 QCADDPVRYELLS 186
>gi|310766387|gb|ADP11337.1| hypothetical protein EJP617_16560 [Erwinia sp. Ejp617]
Length = 183
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 82/125 (65%), Gaps = 3/125 (2%)
Query: 8 FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67
FNL G ++ HY ++I+GA+ +ATR V +HI PGD GY +P G+HLYTWSLI ++
Sbjct: 59 FNLYFGNRKLHYGMVIIGALALAAVATRHVFLHITPGDTGYGLPFLGIHLYTWSLILAVA 118
Query: 68 IILFISVLMLF--DTAEIK-VAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124
II+ ++V ++ D A V KS ++ + +F ++ AN ST+L+CG QC DNPT+
Sbjct: 119 IIIGVAVTLMITPDAATAPIVHKSLTQKCLMVIFALMMVANLASTVLQCGGGQCDDNPTY 178
Query: 125 YQLLN 129
YQLL
Sbjct: 179 YQLLK 183
>gi|312171047|emb|CBX79306.1| hypothetical protein EAIL5_0486 [Erwinia amylovora ATCC BAA-2158]
Length = 183
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 83/125 (66%), Gaps = 3/125 (2%)
Query: 8 FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67
FNL G ++ HY ++I GA+ +ATR V +HI+PGD GY +P G+HLYTWSLI ++
Sbjct: 59 FNLYFGNRKLHYGMVIFGALALATVATRHVFLHIMPGDTGYGLPFLGIHLYTWSLILAVA 118
Query: 68 IILFISV-LMLFDTAEIK--VAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124
+I+ ++V LM+ A V KS +I + ++ ++ AN +ST+L+CG QC DNPT+
Sbjct: 119 LIIGVAVTLMITPDAGTPYVVNKSITEKILMIIYALIMVANLLSTVLQCGGGQCDDNPTY 178
Query: 125 YQLLN 129
YQLL
Sbjct: 179 YQLLK 183
>gi|49474631|ref|YP_032673.1| hypothetical protein BQ11210 [Bartonella quintana str. Toulouse]
gi|49240135|emb|CAF26582.1| hypothetical protein BQ11210 [Bartonella quintana str. Toulouse]
Length = 193
Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 83/133 (62%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFLFN+ +K HY ++ILG + T ++A RQV +HI P DLGY FG+H YTW
Sbjct: 54 LAGCGFLFNIHHKVKNTHYGMVILGCMVTSVVAARQVFLHITPDDLGYGSTFFGLHFYTW 113
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK-SPV---REIAIYLFVFLIFANFISTILECGLT 116
+ + +++ I ++ +M+ K SP+ A +LF+FLI AN +ST+LECG
Sbjct: 114 AFLIAVLCIFAVTFIMILSELAHKFKVFSPIPLLSGAASFLFIFLIAANLVSTVLECGGG 173
Query: 117 QCFDNPTFYQLLN 129
QC D+P Y+LL+
Sbjct: 174 QCADDPVRYELLS 186
>gi|163868988|ref|YP_001610218.1| disulfide bond formation protein B [Bartonella tribocorum CIP
105476]
gi|161018665|emb|CAK02223.1| disulfide bond formation protein B [Bartonella tribocorum CIP
105476]
Length = 193
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFL N+ +K HY ++I+G + T +A RQV +HI P DLGY FG+H YTW
Sbjct: 54 LAGCGFLLNIHHKVKNTHYGMVIIGCMVTSAVAARQVFLHITPDDLGYGSTFFGLHFYTW 113
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSP----VREIAIYLFVFLIFANFISTILECGLT 116
+ I S++ I ++ +M+ K + + + A +LFVFLI AN ISTILECG
Sbjct: 114 AFIISVLCIFAVASVMILGELAHKFKEFSAFPILSKTASFLFVFLIAANLISTILECGGG 173
Query: 117 QCFDNPTFYQLLN 129
QC D+P Y+LL+
Sbjct: 174 QCADDPVRYELLS 186
>gi|259909747|ref|YP_002650103.1| hypothetical protein EpC_31220 [Erwinia pyrifoliae Ep1/96]
gi|224965369|emb|CAX56901.1| putative membrane protein [Erwinia pyrifoliae Ep1/96]
Length = 183
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 81/125 (64%), Gaps = 3/125 (2%)
Query: 8 FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67
FNL G ++ HY ++I+GA+ +ATR V +HI PGD GY +P G+HLYTWSLI ++
Sbjct: 59 FNLYFGNRKLHYGMVIIGALALAAVATRHVFLHITPGDTGYGLPFLGIHLYTWSLILAVA 118
Query: 68 IILFISVLMLF--DTAEIKVA-KSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124
II+ ++V ++ D A V KS + + ++ ++ AN ST+L+CG QC DNPT+
Sbjct: 119 IIIGVAVTLMITPDAATAPVVIKSFTQRFLMIIYALILVANLSSTVLQCGGGQCDDNPTY 178
Query: 125 YQLLN 129
YQLL
Sbjct: 179 YQLLK 183
>gi|283479837|emb|CAY75753.1| hypothetical protein EPYR_03373 [Erwinia pyrifoliae DSM 12163]
Length = 211
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 81/125 (64%), Gaps = 3/125 (2%)
Query: 8 FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67
FNL G ++ HY ++I+GA+ +ATR V +HI PGD GY +P G+HLYTWSLI ++
Sbjct: 87 FNLYFGNRKLHYGMVIIGALALAAVATRHVFLHITPGDTGYGLPFLGIHLYTWSLILAVA 146
Query: 68 IILFISVLMLF--DTAEIKVA-KSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124
II+ ++V ++ D A V KS + + ++ ++ AN ST+L+CG QC DNPT+
Sbjct: 147 IIIGVAVTLMITPDAATAPVVIKSFTQRFLMIIYALILVANLSSTVLQCGGGQCDDNPTY 206
Query: 125 YQLLN 129
YQLL
Sbjct: 207 YQLLK 211
>gi|311108230|ref|YP_003981083.1| disulfide bond formation protein B [Achromobacter xylosoxidans A8]
gi|310762919|gb|ADP18368.1| disulfide bond formation protein B [Achromobacter xylosoxidans A8]
Length = 190
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 77/133 (57%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G+GFL N+ G HY++ I GA+ + + RQVL+HI PGD GY P+ G+H YTW
Sbjct: 53 LAGMGFLLNMRLGPSPLHYAMSIAGALGGLLASGRQVLLHIAPGDPGYGSPLLGLHFYTW 112
Query: 61 SLIFSLVIILFISVLMLFDTA-EIKVAKSPVREIAI---YLFVFLIFANFISTILECGLT 116
+ I + II+F +V++ D + + PV + + LF + AN ST LECG
Sbjct: 113 AFIAFIAIIVFCTVMLAVDRKWGDNMLRKPVSVLGVLVMALFFLMALANVGSTTLECGFG 172
Query: 117 QCFDNPTFYQLLN 129
C DNPT YQ LN
Sbjct: 173 PCPDNPTSYQWLN 185
>gi|198243055|ref|YP_002215275.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|197937571|gb|ACH74904.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|326623020|gb|EGE29365.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
Length = 204
Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 88/131 (67%), Gaps = 4/131 (3%)
Query: 3 GIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSL 62
G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW+L
Sbjct: 55 GFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTL 114
Query: 63 IFSLVIILFISVLMLFDTAEIKVAK---SPVR-EIAIYLFVFLIFANFISTILECGLTQC 118
I S++II+ ++V++ + + +PV I ++F+ LI AN IST+LECG +C
Sbjct: 115 ITSILIIIAVAVVLAISSMNVAFRSLNINPVLFSIVGWVFLLLITANLISTVLECGGGEC 174
Query: 119 FDNPTFYQLLN 129
NP Y+LL+
Sbjct: 175 AANPVTYKLLS 185
>gi|148974191|ref|ZP_01811724.1| hypothetical protein VSWAT3_13727 [Vibrionales bacterium SWAT-3]
gi|145965888|gb|EDK31136.1| hypothetical protein VSWAT3_13727 [Vibrionales bacterium SWAT-3]
Length = 179
Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GF+ N++ G + RHY I+++GA+ + RQV +H++PG GY P+FGMH YTW
Sbjct: 48 MVAFGFMLNVVYGPQPRHYGIVLIGALYGVATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + IL ++V+++ E S + +A L + ++ N I+T +ECG Q
Sbjct: 108 AFVLFAATILAVAVILILTNKEPSQEAYKMSNLGRVACLLAIVVVALNAIATFVECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y LLN
Sbjct: 168 CPDNPVSYWLLN 179
>gi|194442392|ref|YP_002041129.1| hypothetical protein SNSL254_A2020 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|205357369|ref|ZP_03223727.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|207856629|ref|YP_002243280.1| hypothetical protein SEN1172 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|194401055|gb|ACF61277.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|205322135|gb|EDZ09974.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|206708432|emb|CAR32753.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
Length = 206
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 86/131 (65%), Gaps = 4/131 (3%)
Query: 3 GIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSL 62
G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW+L
Sbjct: 57 GFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTL 116
Query: 63 IFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLTQC 118
I S++II+ ++V++ + + + I ++F+ LI AN IST+LECG +C
Sbjct: 117 ITSILIIIAVAVVLAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGEC 176
Query: 119 FDNPTFYQLLN 129
NP Y+LL+
Sbjct: 177 AANPVTYKLLS 187
>gi|170737007|ref|YP_001778267.1| hypothetical protein Bcenmc03_4643 [Burkholderia cenocepacia MC0-3]
gi|169819195|gb|ACA93777.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3]
Length = 195
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 80/133 (60%), Gaps = 5/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ GIGF N+ GI+ HY +++ A+ T +IA RQVL+HI P Y ++G+H YTW
Sbjct: 59 LAGIGFAMNIRYGIRGTHYCCVLVSAVATGVIAGRQVLLHISPDSGAYGSALWGLHFYTW 118
Query: 61 SLIFSLVIILFISVLMLF----DTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
I S++IIL++S+L+ DT + + S IA+ +F I AN +ST+LECG
Sbjct: 119 CFIASVLIILYVSLLLAVRRTNDTVQ-PASMSTSGRIAMAVFGLTIIANLVSTLLECGGG 177
Query: 117 QCFDNPTFYQLLN 129
QC +P Y+LL
Sbjct: 178 QCASDPVEYELLE 190
>gi|205352473|ref|YP_002226274.1| hypothetical protein SG1250 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205272254|emb|CAR37130.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326627529|gb|EGE33872.1| Putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 204
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 86/131 (65%), Gaps = 4/131 (3%)
Query: 3 GIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSL 62
G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW+L
Sbjct: 55 GFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTL 114
Query: 63 IFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLTQC 118
I S++II+ ++V++ + + + I ++F+ LI AN IST+LECG +C
Sbjct: 115 ITSILIIIAVAVVLAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGEC 174
Query: 119 FDNPTFYQLLN 129
NP Y+LL+
Sbjct: 175 AANPVTYKLLS 185
>gi|200390522|ref|ZP_03217133.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199602967|gb|EDZ01513.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 204
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 86/131 (65%), Gaps = 4/131 (3%)
Query: 3 GIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSL 62
G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW+L
Sbjct: 55 GFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTL 114
Query: 63 IFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLTQC 118
I S++II+ ++V++ + + + I ++F+ LI AN IST+LECG +C
Sbjct: 115 ITSILIIIAVAVVLAISSMNVAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGGEC 174
Query: 119 FDNPTFYQLLN 129
NP Y+LL+
Sbjct: 175 AANPVTYKLLS 185
>gi|320085627|emb|CBY95405.1| hypothetical protein SENTW_1325 [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 204
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 85/131 (64%), Gaps = 4/131 (3%)
Query: 3 GIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSL 62
G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW+L
Sbjct: 55 GFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTL 114
Query: 63 IFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLTQC 118
I S++II+ ++V++ + + I ++F+ LI AN IST+LECG +C
Sbjct: 115 ITSILIIIAVAVVLAISSMNAAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGGEC 174
Query: 119 FDNPTFYQLLN 129
NP Y+LL+
Sbjct: 175 AANPVTYKLLS 185
>gi|16760750|ref|NP_456367.1| hypothetical protein STY2002 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29141492|ref|NP_804834.1| hypothetical protein t1014 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213163491|ref|ZP_03349201.1| hypothetical protein Salmoneentericaenterica_27100 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213424177|ref|ZP_03357042.1| hypothetical protein SentesTyphi_00330 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213581983|ref|ZP_03363809.1| hypothetical protein SentesTyph_12584 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213609962|ref|ZP_03369788.1| hypothetical protein SentesTyp_05317 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213648148|ref|ZP_03378201.1| hypothetical protein SentesTy_13194 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213857347|ref|ZP_03384318.1| hypothetical protein SentesT_19425 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289825633|ref|ZP_06544810.1| hypothetical protein Salmonellentericaenterica_09396 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|25513171|pir||AH0730 probable membrane protein STY2002 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16503047|emb|CAD05546.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137119|gb|AAO68683.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 204
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 85/131 (64%), Gaps = 4/131 (3%)
Query: 3 GIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSL 62
G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW+L
Sbjct: 55 GFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTL 114
Query: 63 IFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLTQC 118
I S++II+ ++V++ + + I ++F+ LI AN IST+LECG +C
Sbjct: 115 ITSILIIIAVAVVLAISSMNAAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGGEC 174
Query: 119 FDNPTFYQLLN 129
NP Y+LL+
Sbjct: 175 AANPVTYKLLS 185
>gi|170735271|ref|YP_001774385.1| hypothetical protein Bcenmc03_6778 [Burkholderia cenocepacia MC0-3]
gi|169821309|gb|ACA95890.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3]
Length = 195
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 78/134 (58%), Gaps = 7/134 (5%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ GIGF N+ GI+ HY +++ A+ T +IA RQVL+HI P Y ++G+H YTW
Sbjct: 59 LAGIGFAMNVRYGIRGTHYCCVLVSAVATGVIAGRQVLLHISPDSGAYGSALWGLHFYTW 118
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVR-----EIAIYLFVFLIFANFISTILECGL 115
I S++IIL++S+L+ V PV IA+ +F I AN +ST+LECG
Sbjct: 119 CFIASVLIILYVSLLLAVRRTSHTV--QPVSMTTGGRIAMAVFGLTIIANLVSTLLECGG 176
Query: 116 TQCFDNPTFYQLLN 129
QC +P Y+LL
Sbjct: 177 GQCESDPVAYELLE 190
>gi|56413218|ref|YP_150293.1| hypothetical protein SPA1008 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362143|ref|YP_002141780.1| hypothetical protein SSPA0940 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56127475|gb|AAV76981.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197093620|emb|CAR59089.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 204
Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 85/131 (64%), Gaps = 4/131 (3%)
Query: 3 GIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSL 62
G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW+L
Sbjct: 55 GFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQMCLHIMPGDTGYGSAFFGLHFYTWTL 114
Query: 63 IFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLTQC 118
I S++II+ ++V++ + + I ++F+ LI AN IST+LECG +C
Sbjct: 115 ITSILIIIAVAVVLAISSMNAAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGGEC 174
Query: 119 FDNPTFYQLLN 129
NP Y+LL+
Sbjct: 175 AANPVTYKLLS 185
>gi|84386571|ref|ZP_00989598.1| hypothetical protein V12B01_17856 [Vibrio splendidus 12B01]
gi|84378676|gb|EAP95532.1| hypothetical protein V12B01_17856 [Vibrio splendidus 12B01]
Length = 183
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 78/135 (57%), Gaps = 9/135 (6%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GF+ N++ G + RHY ++++GA+ + RQV +H++PG GY P+ GMH YTW
Sbjct: 48 MVAFGFMLNVVYGPQSRHYGVILIGALYGVATSLRQVSLHVIPGTPGYGSPILGMHYYTW 107
Query: 61 SLIFSLVIILFISV-LMLFDTAEIKVAKSPVR-----EIAIYLFVFLIFANFISTILECG 114
+ + + IL +SV LML + E + P + I L + ++ N I+T +ECG
Sbjct: 108 AFVLFVATILAVSVILMLTNKTE---SHEPYKMGNFGRIVCLLAIAVVALNAIATFVECG 164
Query: 115 LTQCFDNPTFYQLLN 129
QC DNP Y LLN
Sbjct: 165 PYQCPDNPVSYWLLN 179
>gi|269962996|ref|ZP_06177333.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832239|gb|EEZ86361.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 179
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MI GFL N++ G + RHY ++++GA+ + RQV +H++PG GY P+FGMH YTW
Sbjct: 48 MIMFGFLLNVVYGPRSRHYGVVLIGALYGVATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + + I ++V+++ + E S + I L + ++ N I T ECG Q
Sbjct: 108 AFVLFVATIFAVAVILMLTSKEESPEPYEMSNLGRITCLLAISVVALNVIGTFAECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y L N
Sbjct: 168 CPDNPESYWLFN 179
>gi|90580939|ref|ZP_01236740.1| hypothetical protein VAS14_20796 [Vibrio angustum S14]
gi|90437817|gb|EAS63007.1| hypothetical protein VAS14_20796 [Vibrio angustum S14]
Length = 182
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GF+ N++ G +QRHY ++++GA+ A RQV +H++PG G+ P+ GMH YTW
Sbjct: 48 MVMFGFMLNVVYGTQQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFA---NFISTILECGLTQ 117
+ + + I +++L+L E + + ++ + I A N IST LECG Q
Sbjct: 108 AFVIFAMAIAGVALLLLLWNKEWTSENYQMNKFGKFVCILAIVAVLINVISTFLECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y LL+
Sbjct: 168 CPDNPVSYWLLD 179
>gi|209809797|ref|YP_002265336.1| membrane protein [Aliivibrio salmonicida LFI1238]
gi|208011360|emb|CAQ81816.1| membrane protein [Aliivibrio salmonicida LFI1238]
Length = 182
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GF+ N+I G +QRHY ++++GA+ A RQV +H++PG G+ P+ GMH YTW
Sbjct: 48 MVMFGFMLNIIYGTQQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLF---DTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + ++ I+ ++VL++ D + + + A L + + N +ST +ECG Q
Sbjct: 108 AFVIFMMAIVGVAVLLMLWNNDWSTDTYQMNAFGKFACVLAIVAVLVNVLSTFVECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y LL+
Sbjct: 168 CPDNPVSYWLLD 179
>gi|205358999|ref|ZP_03224187.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205339493|gb|EDZ26257.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
Length = 206
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 86/131 (65%), Gaps = 4/131 (3%)
Query: 3 GIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSL 62
G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW+L
Sbjct: 57 GFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTL 116
Query: 63 IFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLTQC 118
I S++II+ ++V++ + + + I ++F+ LI AN IST+LECG +C
Sbjct: 117 ITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGEC 176
Query: 119 FDNPTFYQLLN 129
NP Y+LL+
Sbjct: 177 AANPVTYKLLS 187
>gi|194738032|ref|YP_002114899.1| hypothetical protein SeSA_A2012 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197301067|ref|ZP_03166277.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194713534|gb|ACF92755.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197288641|gb|EDY28016.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
Length = 206
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 86/131 (65%), Gaps = 4/131 (3%)
Query: 3 GIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSL 62
G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW+L
Sbjct: 57 GFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTL 116
Query: 63 IFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLTQC 118
I S++II+ ++V++ + + + I ++F+ LI AN IST+LECG +C
Sbjct: 117 ITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGEC 176
Query: 119 FDNPTFYQLLN 129
NP Y+LL+
Sbjct: 177 AANPVTYKLLS 187
>gi|168259875|ref|ZP_02681848.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|205350713|gb|EDZ37344.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
Length = 204
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 86/131 (65%), Gaps = 4/131 (3%)
Query: 3 GIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSL 62
G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW+L
Sbjct: 55 GFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTL 114
Query: 63 IFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLTQC 118
I S++II+ ++V++ + + + I ++F+ LI AN IST+LECG +C
Sbjct: 115 ITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGEC 174
Query: 119 FDNPTFYQLLN 129
NP Y+LL+
Sbjct: 175 AANPVTYKLLS 185
>gi|16765205|ref|NP_460820.1| inner membrane protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167993831|ref|ZP_02574924.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168462619|ref|ZP_02696550.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|194451478|ref|YP_002045916.1| hypothetical protein SeHA_C2074 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197261831|ref|ZP_03161905.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|204931001|ref|ZP_03221827.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|16420398|gb|AAL20779.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|194409782|gb|ACF70001.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|195634091|gb|EDX52443.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197240086|gb|EDY22706.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|204320045|gb|EDZ05250.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205328218|gb|EDZ14982.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|267993834|gb|ACY88719.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301158386|emb|CBW17889.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912858|dbj|BAJ36832.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321224505|gb|EFX49568.1| Putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322616860|gb|EFY13768.1| hypothetical protein SEEM315_15824 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618099|gb|EFY14991.1| hypothetical protein SEEM971_05198 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625770|gb|EFY22589.1| hypothetical protein SEEM973_08997 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626220|gb|EFY23030.1| hypothetical protein SEEM974_05795 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633826|gb|EFY30566.1| hypothetical protein SEEM201_02204 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322638980|gb|EFY35673.1| hypothetical protein SEEM202_10198 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322640518|gb|EFY37170.1| hypothetical protein SEEM954_02430 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644185|gb|EFY40730.1| hypothetical protein SEEM054_02737 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648391|gb|EFY44845.1| hypothetical protein SEEM675_10827 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322655415|gb|EFY51723.1| hypothetical protein SEEM965_14118 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322660829|gb|EFY57060.1| hypothetical protein SEEM19N_10393 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662875|gb|EFY59082.1| hypothetical protein SEEM801_18882 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322668059|gb|EFY64218.1| hypothetical protein SEEM507_21346 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674179|gb|EFY70273.1| hypothetical protein SEEM877_13623 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675466|gb|EFY71540.1| hypothetical protein SEEM867_03512 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322683119|gb|EFY79135.1| hypothetical protein SEEM180_11192 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686813|gb|EFY82791.1| hypothetical protein SEEM600_19185 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323130142|gb|ADX17572.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323195295|gb|EFZ80475.1| hypothetical protein SEEM581_08834 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199188|gb|EFZ84283.1| hypothetical protein SEEM501_00410 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202999|gb|EFZ88032.1| hypothetical protein SEEM460_02801 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323207444|gb|EFZ92392.1| hypothetical protein SEEM020_07033 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323209933|gb|EFZ94845.1| hypothetical protein SEEM6152_06518 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217427|gb|EGA02146.1| hypothetical protein SEEM0077_21182 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323224646|gb|EGA08919.1| hypothetical protein SEEM0055_00781 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323231449|gb|EGA15562.1| hypothetical protein SEEM0052_14546 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323235890|gb|EGA19969.1| hypothetical protein SEEM3312_13514 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240459|gb|EGA24502.1| hypothetical protein SEEM5258_10806 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323245352|gb|EGA29352.1| hypothetical protein SEEM1156_16456 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246718|gb|EGA30690.1| hypothetical protein SEEM9199_07591 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323253573|gb|EGA37401.1| hypothetical protein SEEM8282_15368 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257720|gb|EGA41403.1| hypothetical protein SEEM8283_00622 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260383|gb|EGA43999.1| hypothetical protein SEEM8284_20548 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266825|gb|EGA50311.1| hypothetical protein SEEM8285_18889 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269031|gb|EGA52487.1| hypothetical protein SEEM8287_03672 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|332988754|gb|AEF07737.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 204
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 86/131 (65%), Gaps = 4/131 (3%)
Query: 3 GIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSL 62
G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW+L
Sbjct: 55 GFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTL 114
Query: 63 IFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLTQC 118
I S++II+ ++V++ + + + I ++F+ LI AN IST+LECG +C
Sbjct: 115 ITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGEC 174
Query: 119 FDNPTFYQLLN 129
NP Y+LL+
Sbjct: 175 AANPVTYKLLS 185
>gi|156977740|ref|YP_001448646.1| hypothetical protein VIBHAR_06528 [Vibrio harveyi ATCC BAA-1116]
gi|156529334|gb|ABU74419.1| hypothetical protein VIBHAR_06528 [Vibrio harveyi ATCC BAA-1116]
Length = 179
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MI GFL N++ G + RHY ++++GA+ + RQV +H++PG GY P+FGMH YTW
Sbjct: 48 MIMFGFLLNVVYGPQSRHYGVVLIGALYGVATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + + I ++V+++ + E S + I L + ++ N I T ECG Q
Sbjct: 108 AFVLFVATIFAVAVILMLTSREESPEPYEMSNLGRITCLLAISVVALNVIGTFAECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y L N
Sbjct: 168 CPDNPESYWLFN 179
>gi|153832246|ref|ZP_01984913.1| putative membrane protein [Vibrio harveyi HY01]
gi|148871557|gb|EDL70412.1| putative membrane protein [Vibrio harveyi HY01]
Length = 179
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MI GFL N++ G + RHY ++++GA+ + RQV +H++PG GY P+FGMH YTW
Sbjct: 48 MIMFGFLLNVVYGPQSRHYGVVLIGALYGVATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + + I ++V+++ E S + I L + ++ N I T ECG Q
Sbjct: 108 AFVLFVATIFAVAVILMLTNKEESSEPYEMSNLGRITCLLAISVVALNVIGTFAECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y L N
Sbjct: 168 CPDNPESYWLFN 179
>gi|89076419|ref|ZP_01162744.1| hypothetical protein SKA34_21524 [Photobacterium sp. SKA34]
gi|89047887|gb|EAR53480.1| hypothetical protein SKA34_21524 [Photobacterium sp. SKA34]
Length = 182
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GF+ N++ G +QRHY ++++GA+ A RQV +H++PG G+ P+ GMH YTW
Sbjct: 48 MVMFGFMLNVVYGTQQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFA---NFISTILECGLTQ 117
+ + + I +++L+L E + + ++ + I A N IST +ECG Q
Sbjct: 108 AFVIFAMAIAGVALLLLLWNKEWTSENYQMNKFGKFVCILAIVAVLINVISTFIECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y LL+
Sbjct: 168 CPDNPVSYWLLD 179
>gi|62180435|ref|YP_216852.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|224583639|ref|YP_002637437.1| hypothetical protein SPC_1858 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|62128068|gb|AAX65771.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|224468166|gb|ACN45996.1| hypothetical protein SPC_1858 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322714908|gb|EFZ06479.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 204
Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 86/131 (65%), Gaps = 4/131 (3%)
Query: 3 GIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSL 62
G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW+L
Sbjct: 55 GFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQMCLHIMPGDTGYGSTFFGLHFYTWTL 114
Query: 63 IFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLTQC 118
I S++II+ ++V++ + + + I ++F+ LI AN IST+LECG +C
Sbjct: 115 ITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGEC 174
Query: 119 FDNPTFYQLLN 129
NP Y+LL+
Sbjct: 175 AANPVTYKLLS 185
>gi|90580693|ref|ZP_01236497.1| hypothetical protein VAS14_16187 [Vibrio angustum S14]
gi|90438150|gb|EAS63337.1| hypothetical protein VAS14_16187 [Vibrio angustum S14]
Length = 179
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GF+ N++ G + RHY ++++GA+ + RQV +H++PG GY P+FGMH YTW
Sbjct: 48 MVAFGFMLNVVYGPQSRHYGVVLIGALYGIATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFA---NFISTILECGLTQ 117
+ + + I ++V++L + + + VF I N I+T +ECG Q
Sbjct: 108 AFVLFAITIFGVAVILLLTNKDESHESYNITHFGRIVCVFAIVVVALNVIATFVECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y L N
Sbjct: 168 CPDNPVSYWLFN 179
>gi|293607074|ref|ZP_06689417.1| inner protein [Achromobacter piechaudii ATCC 43553]
gi|292814564|gb|EFF73702.1| inner protein [Achromobacter piechaudii ATCC 43553]
Length = 190
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G+GFL N+ G HY + I ++ + + RQVL+H+ PGD GY P GMH YTW
Sbjct: 53 LAGVGFLLNMRLGPSPMHYGMSIAASLGGMVASGRQVLLHLAPGDPGYGSPFLGMHFYTW 112
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAI---YLFVFLIFANFISTILEC 113
+ I II+F +L TA+ K K PV + I LF + AN ST LEC
Sbjct: 113 AFIAFGAIIVFC---VLMQTADRKWGDSMLKKPVSALGILVMALFFVMTLANLGSTTLEC 169
Query: 114 GLTQCFDNPTFY 125
G C DNP Y
Sbjct: 170 GFGPCPDNPETY 181
>gi|89072064|ref|ZP_01158660.1| hypothetical protein SKA34_08518 [Photobacterium sp. SKA34]
gi|89052165|gb|EAR57616.1| hypothetical protein SKA34_08518 [Photobacterium sp. SKA34]
Length = 179
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GF+ N++ G + RHY ++++GA+ + RQV +H++PG GY P+FGMH YTW
Sbjct: 48 MVAFGFMLNVVYGPQSRHYGVVLIGALYGIATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFA---NFISTILECGLTQ 117
+ + + + ++V++L + + + VF I N I+T +ECG Q
Sbjct: 108 AFVLFAITVFGVAVILLLTNKDESHESYNITHFGRIVCVFAIVVVALNVIATFVECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y L N
Sbjct: 168 CPDNPVSYWLFN 179
>gi|330445116|ref|ZP_08308768.1| putative membrane protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489307|dbj|GAA03265.1| putative membrane protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 182
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GF+ N++ G +QRHY ++++GA+ A RQV +H++PG G+ P+ GMH YTW
Sbjct: 48 MVMFGFMLNVVYGTQQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFA---NFISTILECGLTQ 117
+ + + I +++L++ + + + ++ + I A N +ST LECG Q
Sbjct: 108 AFVIFGMTIAGVALLLMLWNKDWTSENYQMNKFGKFVCILAIVAVLINVVSTFLECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y LL+
Sbjct: 168 CPDNPVSYWLLD 179
>gi|260779144|ref|ZP_05888036.1| putative inner membrane protein [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605308|gb|EEX31603.1| putative inner membrane protein [Vibrio coralliilyticus ATCC
BAA-450]
Length = 179
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 78/134 (58%), Gaps = 7/134 (5%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GFL N+ G +QRHY ++++GA+ A RQV +H++PG GY +FGMH YTW
Sbjct: 48 MVMFGFLLNVKYGPQQRHYGVVLIGALFGAATALRQVSLHVIPGTPGYGSAIFGMHYYTW 107
Query: 61 SLIFSLVIILFISVLML-----FDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGL 115
+ + IL +++L++ ++T +++K + L + ++ N +ST +ECG
Sbjct: 108 AFVLFSATILAVAILLMLWNEAWNTEPFEMSK--IGRWVCLLAISVVALNMLSTFVECGP 165
Query: 116 TQCFDNPTFYQLLN 129
QC DNP Y L N
Sbjct: 166 YQCPDNPVSYWLFN 179
>gi|149187374|ref|ZP_01865672.1| hypothetical protein VSAK1_17662 [Vibrio shilonii AK1]
gi|148838910|gb|EDL55849.1| hypothetical protein VSAK1_17662 [Vibrio shilonii AK1]
Length = 182
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GFL N++ G +QRHY ++++GA+ A RQV +H++PG G+ P+ GMH YTW
Sbjct: 48 MVMFGFLLNIVYGTEQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107
Query: 61 S-LIFSLVI--ILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ +IF++ I + + VL D ++ + S + L + + N +ST +ECG Q
Sbjct: 108 AFVIFAMTIAGVALLLVLWNKDWSDDQYQMSMFGRVVCILAIVAVAINVLSTFIECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y LL+
Sbjct: 168 CPDNPVSYWLLD 179
>gi|260434000|ref|ZP_05787971.1| hypothetical protein SL1157_3162 [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417828|gb|EEX11087.1| hypothetical protein SL1157_3162 [Silicibacter lacuscaerulensis
ITI-1157]
Length = 189
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 81/135 (60%), Gaps = 7/135 (5%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+G NL+ G + +HY++M++ A+ ++ RQ+L+HI+PG Y PV G+H YTW+
Sbjct: 49 VGVGLGLNLLYGPRPQHYAMMLIAALYGGSVSVRQILLHIVPGTGHYGSPVLGLHYYTWA 108
Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSPVR-------EIAIYLFVFLIFANFISTILECG 114
I +I+L +++++FD + ++ R ++A ++ + L N ST+LECG
Sbjct: 109 AICFFLILLGTAIMLMFDRQYVDDRRAQPRFGGNRLAKVAFFIMLGLAVLNAGSTLLECG 168
Query: 115 LTQCFDNPTFYQLLN 129
C D PT Y+L++
Sbjct: 169 PGVCADPPTDYKLID 183
>gi|52840653|ref|YP_094452.1| inner (transmembrane) protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52627764|gb|AAU26505.1| inner (transmembrane) protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 182
Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 84/131 (64%), Gaps = 4/131 (3%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+ F+ NL+ GI+ HY +M+L + I+ RQ+ IH+ PGD GY +FG+HLYTWS
Sbjct: 51 VGLCFVMNLMLGIRASHYGLMLLATLLGLSISVRQMYIHLTPGDPGYGGLIFGLHLYTWS 110
Query: 62 LIFSLVIILFISVLMLFDTA---EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQC 118
I LVIIL I+ ++ D + KV +S ++ I++F LI AN IST LECG +C
Sbjct: 111 AIIFLVIILLIAGALILDKGFMPDYKV-RSKSAKVMIWVFFILILANGISTFLECGPHEC 169
Query: 119 FDNPTFYQLLN 129
DNP+ Y LLN
Sbjct: 170 PDNPSKYYLLN 180
>gi|163801307|ref|ZP_02195206.1| hypothetical protein 1103602000598_AND4_10579 [Vibrio sp. AND4]
gi|159174796|gb|EDP59596.1| hypothetical protein AND4_10579 [Vibrio sp. AND4]
Length = 179
Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MI G L N++ G + RHY ++++GA+ + RQV +H++PG GY P+ GMH YTW
Sbjct: 48 MIMFGLLLNVVYGPQSRHYGVVLIGALYGVATSLRQVSLHVIPGTPGYGSPILGMHYYTW 107
Query: 61 SLIFSLVIILFISV-LMLFDTAEIKVA--KSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + + IL ++V LML + E + + ++ L + ++ N I T ECG Q
Sbjct: 108 AFVLFVTTILVVAVILMLTNKGESSAPYEMTSLGRVSCLLAISVVALNVIGTFAECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y + N
Sbjct: 168 CPDNPESYWMFN 179
>gi|170701333|ref|ZP_02892296.1| putative transmembrane protein [Burkholderia ambifaria IOP40-10]
gi|170133749|gb|EDT02114.1| putative transmembrane protein [Burkholderia ambifaria IOP40-10]
Length = 201
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 74/140 (52%), Gaps = 13/140 (9%)
Query: 3 GIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSL 62
G+G NL G++ HY+I++ GA+ +I+ RQ L+HI+PG Y + GMH+Y +
Sbjct: 59 GMGLALNLRFGMRPSHYAIILFGALLGGVISARQSLLHIVPGSGAYGREILGMHMYVAAF 118
Query: 63 IFSLVIILFISVLMLFD-------TAEIKVAKSPVRE------IAIYLFVFLIFANFIST 109
+ + I++ ++ ++LFD +E + P R +A+ LF L N +ST
Sbjct: 119 VGFVAIVVAVACMLLFDCQFLQRADSEAPAEQQPPRSLGGVSMVAVALFAVLTLGNAVST 178
Query: 110 ILECGLTQCFDNPTFYQLLN 129
LECG C NP Y LL
Sbjct: 179 ALECGAGLCVANPVSYLLLG 198
>gi|49474632|ref|YP_032674.1| hypothetical protein BQ11240 [Bartonella quintana str. Toulouse]
gi|49240136|emb|CAF26585.1| hypothetical protein BQ11240 [Bartonella quintana str. Toulouse]
Length = 196
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 80/131 (61%), Gaps = 4/131 (3%)
Query: 3 GIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSL 62
G GFLFN+ +++ HY ++ILG + CI A RQ+ + I GDLG +FG+HLY W+
Sbjct: 59 GCGFLFNIHLRVRKIHYGMVILGCMVICISAARQIFLQITLGDLGDGPTLFGLHLYIWAF 118
Query: 63 IFSLVIILFISVLMLFD--TAEIKVAKSPVR--EIAIYLFVFLIFANFISTILECGLTQC 118
I + + + ++ +M+ T + KV R +A +LFVFLI AN ++ ILECG C
Sbjct: 119 IIAGLCLFAVAFIMILSEWTRKFKVFSPFPRLGGMASFLFVFLIAANLLTAILECGSGLC 178
Query: 119 FDNPTFYQLLN 129
++P Y++L+
Sbjct: 179 TNDPVKYEVLS 189
>gi|317405865|gb|EFV86148.1| hypothetical protein HMPREF0005_02716 [Achromobacter xylosoxidans
C54]
Length = 190
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G+G L NL G HY++ I ++ + + RQVL+HI PGD GY P G+H YTW
Sbjct: 53 LAGVGLLLNLRLGPSPMHYAMTIAASLGGMVASGRQVLLHIAPGDAGYGTPFLGLHFYTW 112
Query: 61 SLIFSLVIILFISVLMLFDTA-EIKVAKSPVREIAI---YLFVFLIFANFISTILECGLT 116
+ I +I+F +++ D + K PV + + LF ++ AN ST L+CG
Sbjct: 113 AFIAFGALIVFCVLMLSVDRKWGDNMLKRPVSVLGVVIMALFFIMVLANLGSTTLQCGFG 172
Query: 117 QCFDNPTFY 125
C DNP Y
Sbjct: 173 PCPDNPAGY 181
>gi|54296443|ref|YP_122812.1| hypothetical protein lpp0474 [Legionella pneumophila str. Paris]
gi|53750228|emb|CAH11622.1| hypothetical protein lpp0474 [Legionella pneumophila str. Paris]
Length = 182
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 83/131 (63%), Gaps = 4/131 (3%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+ F+ NL+ GI+ HY +M+L ++ I+ RQ+ IH+ PGD GY G+HLYTWS
Sbjct: 51 VGLCFVMNLMLGIRASHYGLMLLASLLGLSISVRQMYIHLTPGDPGYGGLFLGLHLYTWS 110
Query: 62 LIFSLVIILFISVLMLFDTA---EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQC 118
I LVIIL I+ ++ D + KV +S ++ I++F LI AN IST LECG +C
Sbjct: 111 AIIFLVIILLIAGALILDKGLMPDYKV-RSKSAKVMIWVFFILILANGISTFLECGPHEC 169
Query: 119 FDNPTFYQLLN 129
DNP+ Y LLN
Sbjct: 170 PDNPSKYYLLN 180
>gi|148360976|ref|YP_001252183.1| transmembrane protein [Legionella pneumophila str. Corby]
gi|296105958|ref|YP_003617658.1| inner (transmembrane) protein [Legionella pneumophila 2300/99
Alcoy]
gi|148282749|gb|ABQ56837.1| inner (transmembrane) protein [Legionella pneumophila str. Corby]
gi|295647859|gb|ADG23706.1| inner (transmembrane) protein [Legionella pneumophila 2300/99
Alcoy]
Length = 182
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 83/131 (63%), Gaps = 4/131 (3%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+ F+ NL+ GI+ HY +M+L ++ I+ RQ+ IH+ PGD GY G+HLYTWS
Sbjct: 51 VGLCFVMNLMLGIRASHYGLMLLASLLGLSISVRQMYIHLTPGDPGYGGLFLGLHLYTWS 110
Query: 62 LIFSLVIILFISVLMLFDTA---EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQC 118
I LVIIL I+ ++ D + KV +S ++ I++F LI AN IST LECG +C
Sbjct: 111 AIIFLVIILLIAGALILDKGFMPDYKV-RSKSAKVMIWVFFILILANGISTFLECGPHEC 169
Query: 119 FDNPTFYQLLN 129
DNP+ Y LLN
Sbjct: 170 PDNPSKYYLLN 180
>gi|54293401|ref|YP_125816.1| hypothetical protein lpl0450 [Legionella pneumophila str. Lens]
gi|53753233|emb|CAH14680.1| hypothetical protein lpl0450 [Legionella pneumophila str. Lens]
gi|307609216|emb|CBW98680.1| hypothetical protein LPW_04891 [Legionella pneumophila 130b]
Length = 182
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 83/131 (63%), Gaps = 4/131 (3%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+ F+ NL+ GI+ HY +M+L ++ I+ RQ+ IH+ PGD GY G+HLYTWS
Sbjct: 51 VGLCFVMNLMLGIRASHYGLMLLASLLGLSISVRQMYIHLTPGDPGYGGLFLGLHLYTWS 110
Query: 62 LIFSLVIILFISVLMLFDTA---EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQC 118
I LVIIL I+ ++ D + KV +S ++ I++F LI AN IST LECG +C
Sbjct: 111 AIIFLVIILLIAGALILDKGLMPDYKV-RSKSAKVMIWVFFILILANGISTFLECGPHEC 169
Query: 119 FDNPTFYQLLN 129
DNP+ Y LLN
Sbjct: 170 PDNPSKYYLLN 180
>gi|298293265|ref|YP_003695204.1| disulfide bond formation protein DsbB [Starkeya novella DSM 506]
gi|296929776|gb|ADH90585.1| Disulfide bond formation protein DsbB [Starkeya novella DSM 506]
Length = 199
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+G NL G + HY+I IL A+ +I+TRQVL+HI+PG + G+H Y+W+
Sbjct: 58 VGLGLALNLRFGPRPSHYAIAILSAMAGGVISTRQVLLHIVPGSGTFGADFLGLHFYSWA 117
Query: 62 LIFSLVIILFISVLMLFD----TAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
L+ +VI +VL+LFD + + A L L N +ST+LEC
Sbjct: 118 LVLFIVIAAGCAVLLLFDRQFAPGTARYRLGGLALAAFALIALLALGNGVSTVLECAGGL 177
Query: 118 CFDNPTFYQLLN 129
C DNPT YQLL
Sbjct: 178 CPDNPTTYQLLE 189
>gi|332184421|gb|AEE26675.1| Putative inner membrane protein [Francisella cf. novicida 3523]
Length = 189
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 79/136 (58%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 53 IGFGFLLNMRYNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSRVLGMHMYSWV 111
Query: 62 LIFSLVIILFISVLMLFDT--------AEIKVAKSPV----REIAIYLFVFLIFANFIST 109
+ S++ I++I+++M + EI AK+ + +I +F+ ++FAN ST
Sbjct: 112 FVISMIAIIYIAIVMSYPRQYELRKRPQEISEAKNNIIRILTQIVFIIFLIVVFANVAST 171
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187
>gi|158422613|ref|YP_001523905.1| putative transmembrane protein [Azorhizobium caulinodans ORS 571]
gi|158329502|dbj|BAF86987.1| putative transmembrane protein [Azorhizobium caulinodans ORS 571]
Length = 185
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIF 64
G N+ G + HY+I+IL A +I+ RQ L+HI+PG Y + G+H Y+W+L+
Sbjct: 52 GLALNVKFGPRPSHYAIVILSAFCGGLISGRQTLLHIVPGTGTYGDALLGLHFYSWALVL 111
Query: 65 SLVIILFISVLMLFDTAEIKVAKSPVREIA-------IYLFVFLIFANFISTILECGLTQ 117
VIIL +++LFD + P+ A + L L F N ST+LECG
Sbjct: 112 FCVIILGCGLMLLFDQ-QFAGDNRPLGPRAATFGLAMVVLGFLLAFGNGASTVLECGGGL 170
Query: 118 CFDNPTFYQL 127
C DNPT YQL
Sbjct: 171 CPDNPTSYQL 180
>gi|213420991|ref|ZP_03354057.1| hypothetical protein Salmonentericaenterica_25887 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 136
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 75/116 (64%), Gaps = 4/116 (3%)
Query: 18 HYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLML 77
HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW+LI S++II+ ++V++
Sbjct: 2 HYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLA 61
Query: 78 FDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
+ + I ++F+ LI AN IST+LECG +C NP Y+LL+
Sbjct: 62 ISSMNAAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLS 117
>gi|300693183|ref|YP_003749156.1| hypothetical protein RPSI07_mp0150 [Ralstonia solanacearum PSI07]
gi|299075220|emb|CBJ34509.1| conserved membrane protein of unknown function [Ralstonia
solanacearum PSI07]
Length = 183
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 6/133 (4%)
Query: 3 GIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSL 62
G+G NL G + HY++MIL ++ +IA RQ+L+HI+PG Y ++G+HLYT +
Sbjct: 50 GVGLALNLRFGSRPAHYALMILASLAGAVIAGRQILLHIVPGTGTYGEALWGLHLYTLAF 109
Query: 63 I-FSLVI-----ILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
I FS++I +LF+ D V S A+ L L N + T LECG
Sbjct: 110 IAFSVMIAGTAVMLFLERSSEADEGPALVPPSRAALTAVVLLAVLTLGNVVGTFLECGGG 169
Query: 117 QCFDNPTFYQLLN 129
C D+P Y+LL
Sbjct: 170 MCADDPVIYELLG 182
>gi|145589498|ref|YP_001156095.1| hypothetical protein Pnuc_1317 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047904|gb|ABP34531.1| conserved hypothetical protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 187
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+IG + N+ G HY ILG + ++ RQV +HILPGD G+ +H YTW
Sbjct: 52 IIGFALVLNIRCGAHSAHYGWAILGGLVGMTVSLRQVFLHILPGDKGFGATFLELHFYTW 111
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFD 120
+ + + ++ ++L++ E++ +++ + +F+ L+F N +ST+LECG C D
Sbjct: 112 AFVGYMGLLAGQAILLMLPNREVR-SRTWFANALVIIFILLVFGNLLSTLLECGFGPCAD 170
Query: 121 NPTFYQ 126
+P Y
Sbjct: 171 DPVKYD 176
>gi|160872578|ref|ZP_02062710.1| disulfide bond formation protein DsbB family [Rickettsiella grylli]
gi|159121377|gb|EDP46715.1| disulfide bond formation protein DsbB family [Rickettsiella grylli]
Length = 234
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 77/133 (57%), Gaps = 8/133 (6%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
I GFL N+ I+ HY++ +L A+ T I+TRQ+ +H+ PGD GY +P+FG+HLYTW
Sbjct: 93 IAFGFLLNVQFKIRPVHYALSLLSAMLTAAISTRQIFLHVAPGDQGYGLPLFGLHLYTWV 152
Query: 62 LIFSLVIILFISVLMLF-------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILECG 114
I + II++IS++ + + K K +FV IF N I+T LECG
Sbjct: 153 FILCVAIIIYISIIFSIFPQYQYEEPPKTKTMKLLKHATFAAVFVLAIF-NGIATYLECG 211
Query: 115 LTQCFDNPTFYQL 127
+ C +NP Y++
Sbjct: 212 IKVCPENPVHYEI 224
>gi|90409260|ref|ZP_01217363.1| hypothetical protein PCNPT3_04227 [Psychromonas sp. CNPT3]
gi|90309633|gb|EAS37815.1| hypothetical protein PCNPT3_04227 [Psychromonas sp. CNPT3]
Length = 182
Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 74/132 (56%), Gaps = 8/132 (6%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIF 64
G L N++ G + HY IMI GA+ +A RQ+ +H++PG Y P F H YTW+ I
Sbjct: 52 GLLCNVVYGPRTSHYGIMIFGALFGAGVALRQISLHVIPGTPFYGDPFFSFHFYTWAFI- 110
Query: 65 SLVIILFISVLMLFDTAEIKVAKS------PV-REIAIYLFVFLIFANFISTILECGLTQ 117
S V+I+F S +ML +++ K K PV ++AI L +F+ N +ST ECG +
Sbjct: 111 SFVVIVFGSAVMLSFSSQYKEIKYQTFVQMPVLSKVAIALVLFVTLLNVLSTFAECGPFE 170
Query: 118 CFDNPTFYQLLN 129
C +P Y L N
Sbjct: 171 CPSDPIQYWLFN 182
>gi|156977737|ref|YP_001448643.1| hypothetical protein VIBHAR_06525 [Vibrio harveyi ATCC BAA-1116]
gi|156529331|gb|ABU74416.1| hypothetical protein VIBHAR_06525 [Vibrio harveyi ATCC BAA-1116]
Length = 135
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MI GFL N++ GI+Q+HY ++++GA+ + RQ+ +H++PG G+ + GMH YTW
Sbjct: 1 MIMFGFLLNVVYGIEQKHYGVILIGALFGIATSLRQISLHVIPGTPGFGSAILGMHYYTW 60
Query: 61 S-LIFSLVIILFISVLMLFDT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ +IF + + +L+L+D + SP+ + L + + N IST +ECG +
Sbjct: 61 AFVIFCMAVAGIALLLILWDDRYSNQNHEMSPLAKSVCILAIATVLINVISTFIECGPFE 120
Query: 118 CFDNPTFYQLLN 129
C +P Y LL+
Sbjct: 121 CPADPVSYWLLD 132
>gi|194323862|ref|ZP_03057638.1| hypothetical protein FTE_0697 [Francisella tularensis subsp.
novicida FTE]
gi|208779953|ref|ZP_03247297.1| hypothetical protein FTG_0700 [Francisella novicida FTG]
gi|194322226|gb|EDX19708.1| hypothetical protein FTE_0697 [Francisella tularensis subsp.
novicida FTE]
gi|208744408|gb|EDZ90708.1| hypothetical protein FTG_0700 [Francisella novicida FTG]
Length = 194
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 58 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 116
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREIA-----------IYLFVFLIFANFIST 109
+ S+V I++I+++M + E++ + E +F+ ++FAN +ST
Sbjct: 117 FVISMVAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 176
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 177 FFECGLHECPDDPTRY 192
>gi|254374698|ref|ZP_04990179.1| hypothetical protein FTDG_00873 [Francisella novicida GA99-3548]
gi|151572417|gb|EDN38071.1| hypothetical protein FTDG_00873 [Francisella novicida GA99-3548]
Length = 194
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 78/136 (57%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 58 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 116
Query: 62 LIFSLVIILFISVLMLF--------DTAEIKVAKSPVREIAIYLFVF----LIFANFIST 109
+ S+V I++I+++M + +I AK+ + + I + ++FAN +ST
Sbjct: 117 FVISMVAIIYIAIVMSYPRQYELRRQPQQISEAKNNIMRLFIQIIFIIFLLVVFANVVST 176
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 177 FFECGLHECPDDPTRY 192
>gi|332678603|gb|AEE87732.1| Putative inner membrane protein [Francisella cf. novicida Fx1]
Length = 189
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREIA-----------IYLFVFLIFANFIST 109
+ S+V I++I+++M + E++ + E +F+ ++FAN +ST
Sbjct: 112 FVISMVAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187
>gi|118497888|ref|YP_898938.1| DsbB family disulfide bond formation protein [Francisella
tularensis subsp. novicida U112]
gi|118423794|gb|ABK90184.1| disulfide bond formation protein DsbB family [Francisella novicida
U112]
Length = 189
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREIA-----------IYLFVFLIFANFIST 109
+ S+V I++I+++M + E++ + E +F+ ++FAN +ST
Sbjct: 112 FVISMVAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187
>gi|83747350|ref|ZP_00944390.1| Disulfide bond formation protein B [Ralstonia solanacearum UW551]
gi|83725937|gb|EAP73075.1| Disulfide bond formation protein B [Ralstonia solanacearum UW551]
Length = 188
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 11/139 (7%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+G NL G + HY++MIL ++ +IA RQVL+HI+PG Y ++G+HLYT +
Sbjct: 49 VGVGLALNLRFGARPAHYALMILASLGGAVIAGRQVLLHIVPGTGTYGEALWGLHLYTLA 108
Query: 62 LI-FSLVI-----ILFISVLMLFDTAEIKVAKSP-----VREIAIYLFVFLIFANFISTI 110
I FS++I +LF+ L D ++ + P A+ L L N + T
Sbjct: 109 FIAFSVIIAGTAVMLFLERLPEADEGTARLPREPSLTSRAALAAVALLTVLTLGNVVGTF 168
Query: 111 LECGLTQCFDNPTFYQLLN 129
LECG C D+P Y+LL
Sbjct: 169 LECGAGMCADDPVVYELLG 187
>gi|134301613|ref|YP_001121581.1| hypothetical protein FTW_0552 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134049390|gb|ABO46461.1| hypothetical protein FTW_0552 [Francisella tularensis subsp.
tularensis WY96-3418]
Length = 194
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 58 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 116
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREIA-----------IYLFVFLIFANFIST 109
+ S++ I++I+++M + E++ + E +F+ ++FAN +ST
Sbjct: 117 FVISMIAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 176
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 177 FFECGLHECPDDPTRY 192
>gi|62263489|gb|AAX78165.1| unknown protein [synthetic construct]
Length = 224
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 79 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 137
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREIA-----------IYLFVFLIFANFIST 109
+ S++ I++I+++M + E++ + E +F+ ++FAN +ST
Sbjct: 138 FVISMIAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 197
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 198 FFECGLHECPDDPTRY 213
>gi|207739629|ref|YP_002258022.1| hypothetical protein RSIPO_04330 [Ralstonia solanacearum IPO1609]
gi|206593009|emb|CAQ59915.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 172
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 11/139 (7%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+G NL G + HY++MIL ++ +IA RQVL+HI+PG Y ++G+HLYT +
Sbjct: 33 VGVGLALNLRFGARPAHYALMILASLGGAVIAGRQVLLHIVPGTGTYGEALWGLHLYTLA 92
Query: 62 LI-FSLVI-----ILFISVLMLFDTAEIKVAKSP-----VREIAIYLFVFLIFANFISTI 110
I FS++I +LF+ L D ++ + P A+ L L N + T
Sbjct: 93 FIAFSVIIAGTAVMLFLERLPEADEGTARLPREPSLTSRAALAAVALLTVLTLGNVVGTF 152
Query: 111 LECGLTQCFDNPTFYQLLN 129
LECG C D+P Y+LL
Sbjct: 153 LECGAGMCADDPVVYELLG 171
>gi|163801305|ref|ZP_02195204.1| hypothetical protein 1103602000598_AND4_10569 [Vibrio sp. AND4]
gi|159174794|gb|EDP59594.1| hypothetical protein AND4_10569 [Vibrio sp. AND4]
Length = 135
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GFL N++ G++Q+HY I+++GA+ + RQ+ +H++PG G+ P+ GMH YTW
Sbjct: 1 MVMFGFLLNVVFGVEQKHYGIVLVGALFGVATSLRQISLHVIPGTPGFGSPILGMHYYTW 60
Query: 61 S-LIFSLVIILFISVLMLFDT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ +IF + I +L+L++T + S + L + + N IST +ECG +
Sbjct: 61 AFVIFCMAIAGVALLLILWNTEYSNKNYEMSTFGKSVCLLAIVAVLINVISTFVECGPFE 120
Query: 118 CFDNPTFYQLLN 129
C +P Y LL
Sbjct: 121 CPADPVSYWLLE 132
>gi|254373241|ref|ZP_04988730.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570968|gb|EDN36622.1| conserved hypothetical protein [Francisella novicida GA99-3549]
Length = 194
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 58 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 116
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREIA-----------IYLFVFLIFANFIST 109
+ S++ I++I+++M + E++ + E +F+ ++FAN +ST
Sbjct: 117 FVISMIAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 176
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 177 FFECGLHECPDDPTRY 192
>gi|56708347|ref|YP_170243.1| hypothetical protein FTT_1288 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670818|ref|YP_667375.1| hypothetical protein FTF1288 [Francisella tularensis subsp.
tularensis FSC198]
gi|224457473|ref|ZP_03665946.1| hypothetical protein FtultM_07362 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254370969|ref|ZP_04986973.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254875170|ref|ZP_05247880.1| disulfide bond formation protein DsbB family [Francisella
tularensis subsp. tularensis MA00-2987]
gi|54114265|gb|AAV29766.1| NT02FT0215 [synthetic construct]
gi|56604839|emb|CAG45921.1| conserved hypothetical membrane protein [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110321151|emb|CAL09304.1| conserved hypothetical membrane protein [Francisella tularensis
subsp. tularensis FSC198]
gi|151569211|gb|EDN34865.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254841169|gb|EET19605.1| disulfide bond formation protein DsbB family [Francisella
tularensis subsp. tularensis MA00-2987]
gi|282159586|gb|ADA78977.1| hypothetical protein NE061598_07440 [Francisella tularensis subsp.
tularensis NE061598]
Length = 189
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREIA-----------IYLFVFLIFANFIST 109
+ S++ I++I+++M + E++ + E +F+ ++FAN +ST
Sbjct: 112 FVISMIAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187
>gi|187931777|ref|YP_001891762.1| disulfide bond formation protein DsbB family [Francisella
tularensis subsp. mediasiatica FSC147]
gi|187712686|gb|ACD30983.1| disulfide bond formation protein DsbB family [Francisella
tularensis subsp. mediasiatica FSC147]
Length = 189
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREIA-----------IYLFVFLIFANFIST 109
+ S++ I++I+++M + E++ + E +F+ ++FAN +ST
Sbjct: 112 FVISMIAIIYIAIVMSYPRQYELRRQPQQISETKNNIIRLFIQIIFIIFLLVVFANVVST 171
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187
>gi|241668173|ref|ZP_04755751.1| hypothetical protein FphipA2_05361 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876708|ref|ZP_05249418.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842729|gb|EET21143.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 190
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 81/136 (59%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T I+ RQ+ +H+ +G+ VFG+H+YTW
Sbjct: 53 IGFGFLLNMHYHIRPSHYALSLLAAVLTSFISLRQIALHV-SDPVGFGSTVFGLHMYTWV 111
Query: 62 LIFSLVIILFISVLMLF--------DTAEIKVAKS-PVREIA---IYLFVFLIFANFIST 109
+ ++ I++IS++M + D EI AK+ +R+++ +F+ IF N ST
Sbjct: 112 FVICMIAIIYISIVMSYPNQYKINKDANEIADAKNNKIRKLSHIVFVIFIIAIFTNIAST 171
Query: 110 ILECGLTQCFDNPTFY 125
+ECG+ +C DNPT Y
Sbjct: 172 FIECGIHECPDNPTKY 187
>gi|300696744|ref|YP_003747405.1| hypothetical protein RCFBP_mp10194 [Ralstonia solanacearum
CFBP2957]
gi|299073468|emb|CBJ52984.1| conserved membrane protein of unknown function [Ralstonia
solanacearum CFBP2957]
Length = 188
Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+G NL G + HY++MIL ++ +IA RQVL+HI+PG Y ++G+HLYT +
Sbjct: 49 VGVGLALNLCFGARPAHYALMILASLGGAVIAGRQVLLHIVPGTGTYGEALWGLHLYTLA 108
Query: 62 LI-FSLVI-----ILFISVLMLFDTAEIKVAKSP-----VREIAIYLFVFLIFANFISTI 110
I FS++I +LF+ L D V + P A+ L L N + T
Sbjct: 109 FIAFSVIIAGTAVMLFLERLPDADEGTAGVPREPSLTSRAALAAVALLTVLTLGNVVGTF 168
Query: 111 LECGLTQCFDNPTFYQLLN 129
LECG C D+P Y LL
Sbjct: 169 LECGTGMCADDPVIYDLLG 187
>gi|17548420|ref|NP_521760.1| hypothetical protein RS04712 [Ralstonia solanacearum GMI1000]
gi|17430667|emb|CAD17350.1| probable transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 184
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 7/134 (5%)
Query: 3 GIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSL 62
G+G NL G + HY++MIL ++ IA RQ+L+HI+PG Y ++G+HLYT +
Sbjct: 50 GVGLALNLRFGARPAHYALMILASLAGAAIAGRQILLHIVPGTGTYGEALWGLHLYTLAF 109
Query: 63 IFSLVIILFISVLMLFDTA----EIKVAKSPVRE---IAIYLFVFLIFANFISTILECGL 115
I V+I ++L+L + + E ++P+ A+ L L N + T LECG
Sbjct: 110 IAFAVMIAGTAILLLLERSPEADEGPAKRAPMSRAALAAVALLTVLTLGNVLGTFLECGG 169
Query: 116 TQCFDNPTFYQLLN 129
C D+P Y LL
Sbjct: 170 GMCADDPVIYDLLG 183
>gi|299068597|emb|CBJ39827.1| conserved membrane protein of unknown function [Ralstonia
solanacearum CMR15]
Length = 168
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 3 GIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSL 62
G+G NL G + HY++MIL ++ IA RQ+L+HI+PG Y ++G+HLYT +
Sbjct: 34 GVGLALNLRFGARPAHYALMILASLAGAAIAGRQILLHIVPGTGTYGEALWGLHLYTLAF 93
Query: 63 IFSLVIILFISVLMLF----DTAEIKVAKSPVRE---IAIYLFVFLIFANFISTILECGL 115
I + +I +VL+L D E +P+ A+ L L N + T LECG
Sbjct: 94 IAFMAMIAGTAVLLLLERLPDADEGLAKPAPMSRAALAAVALLTVLTLGNVLGTFLECGG 153
Query: 116 TQCFDNPTFYQLLN 129
C D+P Y LL
Sbjct: 154 GMCADDPVIYDLLG 167
>gi|167627604|ref|YP_001678104.1| hypothetical protein Fphi_1378 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597605|gb|ABZ87603.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 146
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG FL N+ ++ HY++ +L A+ T I+ RQ+ +H+ +G+ VFG+H+YTW
Sbjct: 9 IGFEFLLNIRYSVRPSHYALSLLAAVLTSFISLRQIALHV-SDPVGFGSTVFGLHMYTWV 67
Query: 62 LIFSLVIILFISVLMLF--------DTAEIKVAKS-PVREIA---IYLFVFLIFANFIST 109
+ ++ I++IS++M + D EI AK+ +R ++ +F+ IF N ST
Sbjct: 68 FVICMIAIIYISIVMSYPNQYKINKDANEIADAKNNKIRTLSHIVFVIFIIAIFTNIAST 127
Query: 110 ILECGLTQCFDNPTFY 125
+ECG+ +C DNPT Y
Sbjct: 128 FIECGIHECPDNPTKY 143
>gi|207722325|ref|YP_002252761.1| hypothetical protein RSMK04922 [Ralstonia solanacearum MolK2]
gi|206587502|emb|CAQ18084.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 174
Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 13/141 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLG-YSIPVFGMHLYT 59
+G+G NL G + HY++MIL ++ +IA RQVL+HI+PG G Y ++G+HLYT
Sbjct: 33 VGVGLALNLRFGARPAHYALMILASLGGAVIAGRQVLLHIVPGTGTGTYGEALWGLHLYT 92
Query: 60 WSLI-FSLVI-----ILFISVLMLFDTAEIKVAKSP-----VREIAIYLFVFLIFANFIS 108
+ I FS++I +LF+ L D ++ + P A+ L L N +
Sbjct: 93 LAFIAFSVIIAGTAVMLFLERLPEADEGTARLPREPSLTSRAALAAVALLTVLTLGNVVG 152
Query: 109 TILECGLTQCFDNPTFYQLLN 129
T LECG C D+P Y+LL
Sbjct: 153 TFLECGAGMCADDPGAYELLG 173
>gi|161613607|ref|YP_001587572.1| hypothetical protein SPAB_01330 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161362971|gb|ABX66739.1| hypothetical protein SPAB_01330 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|323220563|gb|EGA05014.1| hypothetical protein SEEM0047_12171 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
Length = 132
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 74/113 (65%), Gaps = 4/113 (3%)
Query: 21 IMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDT 80
++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW+LI S++II+ ++V++ +
Sbjct: 1 MVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVILAISS 60
Query: 81 AEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
+ + I ++F+ LI AN IST+LECG +C NP Y+LL+
Sbjct: 61 MNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLS 113
>gi|148978274|ref|ZP_01814792.1| hypothetical protein VSWAT3_15147 [Vibrionales bacterium SWAT-3]
gi|145962575|gb|EDK27852.1| hypothetical protein VSWAT3_15147 [Vibrionales bacterium SWAT-3]
Length = 129
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Query: 7 LFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSL 66
+ N++ G +QRHY I+++GA+ + RQ+ +H++PG GY +FGMH YTW+ I
Sbjct: 1 MLNVVYGAEQRHYGIVLIGALFGAATSLRQISLHVIPGTPGYGSAIFGMHYYTWAFIIFG 60
Query: 67 VIILFISVLMLFDTAEIKVAKSPV----REIAIYLFVFLIFANFISTILECGLTQCFDNP 122
+ I +++L++ + K + + + + I + + + N IST LECG +C +P
Sbjct: 61 MTIFGVALLLMLWNNDCKTKEYQMTTFGKSVCI-IAIITVLINVISTFLECGPYECPADP 119
Query: 123 TFY 125
Y
Sbjct: 120 ISY 122
>gi|167627537|ref|YP_001678037.1| DsbB family disulfide bond formation protein [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|167597538|gb|ABZ87536.1| disulfide bond formation protein, DsbB family [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 178
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 13 GIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFI 72
G K ++Y + L AI +A Q+L+HI+PG Y VF +H+YTW+ I S++ I++
Sbjct: 60 GNKYKNYLFVTLVAILNAAMAMTQILLHIVPGTGNYGDAVFSLHMYTWNFIVSIIFIIYA 119
Query: 73 SVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++ F E K S ++AI+L + L AN IS +ECG C +P Y LLN
Sbjct: 120 TICGFFTLNEDKKKNLSLFAKVAIFLILALTLANTISVFIECGPHLCPSDPDSYWLLN 177
>gi|294141630|ref|YP_003557608.1| disulfide bond formation protein B [Shewanella violacea DSS12]
gi|293328099|dbj|BAJ02830.1| disulfide bond formation protein B, putative [Shewanella violacea
DSS12]
Length = 182
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIF 64
G L N++ G + HY IM+ GA+ +A RQV +H++PG Y P H YTW+ I
Sbjct: 52 GLLCNVVYGPRTSHYGIMLFGALFGAAVALRQVSLHVIPGTPFYGDPFLSFHFYTWAFIT 111
Query: 65 SLVIILFISVLMLFDTAEIKVAKSPVRE------IAIYLFVFLIFANFISTILECGLTQC 118
VIIL +V++ F + +V + E +A+ + + + N +ST ECG +C
Sbjct: 112 FAVIILGTAVMLSFSSQYKEVKHQTLGEMPLLSKLAVGIVLLVTLMNVLSTFAECGPFEC 171
Query: 119 FDNPTFYQLLN 129
+P Y L +
Sbjct: 172 PADPVQYWLFS 182
>gi|241668105|ref|ZP_04755683.1| DsbB family disulfide bond formation protein [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254876640|ref|ZP_05249350.1| disulfide bond formation protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842661|gb|EET21075.1| disulfide bond formation protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 178
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 13 GIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFI 72
G K ++Y + L AI +A Q+L+HI+PG Y VF +H+YTW+ I S++ I++
Sbjct: 60 GNKYKNYLFVTLVAILNAAMAMTQILLHIVPGTGNYGDAVFSLHMYTWNFIVSIIFIIYA 119
Query: 73 SVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++ F E K + +IAI+L + L AN I+ +ECG C +P Y LLN
Sbjct: 120 TICGFFTPNEDKKKNLNLFTKIAIFLILALTLANTINVFVECGPHLCPSDPDSYWLLN 177
>gi|254480095|ref|ZP_05093343.1| hypothetical protein GPB2148_3132 [marine gamma proteobacterium
HTCC2148]
gi|214039657|gb|EEB80316.1| hypothetical protein GPB2148_3132 [marine gamma proteobacterium
HTCC2148]
Length = 181
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+ IG L N+ G + HY I ++ +A RQV +H++PG GY P G+H YTW+
Sbjct: 47 VSIGLLLNVTHGPRPSHYGFAIAASVAGGAMALRQVSLHVIPGTPGYGSPFLGLHFYTWA 106
Query: 62 LI---FSLVIILFISVL--MLFDTAEIKVAKSPVR-EIAIYLFVFLIFANFISTILECGL 115
+ F + I IS L D ++ + P+ ++AI + +I N ++ ECG
Sbjct: 107 FLLFAFMIAAIAMISSLPRQYDDLGWLQWRQQPLLCKLAIVVITIIISLNALAAFSECGP 166
Query: 116 TQCFDNPTFYQLLN 129
C DNP Y L
Sbjct: 167 GTCPDNPEQYWLFQ 180
>gi|51246282|ref|YP_066166.1| hypothetical protein DP2430 [Desulfotalea psychrophila LSv54]
gi|50877319|emb|CAG37159.1| hypothetical membrane protein [Desulfotalea psychrophila LSv54]
Length = 195
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 4 IGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLI 63
IG + NL G++ HY I+++ A+ + RQ+L+HI+PG Y P++G H+YTW+ I
Sbjct: 66 IGAVLNLNFGMRTSHYGIILISALFGMAGSVRQILLHIVPGTGNYGAPIWGYHMYTWAGI 125
Query: 64 FSLVIILFISVLMLFD-TAEIKVAKSPVREIAIYLFVFLIFANF---ISTILECGLTQCF 119
++F ++++L + T + + + Y+ +F I + + T ECGL QC
Sbjct: 126 AFFCSLVFSAIMLLQERTITLGMIVQQRDKATRYITIFAITLSLTLVVLTFAECGLGQCP 185
Query: 120 DNPTFYQL 127
DNPT Y L
Sbjct: 186 DNPTRYWL 193
>gi|156502603|ref|YP_001428668.1| hypothetical protein FTA_1237 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|156253206|gb|ABU61712.1| hypothetical membrane protein [Francisella tularensis subsp.
holarctica FTNF002-00]
Length = 194
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T I+ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 58 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFISLRQIALHVT-DPVGFGSKVLGMHMYSWV 116
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREIA-----------IYLFVFLIFANFIST 109
+ S++ I++I++++ + E++ + E +F+ ++FAN +ST
Sbjct: 117 FVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 176
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 177 FFECGLHECPDDPTRY 192
>gi|290953960|ref|ZP_06558581.1| hypothetical protein FtulhU_06713 [Francisella tularensis subsp.
holarctica URFT1]
gi|295312637|ref|ZP_06803387.1| hypothetical protein FtulhU_06705 [Francisella tularensis subsp.
holarctica URFT1]
Length = 189
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T I+ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFISLRQIALHVT-DPVGFGSKVLGMHMYSWV 111
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREIA-----------IYLFVFLIFANFIST 109
+ S++ I++I++++ + E++ + E +F+ ++FAN +ST
Sbjct: 112 FVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187
>gi|254369614|ref|ZP_04985625.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|157122568|gb|EDO66703.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
Length = 189
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREIA-----------IYLFVFLIFANFIST 109
+ S++ I++I++++ + E++ + E +F+ ++FAN +ST
Sbjct: 112 FVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187
>gi|89256495|ref|YP_513857.1| hypothetical protein FTL_1173 [Francisella tularensis subsp.
holarctica LVS]
gi|115314925|ref|YP_763648.1| hypothetical protein FTH_1146 [Francisella tularensis subsp.
holarctica OSU18]
gi|167011114|ref|ZP_02276045.1| hypothetical protein Ftulh_10473 [Francisella tularensis subsp.
holarctica FSC200]
gi|254367827|ref|ZP_04983847.1| hypothetical protein FTHG_01111 [Francisella tularensis subsp.
holarctica 257]
gi|89144326|emb|CAJ79612.1| conserved hypothetical membrane protein [Francisella tularensis
subsp. holarctica LVS]
gi|115129824|gb|ABI83011.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica OSU18]
gi|134253637|gb|EBA52731.1| hypothetical protein FTHG_01111 [Francisella tularensis subsp.
holarctica 257]
Length = 189
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREIA-----------IYLFVFLIFANFIST 109
+ S++ I++I++++ + E++ + E +F+ ++FAN +ST
Sbjct: 112 FVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187
>gi|332678668|gb|AEE87797.1| Putative inner membrane protein [Francisella cf. novicida Fx1]
Length = 178
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Query: 13 GIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFI 72
G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+
Sbjct: 60 GNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILYA 119
Query: 73 SVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++ L E K K S + ++AI L + L AN ++ +ECG C +P Y L N
Sbjct: 120 AICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCLSDPNSYWLFN 177
>gi|87306912|ref|ZP_01089058.1| conserved membrane protein [Blastopirellula marina DSM 3645]
gi|87290285|gb|EAQ82173.1| conserved membrane protein [Blastopirellula marina DSM 3645]
Length = 196
Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
Y + IL A+ I+TRQ+L+HI+P D GY PVFG+HLYTW+L+ +V+++ + ++F
Sbjct: 74 YGMSILAAVCGAAISTRQILLHIVPPDPGYGDPVFGLHLYTWALVVFVVVLIDSGLNLMF 133
Query: 79 DTAEIKVAKSPVR-----EIAIYLFVFLIFANFISTILECGLTQCF-DNPTFYQL 127
A V PV+ + I LF +I AN + + G D+P Y+L
Sbjct: 134 --AGSLVTDQPVKFGSVSKGVIGLFGAVIVANLLCVFCQAGFHWILPDDPARYEL 186
>gi|254368867|ref|ZP_04984880.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|157121788|gb|EDO65958.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
Length = 181
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Query: 13 GIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFI 72
G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+
Sbjct: 63 GNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILYA 122
Query: 73 SVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++ L E K K S + ++AI L + L AN ++ +ECG C +P Y L N
Sbjct: 123 AICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 180
>gi|56708458|ref|YP_170354.1| hypothetical protein FTT_1410 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670929|ref|YP_667486.1| hypothetical protein FTF1410 [Francisella tularensis subsp.
tularensis FSC198]
gi|254371082|ref|ZP_04987084.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254875302|ref|ZP_05248012.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|56604950|emb|CAG46043.1| conserved hypothetical membrane protein [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110321262|emb|CAL09426.1| conserved hypothetical membrane protein [Francisella tularensis
subsp. tularensis FSC198]
gi|151569322|gb|EDN34976.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254841301|gb|EET19737.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
Length = 181
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Query: 13 GIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFI 72
G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+
Sbjct: 63 GNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILYA 122
Query: 73 SVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++ L E K K S + ++AI L + L AN ++ +ECG C +P Y L N
Sbjct: 123 AICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 180
>gi|118497951|ref|YP_899001.1| DsbB family disulfide bond formation protein [Francisella
tularensis subsp. novicida U112]
gi|134301548|ref|YP_001121516.1| hypothetical protein FTW_0477 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|187931395|ref|YP_001891379.1| disulfide bond formation protein, DsbB family [Francisella
tularensis subsp. mediasiatica FSC147]
gi|194323173|ref|ZP_03056957.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida FTE]
gi|208779641|ref|ZP_03246986.1| conserved hypothetical protein [Francisella novicida FTG]
gi|224457609|ref|ZP_03666082.1| hypothetical protein FtultM_08199 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254373304|ref|ZP_04988792.1| disulfide bond formation protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|254374767|ref|ZP_04990248.1| disulfide bond formation protein [Francisella novicida GA99-3548]
gi|46254985|gb|AAP97855.2| 20 kDa putative exported protein [Francisella tularensis]
gi|118423857|gb|ABK90247.1| disulfide bond formation protein, DsbB family [Francisella novicida
U112]
gi|134049325|gb|ABO46396.1| putative disulfide bond formation protein [Francisella tularensis
subsp. tularensis WY96-3418]
gi|151571030|gb|EDN36684.1| disulfide bond formation protein [Francisella novicida GA99-3549]
gi|151572486|gb|EDN38140.1| disulfide bond formation protein [Francisella novicida GA99-3548]
gi|187712304|gb|ACD30601.1| disulfide bond formation protein, DsbB family [Francisella
tularensis subsp. mediasiatica FSC147]
gi|194322537|gb|EDX20017.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida FTE]
gi|208744602|gb|EDZ90901.1| conserved hypothetical protein [Francisella novicida FTG]
gi|282159653|gb|ADA79044.1| hypothetical protein NE061598_07835 [Francisella tularensis subsp.
tularensis NE061598]
Length = 178
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Query: 13 GIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFI 72
G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+
Sbjct: 60 GNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILYA 119
Query: 73 SVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++ L E K K S + ++AI L + L AN ++ +ECG C +P Y L N
Sbjct: 120 AICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 177
>gi|89256043|ref|YP_513405.1| hypothetical protein FTL_0652 [Francisella tularensis subsp.
holarctica LVS]
gi|156502055|ref|YP_001428120.1| hypothetical protein FTA_0688 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167010201|ref|ZP_02275132.1| hypothetical protein Ftulh_05650 [Francisella tularensis subsp.
holarctica FSC200]
gi|254367383|ref|ZP_04983409.1| hypothetical protein FTHG_00611 [Francisella tularensis subsp.
holarctica 257]
gi|290954244|ref|ZP_06558865.1| hypothetical protein FtulhU_08389 [Francisella tularensis subsp.
holarctica URFT1]
gi|295312364|ref|ZP_06803149.1| hypothetical protein FtulhU_08376 [Francisella tularensis subsp.
holarctica URFT1]
gi|89143874|emb|CAJ79092.1| conserved hypothetical membrane protein [Francisella tularensis
subsp. holarctica LVS]
gi|134253199|gb|EBA52293.1| hypothetical protein FTHG_00611 [Francisella tularensis subsp.
holarctica 257]
gi|156252658|gb|ABU61164.1| putative disulfide bond formation protein [Francisella tularensis
subsp. holarctica FTNF002-00]
Length = 178
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Query: 13 GIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFI 72
G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+
Sbjct: 60 GNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILYA 119
Query: 73 SVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++ L E K K S + ++AI L + L AN ++ +ECG C +P Y L N
Sbjct: 120 AICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 177
>gi|62257904|gb|AAX77752.1| unknown protein [synthetic construct]
Length = 216
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Query: 13 GIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFI 72
G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+
Sbjct: 89 GNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILYA 148
Query: 73 SVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++ L E K K S + ++AI L + L AN ++ +ECG C +P Y L N
Sbjct: 149 AICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 206
>gi|115314520|ref|YP_763243.1| hypothetical protein FTH_0654 [Francisella tularensis subsp.
holarctica OSU18]
gi|115129419|gb|ABI82606.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica OSU18]
Length = 176
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 13 GIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFI 72
G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+
Sbjct: 63 GNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILYA 122
Query: 73 SVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFY 125
++ L E K K S + ++AI L + L AN ++ +ECG C +P Y
Sbjct: 123 AICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSY 176
>gi|289807693|ref|ZP_06538322.1| hypothetical protein Salmonellaentericaenterica_26102 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 121
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 40 HILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAI 95
HI+PGD GY FG+H YTW+LI S++II+ ++V++ + + I
Sbjct: 9 HIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLAISSMNAAFRSLNINPNLFSIVG 68
Query: 96 YLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++F+ LI AN IST+LECG +C NP Y+LL+
Sbjct: 69 WVFLLLITANLISTVLECGGGECAANPVTYKLLS 102
>gi|282891246|ref|ZP_06299748.1| hypothetical protein pah_c050o008 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498743|gb|EFB41060.1| hypothetical protein pah_c050o008 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 169
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+ G L NL G++ HY++ +L + +A RQ+ +H+ PG + +PV G+ LYTWS
Sbjct: 48 VAAGLLLNLFFGVRMSHYALSLLSCLFGGFVALRQISLHVCPGFSTFGLPVLGLSLYTWS 107
Query: 62 LIFSLVIILFISVLMLF----DTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
I + IS+++ + ++ + + ++A+ L + + AN ++T L+CG
Sbjct: 108 FIVFACAVCAISLILFLYRPDKSEQVPLNQEWFSKLALGLTLAISLANILTTYLQCGWGV 167
Query: 118 C 118
C
Sbjct: 168 C 168
>gi|149178805|ref|ZP_01857386.1| hypothetical protein PM8797T_06467 [Planctomyces maris DSM 8797]
gi|148842346|gb|EDL56728.1| hypothetical protein PM8797T_06467 [Planctomyces maris DSM 8797]
Length = 196
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
Y + IL A+ I+TRQ+LIHI+P D GY PV G+HLYTW+L+ LV+++ + ++F
Sbjct: 74 YGMSILAAVCGACISTRQILIHIVPPDPGYGDPVLGLHLYTWALVVFLVVLIDSGLNLMF 133
Query: 79 DTAEIKVAKSP-----VREIAIYLFVFLIFANFISTILECGLTQCF-DNPTFYQL 127
E+ V P V + I + +I AN +S + G D+P Y+L
Sbjct: 134 -VPEL-VTDHPIEFNWVSKAVIGILGAVIIANLLSVFCQEGFHWVLPDDPVRYEL 186
>gi|332184486|gb|AEE26740.1| Putative inner membrane protein [Francisella cf. novicida 3523]
Length = 178
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Query: 13 GIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFI 72
G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+
Sbjct: 60 GNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILYA 119
Query: 73 SVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQL 127
++ L E K K + + ++AI L + L AN ++ +ECG C +P Y L
Sbjct: 120 AICGLITPNENKKKKLNILAKLAIILILILTLANTLNVFVECGPHLCPSDPNSYWL 175
>gi|213021900|ref|ZP_03336347.1| hypothetical protein Salmonelentericaenterica_03902 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 97
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Query: 35 RQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAEIKVAKSPVR--- 91
+ HI+PGD GY FG+H YTW+LI S++II+ ++V++ + +
Sbjct: 3 SAIFCHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLAISSMNAAFRSLNINPNL 62
Query: 92 -EIAIYLFVFLIFANFISTILECGLTQCFDNP 122
I ++F+ LI AN IST+LECG +C NP
Sbjct: 63 FSIVGWVFLLLITANLISTVLECGGGECAANP 94
>gi|163857909|ref|YP_001632207.1| hypothetical protein Bpet3596 [Bordetella petrii DSM 12804]
gi|163261637|emb|CAP43939.1| putative membrane protein [Bordetella petrii]
Length = 192
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M G+G L N+ G HY+++I ++ + A Q+L G+ P+FG+ +++W
Sbjct: 55 MAGVGLLLNIRLGPSPLHYAMVIAASLGGLVAAGNQLLAQASAGEPPSGPPLFGLSIHSW 114
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVA-KSPVREIAIY---LFVFLIFANFISTILECGLT 116
+ + ++ F +++ D A K PV A+ LF+ I N +T LECGL
Sbjct: 115 AFLAFCALLAFCVLMLAADRKWGDNALKKPVALPALIVMGLFLLAILVNVAATSLECGLG 174
Query: 117 QC 118
+C
Sbjct: 175 EC 176
>gi|295131064|ref|YP_003581727.1| hypothetical protein HMPREF0675_4582 [Propionibacterium acnes
SK137]
gi|291377094|gb|ADE00949.1| conserved hypothetical protein [Propionibacterium acnes SK137]
Length = 188
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
Y + IL A+ + R +L+HI PGD GY FG+ YTW+ I ++I F V+M F
Sbjct: 70 YGVSILSAVLGAAESARHILLHIQPGDPGYGSKAFGLSTYTWAFITFTIVIAFCGVMMTF 129
Query: 79 DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCF-DNPTFYQLLN 129
V + + ++LF ++ AN + + GL +P Y+L+
Sbjct: 130 APWLTPRGVKAHAISTVIMWLFALIVVANLVMIVFLEGLHFLLPGDPACYELVQ 183
>gi|50842993|ref|YP_056220.1| hypothetical protein PPA1515 [Propionibacterium acnes KPA171202]
gi|289426393|ref|ZP_06428136.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|289428753|ref|ZP_06430436.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|50840595|gb|AAT83262.1| conserved membrane protein [Propionibacterium acnes KPA171202]
gi|289153121|gb|EFD01839.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|289158151|gb|EFD06371.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|313763569|gb|EFS34933.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1]
gi|313773508|gb|EFS39474.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1]
gi|313793962|gb|EFS41986.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1]
gi|313801349|gb|EFS42600.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2]
gi|313807971|gb|EFS46452.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2]
gi|313811560|gb|EFS49274.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1]
gi|313813382|gb|EFS51096.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1]
gi|313816749|gb|EFS54463.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1]
gi|313819540|gb|EFS57254.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2]
gi|313822137|gb|EFS59851.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1]
gi|313823629|gb|EFS61343.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
gi|313825953|gb|EFS63667.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1]
gi|313829420|gb|EFS67134.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2]
gi|313831300|gb|EFS69014.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1]
gi|313834911|gb|EFS72625.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1]
gi|313839930|gb|EFS77644.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1]
gi|314914723|gb|EFS78554.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4]
gi|314919315|gb|EFS83146.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1]
gi|314920775|gb|EFS84606.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3]
gi|314924722|gb|EFS88553.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3]
gi|314930454|gb|EFS94285.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1]
gi|314954389|gb|EFS98795.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1]
gi|314957478|gb|EFT01581.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1]
gi|314962107|gb|EFT06208.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2]
gi|314963686|gb|EFT07786.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1]
gi|314968486|gb|EFT12584.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1]
gi|314974176|gb|EFT18272.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1]
gi|314976534|gb|EFT20629.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1]
gi|314978903|gb|EFT22997.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2]
gi|314984353|gb|EFT28445.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1]
gi|314986543|gb|EFT30635.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2]
gi|314990902|gb|EFT34993.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3]
gi|315079536|gb|EFT51529.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2]
gi|315081236|gb|EFT53212.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1]
gi|315083602|gb|EFT55578.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2]
gi|315087119|gb|EFT59095.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3]
gi|315089292|gb|EFT61268.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1]
gi|315095315|gb|EFT67291.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1]
gi|315099196|gb|EFT71172.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2]
gi|315106753|gb|EFT78729.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1]
gi|315108995|gb|EFT80971.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2]
gi|327328422|gb|EGE70184.1| hypothetical protein HMPREF9338_01439 [Propionibacterium acnes
HL096PA2]
gi|327329712|gb|EGE71468.1| hypothetical protein HMPREF9337_01776 [Propionibacterium acnes
HL096PA3]
gi|327334228|gb|EGE75942.1| hypothetical protein HMPREF9344_01129 [Propionibacterium acnes
HL097PA1]
gi|327444209|gb|EGE90863.1| hypothetical protein HMPREF9571_02340 [Propionibacterium acnes
HL043PA2]
gi|327444912|gb|EGE91566.1| hypothetical protein HMPREF9570_01974 [Propionibacterium acnes
HL043PA1]
gi|327446397|gb|EGE93051.1| hypothetical protein HMPREF9568_00979 [Propionibacterium acnes
HL013PA2]
gi|327452015|gb|EGE98669.1| hypothetical protein HMPREF9584_02221 [Propionibacterium acnes
HL092PA1]
gi|327454948|gb|EGF01603.1| hypothetical protein HMPREF9581_01136 [Propionibacterium acnes
HL087PA3]
gi|327457766|gb|EGF04421.1| hypothetical protein HMPREF9586_00342 [Propionibacterium acnes
HL083PA2]
gi|328752152|gb|EGF65768.1| hypothetical protein HMPREF9563_02421 [Propionibacterium acnes
HL020PA1]
gi|328755219|gb|EGF68835.1| hypothetical protein HMPREF9579_01246 [Propionibacterium acnes
HL087PA1]
gi|328758302|gb|EGF71918.1| hypothetical protein HMPREF9588_00942 [Propionibacterium acnes
HL025PA2]
gi|328760027|gb|EGF73608.1| hypothetical protein HMPREF9343_02235 [Propionibacterium acnes
HL099PA1]
gi|332675943|gb|AEE72759.1| putative transmembrane protein [Propionibacterium acnes 266]
Length = 216
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
Y + IL A+ + R +L+HI PGD GY FG+ YTW+ I ++I F V+M F
Sbjct: 98 YGVSILSAVLGAAESARHILLHIQPGDPGYGSKAFGLSTYTWAFITFTIVIAFCGVMMTF 157
Query: 79 DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCF-DNPTFYQLLN 129
V + + ++LF ++ AN + + GL +P Y+L+
Sbjct: 158 APWLTPRGVKAHAISTVIMWLFALIVVANLVMIVFLEGLHFLLPGDPACYELVQ 211
>gi|30025000|gb|AAO61477.1| unknown [Legionella pneumophila]
Length = 80
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+ F+ NL+ GI+ HY +M+L + I+ RQ+ IH+ PGD GY +FG+HLYTWS
Sbjct: 17 VGLCFVMNLMLGIRASHYGLMLLATLLGLSISVRQMYIHLTPGDPGYGGLIFGLHLYTWS 76
Query: 62 LI 63
I
Sbjct: 77 AI 78
>gi|315100321|gb|EFT72297.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1]
Length = 216
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
Y + IL A+ + R +L+HI PGD GY FG+ YTW+ I ++I F V+M F
Sbjct: 98 YGVSILSAVLGAAESARHILLHIQPGDPGYGSKTFGLSTYTWAFITFTIVIAFCGVMMTF 157
Query: 79 DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCF-DNPTFYQLLN 129
V + + ++LF ++ AN + + GL +P Y+L+
Sbjct: 158 APWLTPRGVKAHAISTVIMWLFALIVVANLVMIVFLEGLHFLLPGDPACYELVQ 211
>gi|282854664|ref|ZP_06263999.1| conserved hypothetical protein [Propionibacterium acnes J139]
gi|282582246|gb|EFB87628.1| conserved hypothetical protein [Propionibacterium acnes J139]
gi|314923761|gb|EFS87592.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1]
gi|314966225|gb|EFT10324.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2]
gi|314981991|gb|EFT26084.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3]
gi|315090902|gb|EFT62878.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4]
gi|315095115|gb|EFT67091.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1]
gi|315104344|gb|EFT76320.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2]
gi|327328107|gb|EGE69876.1| hypothetical protein HMPREF9341_01159 [Propionibacterium acnes
HL103PA1]
Length = 216
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
Y + IL A+ + R +L+HI PGD GY FG+ YTW+ I ++I F V+M F
Sbjct: 98 YGVSILSAVLGAAESARHILLHIQPGDPGYGSKAFGLSTYTWAFITFTIVIAFCGVMMTF 157
Query: 79 DT--AEIKVAKSPVREIAIYLFVFLIFANFI 107
V + + ++LF ++ AN +
Sbjct: 158 APWLTPRDVKAHAISTVIMWLFALIVVANLV 188
>gi|159038828|ref|YP_001538081.1| hypothetical protein Sare_3287 [Salinispora arenicola CNS-205]
gi|157917663|gb|ABV99090.1| conserved hypothetical protein [Salinispora arenicola CNS-205]
Length = 197
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 9/117 (7%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
Y + I+ A+ A RQ+L+HI+P D GY PV G+H YTW+ I V+++F V ++F
Sbjct: 74 YGLSIVAAVAGAAYAARQILLHIVPPDPGYGSPVLGLHPYTWAFITFCVVLVFCGVSLVF 133
Query: 79 DTAEIKVAKSPVR-----EIAIYLFVFLIFANFISTILECGLTQCFD-NPTFYQLLN 129
++ VR ++ I LF+ ++ AN ++ ++ G +PT Y++ +
Sbjct: 134 GR---ELVPRGVRFGWPSKVVIGLFLVIVAANLVAVFVQEGFHWFLPADPTRYEIFD 187
>gi|313836796|gb|EFS74510.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2]
gi|314929796|gb|EFS93627.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1]
gi|314972225|gb|EFT16322.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3]
Length = 218
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
Y + IL AI + R +L+HI PGD GY G+ YTW+ I +++I F V+M F
Sbjct: 100 YGVSILSAILGGAESARHILLHIQPGDPGYGSKALGLSTYTWAFITFVIVIAFCGVMMTF 159
Query: 79 DT--AEIKVAKSPVREIAIYLFVFLIFANFI 107
V + + ++LF ++ AN +
Sbjct: 160 APWLTPRGVKTHALSAVIMWLFALIVVANLV 190
>gi|302535716|ref|ZP_07288058.1| predicted protein [Streptomyces sp. C]
gi|302444611|gb|EFL16427.1| predicted protein [Streptomyces sp. C]
Length = 216
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLML- 77
+ + I+ A+ ++ QVL+HI+P D GY+ +FG+HLYTW+ I L+ +L +V ++
Sbjct: 95 WGVAIVSALIGSTVSASQVLMHIVPPDPGYAGALFGLHLYTWAAITFLLAVLAAAVNLVL 154
Query: 78 ---FDTAEIKVAKSPVREIAIYLFVFLIF---ANFISTILECGLT-QCFDNPTFYQ 126
F A +R A + L F +N ++ L GL Q +PT Y+
Sbjct: 155 AREFQPLGAAQASPALRRAAGFTLAVLAFFAVSNLVACFLLQGLHWQMPGDPTGYR 210
>gi|328907652|gb|EGG27416.1| conserved membrane protein [Propionibacterium sp. P08]
Length = 188
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
Y + IL AI + R +L+HI PGD GY G+ YTW+ I +++I F V+M F
Sbjct: 70 YGVSILSAILGGAESARHILLHIQPGDPGYGSKALGLSTYTWAFITFVIVIAFCGVMMTF 129
Query: 79 DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCF-DNPTFYQLLN 129
V + + ++LF ++ AN + + G +P Y+L+
Sbjct: 130 APWLTPRGVKTHALSAVIMWLFALIVVANLVMIVFLEGFHVLLPGDPACYELVQ 183
>gi|312882601|ref|ZP_07742341.1| membrane protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369761|gb|EFP97273.1| membrane protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 89
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 44 GDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVF 100
G GY P+FGMH YTW+ + +L +++L++ E S + L +
Sbjct: 1 GTPGYGSPIFGMHYYTWAFVLFGATVLGVALLLILWNEEWNSQSFTMSGFGRLVCLLAIT 60
Query: 101 LIFANFISTILECGLTQCFDNPTFYQLLN 129
+ NF+ST ECG +C +P Y L +
Sbjct: 61 AVALNFVSTFAECGPYECPADPVSYWLFS 89
>gi|255323029|ref|ZP_05364165.1| disulfide bond formation protein, DsbB family [Campylobacter showae
RM3277]
gi|255299891|gb|EET79172.1| disulfide bond formation protein, DsbB family [Campylobacter showae
RM3277]
Length = 515
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYT 59
++G+ + L G+K R+ + ++ GA + RQ + +G+ +FG H YT
Sbjct: 53 VVGVAGILILRYGLKARYIAAVLFGAAYGIFMTLRQASFSLYRDVGMGFGGDIFGAHTYT 112
Query: 60 WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVR--------EIAIYLFVFLIFANFIS 108
W ++ V+++ + ++MLF ++ +A+S R + I L +F+I +N +
Sbjct: 113 WGILVYWVVVVAMGLMMLFAKDKVVSGDIARSDTRIKPLNAYSKFVIALSLFVILSNAVQ 172
Query: 109 TILECGL 115
++ G+
Sbjct: 173 ALISAGI 179
>gi|254384695|ref|ZP_05000033.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194343578|gb|EDX24544.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 214
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
+ + ++ A + RQ +HILPG G V G+HLY W+ I + + I V++ F
Sbjct: 74 WGLALVAATGGSFASWRQTALHILPGAKGQGAEVLGLHLYVWAWILFQLSVAAIGVVLAF 133
Query: 79 -----DTAEIKVAKSPVREIAIYLFVFL 101
D A P R + ++ FL
Sbjct: 134 AHATADRAIPTSGPGPYRAVGLFALWFL 161
>gi|223039067|ref|ZP_03609358.1| disulfide bond formation protein, DsbB family [Campylobacter rectus
RM3267]
gi|222879706|gb|EEF14796.1| disulfide bond formation protein, DsbB family [Campylobacter rectus
RM3267]
Length = 515
Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYT 59
++G+ + L G+K R+ ++ GA + R + +G+ +FG H YT
Sbjct: 53 VVGVAGILILRYGLKARYIVAVLFGAAYGIFMTLRHASFSLYRDVGMGFGGDIFGAHTYT 112
Query: 60 WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVR--------EIAIYLFVFLIFANFIS 108
W ++ V+++ + ++MLF ++ +A++ R + I L +F+I +N +
Sbjct: 113 WGILVYWVVVVAMGLMMLFAKDKVVSNDIARADTRVKPLNAYSKFVIALSLFVILSNAVQ 172
Query: 109 TILECGL 115
++ G+
Sbjct: 173 ALISSGI 179
>gi|110633609|ref|YP_673817.1| disulfide bond formation protein DsbB, putative [Mesorhizobium sp.
BNC1]
gi|110284593|gb|ABG62652.1| disulfide bond formation protein DsbB, putative [Chelativorans sp.
BNC1]
Length = 215
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHI--LPGDLGYSIPVFGMHLYTWSL 62
G + +G R+ +L + +++ RQ L+ I PG VFG+H+ WS+
Sbjct: 72 GIMQQFRNGFSVRNTGFSLLFTVFLLVVSVRQTLLDIYPRPGHEYIGSAVFGLHMPVWSV 131
Query: 63 IFSLVIILFISVLMLFDTA-----EIKVAKSPV-REIAIYLFVFLI---FANFISTILEC 113
+ +L +++ + ++F + E ++ PV R +A L +++I NF S +L+C
Sbjct: 132 LIALALLIAFTFELIFWSGKNHMHEARLTGLPVIRGLATALSLYVILIGLVNFGSVVLQC 191
Query: 114 GLTQC 118
G+ +C
Sbjct: 192 GVGEC 196
>gi|167622296|ref|YP_001672590.1| disulfide bond formation protein DsbB [Shewanella halifaxensis
HAW-EB4]
gi|167352318|gb|ABZ74931.1| Disulphide bond formation protein DsbB [Shewanella halifaxensis
HAW-EB4]
Length = 483
Score = 42.7 bits (99), Expect = 0.014, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 7 LFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTWSLIFS 65
+F + G+K ++ +I+ A+ R HIL G+ +FG+H Y W ++
Sbjct: 56 IFIMRYGLKPKYIGALIITAVYGLWAGYRHSSAHILRDIGQGFGPAIFGVHTYVWVIVVF 115
Query: 66 LVIILFISVLMLFDTAEIKVAKSPVRE------IAIYLFVFLIFANFISTILECG 114
+I+LF VLML ++ V KS E I + +F+ +I N + + G
Sbjct: 116 AIILLFAGVLMLLQGDKL-VEKSDSSEWSLLNKITVNVFLVIIGFNIVQAFTQTG 169
>gi|312881155|ref|ZP_07740953.1| hypothetical protein VIBC2010_08138 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309371047|gb|EFP98501.1| hypothetical protein VIBC2010_08138 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 90
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP 43
M+ GFL N+ G QRHY +++LGA+ A RQ+ +H++P
Sbjct: 48 MVMFGFLLNVKYGPTQRHYGVILLGALFGAATALRQISLHVIP 90
>gi|157963725|ref|YP_001503759.1| disulfide bond formation protein DsbB [Shewanella pealeana ATCC
700345]
gi|157848725|gb|ABV89224.1| Disulphide bond formation protein DsbB [Shewanella pealeana ATCC
700345]
Length = 484
Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 7 LFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTWSLIFS 65
+F + G+K ++ +I+ A+ R HIL G+ +FG+H Y W ++
Sbjct: 57 IFIMRYGLKPKYIGALIITAVYGLWAGYRHSSAHILRDIGQGFGPAIFGVHTYVWVIVVF 116
Query: 66 LVIILFISVLMLFDTAEIKVAKSPVRE------IAIYLFVFLIFANFISTILECG 114
+I+LF VLML ++ V KS E + + +F+ +I N + + G
Sbjct: 117 AIILLFAGVLMLLQGDKL-VEKSDSSEWSLLNKVTVNVFLVIICFNIVQAFTQTG 170
>gi|83269709|ref|YP_419000.1| Frizzled protein [Brucella melitensis biovar Abortus 2308]
gi|237817269|ref|ZP_04596261.1| Frizzled protein [Brucella abortus str. 2308 A]
gi|82939983|emb|CAJ13012.1| Frizzled protein [Brucella melitensis biovar Abortus 2308]
gi|237788082|gb|EEP62298.1| Frizzled protein [Brucella abortus str. 2308 A]
Length = 208
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 71 GVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 130
Query: 63 IFSLVIILFISVLMLFDTAE-----IKVAKSPVRE-----IAIYLFVFLIFANFISTILE 112
+ +LV+I +V M+ ++ PV +A+Y+ N S ++
Sbjct: 131 LIALVLIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATI-NMASVFVQ 189
Query: 113 CGLTQC 118
CG+ QC
Sbjct: 190 CGVGQC 195
>gi|170728156|ref|YP_001762182.1| disulfide bond formation protein DsbB [Shewanella woodyi ATCC
51908]
gi|169813503|gb|ACA88087.1| Disulphide bond formation protein DsbB [Shewanella woodyi ATCC
51908]
Length = 482
Score = 40.8 bits (94), Expect = 0.054, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 13 GIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTWSLIFSLVIILF 71
G+K ++ +IL ++ R HIL G+ +FG+H Y W ++ LVI+LF
Sbjct: 64 GLKPKYLGALILASVYGLWAGYRHSSNHILKDIGQGFGPAIFGVHTYVWVMVVFLVILLF 123
Query: 72 ISVLML-----FDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECG 114
+VL++ E K + + + + +F+ +I N + + G
Sbjct: 124 AAVLLMLQGDKLSEKEDKNSWTLLNRSTVMVFLVVIGFNIVQAFSQTG 171
>gi|300313812|ref|YP_003777904.1| hypothetical protein Hsero_4530 [Herbaspirillum seropedicae SmR1]
gi|300076597|gb|ADJ65996.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 195
Score = 40.4 bits (93), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 14/117 (11%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G+GF+ NL G+K HY + +LGA+ T +IA RQ+ + + L + +F
Sbjct: 59 LTGMGFMKNLCQGVKSAHYGVALLGALLTGLIALRQLWMQPVAAMLSQPVCLF------- 111
Query: 61 SLIFSLVIILFISVLMLFDTAE-------IKVAKSPVREIAIYLFVFLIFANFISTI 110
+ +F+LV I+ I+ L+ +AE ++ A++ + + L+ A FI+T+
Sbjct: 112 AALFALVAIIVIACLLGVKSAEYPGTLLLLQTAEATDEKHGVPWGRILVCAVFIATV 168
>gi|224418545|ref|ZP_03656551.1| disulfide bond formation protein, DsbB family [Helicobacter
canadensis MIT 98-5491]
gi|253826902|ref|ZP_04869787.1| disulfide bond formation protein, DsbB family [Helicobacter
canadensis MIT 98-5491]
gi|313142073|ref|ZP_07804266.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253510308|gb|EES88967.1| disulfide bond formation protein, DsbB family [Helicobacter
canadensis MIT 98-5491]
gi|313131104|gb|EFR48721.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 505
Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G K ++ + +++ A + Q +H + D G+ + VFG+H Y W
Sbjct: 55 IGVMALFIVRYGFKGKYVAAILVMAAFGLYQSFAQYGMHAMRDLDQGFGLAVFGLHTYFW 114
Query: 61 SLIFSLVIILFISVLML----FDTAEIKVAKSPVREIAIYLFVFLIFANFI 107
+ I ++L + V+ F E+++A VRE F ++ I
Sbjct: 115 AEIVFWAVVLLLGVIFAFAPKFSEFEVEMAGKKVREWTKLSFASVVVVTLI 165
>gi|163844533|ref|YP_001622188.1| hypothetical protein BSUIS_B0362 [Brucella suis ATCC 23445]
gi|163675256|gb|ABY39366.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 208
Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 71 GVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 130
Query: 63 IFSLVIILFISVLMLFDTAE-----IKVAKSPVRE-----IAIYLFVFLIFANFISTILE 112
+ +L +I +V M+F ++ PV +A+Y+ N S ++
Sbjct: 131 LIALALIAAFAVQMMFWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATI-NMASVFVQ 189
Query: 113 CGLTQC 118
CG+ QC
Sbjct: 190 CGVGQC 195
>gi|23500110|ref|NP_699550.1| disulfide bond formation protein DsbB [Brucella suis 1330]
gi|161620429|ref|YP_001594315.1| disulfide bond formation protein DsbB [Brucella canis ATCC 23365]
gi|254702754|ref|ZP_05164582.1| disulfide bond formation protein DsbB [Brucella suis bv. 3 str.
686]
gi|23463704|gb|AAN33555.1| disulfide bond formation protein DsbB, putative [Brucella suis
1330]
gi|161337240|gb|ABX63544.1| disulfide bond formation protein DsbB [Brucella canis ATCC 23365]
Length = 208
Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 71 GVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 130
Query: 63 IFSLVIILFISVLMLFDTAE-----IKVAKSPVRE-----IAIYLFVFLIFANFISTILE 112
+ +L +I +V M+F ++ PV +A+Y+ N S ++
Sbjct: 131 LIALALIAAFAVQMMFWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATI-NMASVFVQ 189
Query: 113 CGLTQC 118
CG+ QC
Sbjct: 190 CGVGQC 195
>gi|260568339|ref|ZP_05838808.1| frizzled protein [Brucella suis bv. 4 str. 40]
gi|261753349|ref|ZP_05997058.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|260155004|gb|EEW90085.1| frizzled protein [Brucella suis bv. 4 str. 40]
gi|261743102|gb|EEY31028.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 203
Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 66 GVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 125
Query: 63 IFSLVIILFISVLMLFDTAE-----IKVAKSPVRE-----IAIYLFVFLIFANFISTILE 112
+ +L +I +V M+F ++ PV +A+Y+ N S ++
Sbjct: 126 LIALALIAAFAVQMMFWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATI-NMASVFVQ 184
Query: 113 CGLTQC 118
CG+ QC
Sbjct: 185 CGVGQC 190
>gi|223040679|ref|ZP_03610948.1| disulfide bond formation protein, DsbB family [Campylobacter rectus
RM3267]
gi|222878043|gb|EEF13155.1| disulfide bond formation protein, DsbB family [Campylobacter rectus
RM3267]
Length = 518
Score = 37.4 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGD--LGYSIPVFGMHLY 58
+IG+ +F L G K ++ S + + A ++ R + D +G+ +FG H Y
Sbjct: 49 LIGVLGIFILRYGAKIKYVSAVFICAAYGLFMSIRHTSLDGFAWDVGMGFGDAIFGAHTY 108
Query: 59 TWSLIFSLVIILFISVLMLF 78
TW ++L + V++LF
Sbjct: 109 TWGAFVYWAVVLVMPVMLLF 128
>gi|265985598|ref|ZP_06098333.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|264664190|gb|EEZ34451.1| conserved hypothetical protein [Brucella sp. 83/13]
Length = 203
Score = 37.0 bits (84), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 66 GIMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 125
Query: 63 IFSLVIILFISVLMLFDTAE-----IKVAKSPVRE-----IAIYLFVFLIFANFISTILE 112
+ +L +I +V M+ ++ K PV +A+Y+ N S ++
Sbjct: 126 LIALALIAAFAVQMMVWGGRHGQTITQIKKYPVINGLGTILALYVLAVATI-NMASVFVQ 184
Query: 113 CGLTQC 118
CG+ QC
Sbjct: 185 CGVGQC 190
>gi|254720565|ref|ZP_05182376.1| Frizzled protein [Brucella sp. 83/13]
gi|306838068|ref|ZP_07470925.1| Frizzled protein [Brucella sp. NF 2653]
gi|306406805|gb|EFM63027.1| Frizzled protein [Brucella sp. NF 2653]
Length = 208
Score = 37.0 bits (84), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 71 GIMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 130
Query: 63 IFSLVIILFISVLMLFDTAE-----IKVAKSPVRE-----IAIYLFVFLIFANFISTILE 112
+ +L +I +V M+ ++ K PV +A+Y+ N S ++
Sbjct: 131 LIALALIAAFAVQMMVWGGRHGQTITQIKKYPVINGLGTILALYVLAVATI-NMASVFVQ 189
Query: 113 CGLTQC 118
CG+ QC
Sbjct: 190 CGVGQC 195
>gi|154174738|ref|YP_001408864.1| DsbB family disulfide bond formation protein [Campylobacter curvus
525.92]
gi|112803685|gb|EAU01029.1| disulfide bond formation protein, DsbB family [Campylobacter curvus
525.92]
Length = 504
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K R+ +++++ A + IH + D G+ + VFG+H Y W
Sbjct: 55 IGVMALFIVRYGMKARYLAMILIMAGFGLWQSFAHYGIHAMRDLDQGFGLAVFGIHTYFW 114
Query: 61 SLIFSLVIILFISVLMLF 78
+ + ++L + V+ F
Sbjct: 115 AEVVFWAVVLLLGVIFFF 132
>gi|306845651|ref|ZP_07478220.1| Frizzled protein [Brucella sp. BO1]
gi|306273972|gb|EFM55799.1| Frizzled protein [Brucella sp. BO1]
Length = 208
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 11/125 (8%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 71 GIMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 130
Query: 63 IFSLVIILFISVLMLFDTAEIKVAKSPVREIAI--------YLFVFLIFA-NFISTILEC 113
+ +L +I +V M+ A + ++ + L+V I N S ++C
Sbjct: 131 LIALALIAAFAVQMMVWGGRHGQAIAQIKNYPVINGLGTILALYVLAIATINMASVFVQC 190
Query: 114 GLTQC 118
G+ QC
Sbjct: 191 GVGQC 195
>gi|315638055|ref|ZP_07893240.1| DsbB family disulfide bond formation protein [Campylobacter
upsaliensis JV21]
gi|315481903|gb|EFU72522.1| DsbB family disulfide bond formation protein [Campylobacter
upsaliensis JV21]
Length = 505
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 45 DLGYSIPVFGMHLYTWSLIFSLVIILFISVLML----FDTAEIKVAKSPVREIAIYLFVF 100
D G+ + VFG+H Y W+ + ++L + V+ F E ++A R+ + FV
Sbjct: 99 DQGFGLAVFGIHTYFWAEVVFWAVVLILGVIFAFAPKFSAFETEMAGEKFRQWTKFSFVA 158
Query: 101 LIFANFI 107
++ + FI
Sbjct: 159 VLISTFI 165
>gi|242310377|ref|ZP_04809532.1| disulfide bond formation protein [Helicobacter pullorum MIT
98-5489]
gi|239522775|gb|EEQ62641.1| disulfide bond formation protein [Helicobacter pullorum MIT
98-5489]
Length = 505
Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K ++ + +++ A + Q +H + D G+ + VFG+H Y W
Sbjct: 55 IGVMALFIVRYGMKGKYIAAILIMAAFGLYQSFAQYGMHAMRDLDQGFGLAVFGLHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDTA----EIKVAKSPVREIAIYLFVFLIFANFI 107
+ + ++L + V+ F ++++A RE F ++ I
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFGEFDVEMAGKKFREWTKLSFASVVIVTLI 165
>gi|306840813|ref|ZP_07473560.1| Frizzled protein [Brucella sp. BO2]
gi|306289208|gb|EFM60457.1| Frizzled protein [Brucella sp. BO2]
Length = 208
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 71 GIMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 130
Query: 63 IFSLVIILFISVLMLFDTAE-----IKVAKSPVRE-----IAIYLFVFLIFANFISTILE 112
+ +L +I +V M+ ++ PV +A+Y+ N S ++
Sbjct: 131 LIALALIAAFAVQMMVWGGRHGQTITQIKNHPVINGLGTILALYVLAVATI-NMASVFVQ 189
Query: 113 CGLTQC 118
CG+ QC
Sbjct: 190 CGVGQC 195
>gi|254695467|ref|ZP_05157295.1| Frizzled protein [Brucella abortus bv. 3 str. Tulya]
Length = 208
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 71 GVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 130
Query: 63 IFSLVIILFISVLMLFDTAE-----IKVAKSPVRE-----IAIYLFVFLIFANFISTILE 112
+ +L +I +V M+ ++ PV +A+Y+ N S ++
Sbjct: 131 LIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATI-NMASVFVQ 189
Query: 113 CGLTQC 118
CG+ QC
Sbjct: 190 CGVGQC 195
>gi|254699631|ref|ZP_05161459.1| Frizzled protein [Brucella suis bv. 5 str. 513]
gi|261750095|ref|ZP_05993804.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261739848|gb|EEY27774.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
Length = 203
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHI--LPGDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I PG VFG+H+ WS+
Sbjct: 71 GVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 130
Query: 63 IFSLVIILFISVLMLFDTAE-----IKVAKSPVRE-----IAIYLFVFLIFANFISTILE 112
+ +L +I +V M+ ++ PV +A+Y+ N S ++
Sbjct: 131 LIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATI-NMASVFVQ 189
Query: 113 CGLTQC 118
CG+ QC
Sbjct: 190 CGVGQC 195
>gi|148558668|ref|YP_001257372.1| putative disulfide bond formation protein DsbB [Brucella ovis ATCC
25840]
gi|148369953|gb|ABQ62825.1| putative disulfide bond formation protein DsbB [Brucella ovis ATCC
25840]
Length = 208
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 71 GVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 130
Query: 63 IFSLVIILFISVLMLFDTAE-----IKVAKSPVRE-----IAIYLFVFLIFANFISTILE 112
+ +L +I +V M+ ++ PV +A+Y+ N S ++
Sbjct: 131 LIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATI-NMASVFVQ 189
Query: 113 CGLTQC 118
CG+ QC
Sbjct: 190 CGVGQC 195
>gi|225628802|ref|ZP_03786836.1| Frizzled protein [Brucella ceti str. Cudo]
gi|254711589|ref|ZP_05173400.1| Frizzled protein [Brucella pinnipedialis B2/94]
gi|254712186|ref|ZP_05173997.1| Frizzled protein [Brucella ceti M644/93/1]
gi|254715256|ref|ZP_05177067.1| Frizzled protein [Brucella ceti M13/05/1]
gi|256029775|ref|ZP_05443389.1| Frizzled protein [Brucella pinnipedialis M292/94/1]
gi|256157948|ref|ZP_05455866.1| Frizzled protein [Brucella ceti M490/95/1]
gi|256253093|ref|ZP_05458629.1| Frizzled protein [Brucella ceti B1/94]
gi|260167119|ref|ZP_05753930.1| Frizzled protein [Brucella sp. F5/99]
gi|261756518|ref|ZP_06000227.1| frizzled protein [Brucella sp. F5/99]
gi|225616648|gb|EEH13696.1| Frizzled protein [Brucella ceti str. Cudo]
gi|261736502|gb|EEY24498.1| frizzled protein [Brucella sp. F5/99]
Length = 203
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 8/121 (6%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 71 GVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 130
Query: 63 IFSLVIILFISVLMLFDTAEIKVAKSPVRE-----IAIYLFVFLIFANFISTILECGLTQ 117
+ + + + ++ PV +A+Y+ N S ++CG+ Q
Sbjct: 131 LIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATI-NMASVFVQCGVGQ 189
Query: 118 C 118
C
Sbjct: 190 C 190
>gi|62317726|ref|YP_223579.1| disulfide bond formation protein DsbB [Brucella abortus bv. 1 str.
9-941]
gi|189022981|ref|YP_001932722.1| Frizzled protein [Brucella abortus S19]
gi|254691229|ref|ZP_05154483.1| Frizzled protein [Brucella abortus bv. 6 str. 870]
gi|254699016|ref|ZP_05160844.1| Frizzled protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254732463|ref|ZP_05191041.1| Frizzled protein [Brucella abortus bv. 4 str. 292]
gi|256256416|ref|ZP_05461952.1| Frizzled protein [Brucella abortus bv. 9 str. C68]
gi|297249776|ref|ZP_06933477.1| frizzled protein [Brucella abortus bv. 5 str. B3196]
gi|62197919|gb|AAX76218.1| hypothetical DsbB, disulfide bond formation protein [Brucella
abortus bv. 1 str. 9-941]
gi|189021555|gb|ACD74276.1| Frizzled protein [Brucella abortus S19]
gi|297173645|gb|EFH33009.1| frizzled protein [Brucella abortus bv. 5 str. B3196]
Length = 208
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 71 GVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 130
Query: 63 IFSLVIILFISVLMLFDTAE-----IKVAKSPVRE-----IAIYLFVFLIFANFISTILE 112
+ +L +I +V M+ ++ PV +A+Y+ N S ++
Sbjct: 131 LIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATI-NMASVFVQ 189
Query: 113 CGLTQC 118
CG+ QC
Sbjct: 190 CGVGQC 195
>gi|261216982|ref|ZP_05931263.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261220196|ref|ZP_05934477.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261319212|ref|ZP_05958409.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261319852|ref|ZP_05959049.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|265986787|ref|ZP_06099344.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265996457|ref|ZP_06109014.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260918780|gb|EEX85433.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260922071|gb|EEX88639.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261292542|gb|EEX96038.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261298435|gb|EEY01932.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|262550754|gb|EEZ06915.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264658984|gb|EEZ29245.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 198
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 8/121 (6%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 66 GVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 125
Query: 63 IFSLVIILFISVLMLFDTAEIKVAKSPVRE-----IAIYLFVFLIFANFISTILECGLTQ 117
+ + + + ++ PV +A+Y+ N S ++CG+ Q
Sbjct: 126 LIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATI-NMASVFVQCGVGQ 184
Query: 118 C 118
C
Sbjct: 185 C 185
>gi|260544967|ref|ZP_05820788.1| frizzled protein [Brucella abortus NCTC 8038]
gi|260756832|ref|ZP_05869180.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260760263|ref|ZP_05872611.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260763502|ref|ZP_05875834.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260882648|ref|ZP_05894262.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260098238|gb|EEW82112.1| frizzled protein [Brucella abortus NCTC 8038]
gi|260670581|gb|EEX57521.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260673923|gb|EEX60744.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260676940|gb|EEX63761.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260872176|gb|EEX79245.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
Length = 203
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 66 GVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 125
Query: 63 IFSLVIILFISVLMLFDTAE-----IKVAKSPVRE-----IAIYLFVFLIFANFISTILE 112
+ +L +I +V M+ ++ PV +A+Y+ N S ++
Sbjct: 126 LIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATI-NMASVFVQ 184
Query: 113 CGLTQC 118
CG+ QC
Sbjct: 185 CGVGQC 190
>gi|256015139|ref|YP_003105148.1| disulfide bond formation protein DsbB [Brucella microti CCM 4915]
gi|256059423|ref|ZP_05449625.1| Frizzled protein [Brucella neotomae 5K33]
gi|256111726|ref|ZP_05452710.1| Frizzled protein [Brucella melitensis bv. 3 str. Ether]
gi|294853352|ref|ZP_06794024.1| frizzled protein [Brucella sp. NVSL 07-0026]
gi|255997799|gb|ACU49486.1| disulfide bond formation protein DsbB [Brucella microti CCM 4915]
gi|294819007|gb|EFG36007.1| frizzled protein [Brucella sp. NVSL 07-0026]
Length = 208
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 71 GVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 130
Query: 63 IFSLVIILFISVLMLFDTAE-----IKVAKSPVRE-----IAIYLFVFLIFANFISTILE 112
+ +L +I +V M+ ++ PV +A+Y+ N S ++
Sbjct: 131 LIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATI-NMASVFVQ 189
Query: 113 CGLTQC 118
CG+ QC
Sbjct: 190 CGVGQC 195
>gi|261215853|ref|ZP_05930134.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260917460|gb|EEX84321.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
Length = 203
Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 66 GVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 125
Query: 63 IFSLVIILFISVLMLFDTAE-----IKVAKSPVRE-----IAIYLFVFLIFANFISTILE 112
+ +L +I +V M+ ++ PV +A+Y+ N S ++
Sbjct: 126 LIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATI-NMASVFVQ 184
Query: 113 CGLTQC 118
CG+ QC
Sbjct: 185 CGVGQC 190
>gi|326410532|gb|ADZ67596.1| Frizzled protein [Brucella melitensis M28]
gi|326553823|gb|ADZ88462.1| Frizzled protein [Brucella melitensis M5-90]
Length = 177
Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 40 GVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 99
Query: 63 IFSLVIILFISVLMLFDTAE-----IKVAKSPVRE-----IAIYLFVFLIFANFISTILE 112
+ +L +I +V M+ ++ PV +A+Y+ N S ++
Sbjct: 100 LIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATI-NMASVFVQ 158
Query: 113 CGLTQC 118
CG+ QC
Sbjct: 159 CGVGQC 164
>gi|261323389|ref|ZP_05962586.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|265993198|ref|ZP_06105755.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|261299369|gb|EEY02866.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|262764068|gb|EEZ10100.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
Length = 203
Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 66 GVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 125
Query: 63 IFSLVIILFISVLMLFDTAE-----IKVAKSPVRE-----IAIYLFVFLIFANFISTILE 112
+ +L +I +V M+ ++ PV +A+Y+ N S ++
Sbjct: 126 LIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATI-NMASVFVQ 184
Query: 113 CGLTQC 118
CG+ QC
Sbjct: 185 CGVGQC 190
>gi|265999159|ref|ZP_05465215.2| disulfide bond formation protein DsbB [Brucella melitensis bv. 2
str. 63/9]
gi|263092468|gb|EEZ16721.1| disulfide bond formation protein DsbB [Brucella melitensis bv. 2
str. 63/9]
Length = 180
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 5 GFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYTWSL 62
G + L G R I +L AI II+ RQ L+ I P G VFG+H+ WS+
Sbjct: 43 GVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPVWSI 102
Query: 63 IFSLVIILFISVLMLFDTAE-----IKVAKSPVRE-----IAIYLFVFLIFANFISTILE 112
+ +L +I +V M+ ++ PV +A+Y+ N S ++
Sbjct: 103 LIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATI-NMASVFVQ 161
Query: 113 CGLTQC 118
CG+ QC
Sbjct: 162 CGVGQC 167
>gi|222824494|ref|YP_002576068.1| disulfide bond formation protein, DsbB family [Campylobacter lari
RM2100]
gi|222539715|gb|ACM64816.1| disulfide bond formation protein, DsbB family [Campylobacter lari
RM2100]
Length = 505
Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K + + +++ + + H D G+ +P+FG+H Y W
Sbjct: 55 IGVAALFVVRYGMKGKFLAFLLIATAFGLWQSFNHISGHAHRDLDQGFGLPIFGLHTYFW 114
Query: 61 SLIFSLVIILFISVLML----FDTAEIKVAKSPVREIAIYLFVFLIFANFI 107
+ + ++L + V+ F + E ++ + R+++ + ++ FI
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFGSFEKEMEGASFRKLSKFNLAAMVIVAFI 165
>gi|153001068|ref|YP_001366749.1| disulfide bond formation protein DsbB [Shewanella baltica OS185]
gi|151365686|gb|ABS08686.1| Disulphide bond formation protein DsbB [Shewanella baltica OS185]
Length = 478
Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 13 GIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYTWSLIFSLVIIL 70
G+K ++ + ++ I +A+ I+ L D+G +S+ + G H YTW+L + +++
Sbjct: 62 GLKPKYIAALVWLGIYGAFMASVHTSIN-LGSDIGQGFSLKIMGAHTYTWALFVFVTVLI 120
Query: 71 FISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILECG 114
+++LML + K + ++A ++F+ +I N + + G
Sbjct: 121 VVALLMLTLGNKFPNNGYGKQPLDTLPKVACWIFLVVISGNIVQAFTQTG 170
>gi|146341159|ref|YP_001206207.1| putative sugar transferase family protein [Bradyrhizobium sp.
ORS278]
gi|146193965|emb|CAL77982.1| putative Bacterial sugar transferase family protein [Bradyrhizobium
sp. ORS278]
Length = 517
Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 16/97 (16%)
Query: 16 QRHYSIMILGAITTCIIATRQVLIHILPGDL--GYSIPVFGMHLYTWSLIFSLVIILFIS 73
R YS ++L I + T VL+ I+ + GY +P+ G H W + + ++ L +S
Sbjct: 47 HRAYSPIVLAGI---VRITDFVLLSIVGSAIYFGYVVPLSGFH---WEYLVA-ILGLAVS 99
Query: 74 VLMLFDTAEI---KVAKSPVRE----IAIYLFVFLIF 103
++ F A+I +V ++ VR+ I+ Y FVFL+F
Sbjct: 100 TVVCFQAADIYQLQVFRAQVRQMTRMISSYCFVFLLF 136
>gi|190348483|gb|EDK40941.2| hypothetical protein PGUG_05039 [Meyerozyma guilliermondii ATCC
6260]
Length = 484
Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 43 PGDLGYSIPVFGMHLYTWSLIFSLVIILFISV 74
P + Y++P G+ L+TW+LI + ++ +SV
Sbjct: 277 PRKISYALPTLGLGLFTWALILIIFVVYLLSV 308
>gi|146414227|ref|XP_001483084.1| hypothetical protein PGUG_05039 [Meyerozyma guilliermondii ATCC
6260]
Length = 484
Score = 33.9 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 43 PGDLGYSIPVFGMHLYTWSLIFSLVIILFISV 74
P + Y++P G+ L+TW+LI + ++ +SV
Sbjct: 277 PRKISYALPTLGLGLFTWALILIIFVVYLLSV 308
Searching..................................................done
Results from round 2
>gi|148974191|ref|ZP_01811724.1| hypothetical protein VSWAT3_13727 [Vibrionales bacterium SWAT-3]
gi|145965888|gb|EDK31136.1| hypothetical protein VSWAT3_13727 [Vibrionales bacterium SWAT-3]
Length = 179
Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats.
Identities = 49/132 (37%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GF+ N++ G + RHY I+++GA+ + RQV +H++PG GY P+FGMH YTW
Sbjct: 48 MVAFGFMLNVVYGPQPRHYGIVLIGALYGVATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAEIK---VAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + IL ++V+++ E S + +A L + ++ N I+T +ECG Q
Sbjct: 108 AFVLFAATILAVAVILILTNKEPSQEAYKMSNLGRVACLLAIVVVALNAIATFVECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y LLN
Sbjct: 168 CPDNPVSYWLLN 179
>gi|269962996|ref|ZP_06177333.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832239|gb|EEZ86361.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 179
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MI GFL N++ G + RHY ++++GA+ + RQV +H++PG GY P+FGMH YTW
Sbjct: 48 MIMFGFLLNVVYGPRSRHYGVVLIGALYGVATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + + I ++V+++ + E S + I L + ++ N I T ECG Q
Sbjct: 108 AFVLFVATIFAVAVILMLTSKEESPEPYEMSNLGRITCLLAISVVALNVIGTFAECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y L N
Sbjct: 168 CPDNPESYWLFN 179
>gi|330445116|ref|ZP_08308768.1| putative membrane protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489307|dbj|GAA03265.1| putative membrane protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 182
Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GF+ N++ G +QRHY ++++GA+ A RQV +H++PG G+ P+ GMH YTW
Sbjct: 48 MVMFGFMLNVVYGTQQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + + I +++L++ + + + L + + N +ST LECG Q
Sbjct: 108 AFVIFGMTIAGVALLLMLWNKDWTSENYQMNKFGKFVCILAIVAVLINVVSTFLECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y LL+
Sbjct: 168 CPDNPVSYWLLD 179
>gi|149187374|ref|ZP_01865672.1| hypothetical protein VSAK1_17662 [Vibrio shilonii AK1]
gi|148838910|gb|EDL55849.1| hypothetical protein VSAK1_17662 [Vibrio shilonii AK1]
Length = 182
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GFL N++ G +QRHY ++++GA+ A RQV +H++PG G+ P+ GMH YTW
Sbjct: 48 MVMFGFLLNIVYGTEQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLF---DTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + + I +++L++ D ++ + S + L + + N +ST +ECG Q
Sbjct: 108 AFVIFAMTIAGVALLLVLWNKDWSDDQYQMSMFGRVVCILAIVAVAINVLSTFIECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y LL+
Sbjct: 168 CPDNPVSYWLLD 179
>gi|209809797|ref|YP_002265336.1| membrane protein [Aliivibrio salmonicida LFI1238]
gi|208011360|emb|CAQ81816.1| membrane protein [Aliivibrio salmonicida LFI1238]
Length = 182
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 47/132 (35%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GF+ N+I G +QRHY ++++GA+ A RQV +H++PG G+ P+ GMH YTW
Sbjct: 48 MVMFGFMLNIIYGTQQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLF---DTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + ++ I+ ++VL++ D + + + A L + + N +ST +ECG Q
Sbjct: 108 AFVIFMMAIVGVAVLLMLWNNDWSTDTYQMNAFGKFACVLAIVAVLVNVLSTFVECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y LL+
Sbjct: 168 CPDNPVSYWLLD 179
>gi|90580939|ref|ZP_01236740.1| hypothetical protein VAS14_20796 [Vibrio angustum S14]
gi|90437817|gb|EAS63007.1| hypothetical protein VAS14_20796 [Vibrio angustum S14]
Length = 182
Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats.
Identities = 47/132 (35%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GF+ N++ G +QRHY ++++GA+ A RQV +H++PG G+ P+ GMH YTW
Sbjct: 48 MVMFGFMLNVVYGTQQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + + I +++L+L E + + L + + N IST LECG Q
Sbjct: 108 AFVIFAMAIAGVALLLLLWNKEWTSENYQMNKFGKFVCILAIVAVLINVISTFLECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y LL+
Sbjct: 168 CPDNPVSYWLLD 179
>gi|84386571|ref|ZP_00989598.1| hypothetical protein V12B01_17856 [Vibrio splendidus 12B01]
gi|84378676|gb|EAP95532.1| hypothetical protein V12B01_17856 [Vibrio splendidus 12B01]
Length = 183
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GF+ N++ G + RHY ++++GA+ + RQV +H++PG GY P+ GMH YTW
Sbjct: 48 MVAFGFMLNVVYGPQSRHYGVILIGALYGVATSLRQVSLHVIPGTPGYGSPILGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + + IL +SV+++ I L + ++ N I+T +ECG Q
Sbjct: 108 AFVLFVATILAVSVILMLTNKTESHEPYKMGNFGRIVCLLAIAVVALNAIATFVECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y LLN
Sbjct: 168 CPDNPVSYWLLN 179
>gi|156977740|ref|YP_001448646.1| hypothetical protein VIBHAR_06528 [Vibrio harveyi ATCC BAA-1116]
gi|156529334|gb|ABU74419.1| hypothetical protein VIBHAR_06528 [Vibrio harveyi ATCC BAA-1116]
Length = 179
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MI GFL N++ G + RHY ++++GA+ + RQV +H++PG GY P+FGMH YTW
Sbjct: 48 MIMFGFLLNVVYGPQSRHYGVVLIGALYGVATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + + I ++V+++ + E S + I L + ++ N I T ECG Q
Sbjct: 108 AFVLFVATIFAVAVILMLTSREESPEPYEMSNLGRITCLLAISVVALNVIGTFAECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y L N
Sbjct: 168 CPDNPESYWLFN 179
>gi|153832246|ref|ZP_01984913.1| putative membrane protein [Vibrio harveyi HY01]
gi|148871557|gb|EDL70412.1| putative membrane protein [Vibrio harveyi HY01]
Length = 179
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MI GFL N++ G + RHY ++++GA+ + RQV +H++PG GY P+FGMH YTW
Sbjct: 48 MIMFGFLLNVVYGPQSRHYGVVLIGALYGVATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + + I ++V+++ E S + I L + ++ N I T ECG Q
Sbjct: 108 AFVLFVATIFAVAVILMLTNKEESSEPYEMSNLGRITCLLAISVVALNVIGTFAECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y L N
Sbjct: 168 CPDNPESYWLFN 179
>gi|89076419|ref|ZP_01162744.1| hypothetical protein SKA34_21524 [Photobacterium sp. SKA34]
gi|89047887|gb|EAR53480.1| hypothetical protein SKA34_21524 [Photobacterium sp. SKA34]
Length = 182
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GF+ N++ G +QRHY ++++GA+ A RQV +H++PG G+ P+ GMH YTW
Sbjct: 48 MVMFGFMLNVVYGTQQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + + I +++L+L E + + L + + N IST +ECG Q
Sbjct: 108 AFVIFAMAIAGVALLLLLWNKEWTSENYQMNKFGKFVCILAIVAVLINVISTFIECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y LL+
Sbjct: 168 CPDNPVSYWLLD 179
>gi|260779144|ref|ZP_05888036.1| putative inner membrane protein [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605308|gb|EEX31603.1| putative inner membrane protein [Vibrio coralliilyticus ATCC
BAA-450]
Length = 179
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GFL N+ G +QRHY ++++GA+ A RQV +H++PG GY +FGMH YTW
Sbjct: 48 MVMFGFLLNVKYGPQQRHYGVVLIGALFGAATALRQVSLHVIPGTPGYGSAIFGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFD---TAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + IL +++L++ S + L + ++ N +ST +ECG Q
Sbjct: 108 AFVLFSATILAVAILLMLWNEAWNTEPFEMSKIGRWVCLLAISVVALNMLSTFVECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y L N
Sbjct: 168 CPDNPVSYWLFN 179
>gi|90580693|ref|ZP_01236497.1| hypothetical protein VAS14_16187 [Vibrio angustum S14]
gi|90438150|gb|EAS63337.1| hypothetical protein VAS14_16187 [Vibrio angustum S14]
Length = 179
Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GF+ N++ G + RHY ++++GA+ + RQV +H++PG GY P+FGMH YTW
Sbjct: 48 MVAFGFMLNVVYGPQSRHYGVVLIGALYGIATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPV---REIAIYLFVFLIFANFISTILECGLTQ 117
+ + + I ++V++L + + I + ++ N I+T +ECG Q
Sbjct: 108 AFVLFAITIFGVAVILLLTNKDESHESYNITHFGRIVCVFAIVVVALNVIATFVECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y L N
Sbjct: 168 CPDNPVSYWLFN 179
>gi|89072064|ref|ZP_01158660.1| hypothetical protein SKA34_08518 [Photobacterium sp. SKA34]
gi|89052165|gb|EAR57616.1| hypothetical protein SKA34_08518 [Photobacterium sp. SKA34]
Length = 179
Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GF+ N++ G + RHY ++++GA+ + RQV +H++PG GY P+FGMH YTW
Sbjct: 48 MVAFGFMLNVVYGPQSRHYGVVLIGALYGIATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPV---REIAIYLFVFLIFANFISTILECGLTQ 117
+ + + + ++V++L + + I + ++ N I+T +ECG Q
Sbjct: 108 AFVLFAITVFGVAVILLLTNKDESHESYNITHFGRIVCVFAIVVVALNVIATFVECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y L N
Sbjct: 168 CPDNPVSYWLFN 179
>gi|311108230|ref|YP_003981083.1| disulfide bond formation protein B [Achromobacter xylosoxidans A8]
gi|310762919|gb|ADP18368.1| disulfide bond formation protein B [Achromobacter xylosoxidans A8]
Length = 190
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 54/133 (40%), Positives = 75/133 (56%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G+GFL N+ G HY++ I GA+ + + RQVL+HI PGD GY P+ G+H YTW
Sbjct: 53 LAGMGFLLNMRLGPSPLHYAMSIAGALGGLLASGRQVLLHIAPGDPGYGSPLLGLHFYTW 112
Query: 61 SLIFSLVIILFISVLMLFDTAEIK----VAKSPVREIAIYLFVFLIFANFISTILECGLT 116
+ I + II+F +V++ D S + + + LF + AN ST LECG
Sbjct: 113 AFIAFIAIIVFCTVMLAVDRKWGDNMLRKPVSVLGVLVMALFFLMALANVGSTTLECGFG 172
Query: 117 QCFDNPTFYQLLN 129
C DNPT YQ LN
Sbjct: 173 PCPDNPTSYQWLN 185
>gi|300724708|ref|YP_003714033.1| hypothetical protein XNC1_3917 [Xenorhabdus nematophila ATCC 19061]
gi|297631250|emb|CBJ91945.1| conserved hypothetical protein; putative membrane protein
[Xenorhabdus nematophila ATCC 19061]
Length = 188
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 70/132 (53%), Positives = 86/132 (65%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MIG GFLFN+ GIK HYS+ I G + T +A RQV +HILPGD GY FG+H YTW
Sbjct: 56 MIGFGFLFNIYFGIKNAHYSLSIFGCLVTGFVAMRQVSLHILPGDTGYGSTFFGLHFYTW 115
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ I S++ I+ I+V+M AK + +IA+ LF FLI AN +STILECG Q
Sbjct: 116 AAILSILTIIAIAVIMPLKAGNTDSAKCTPPALGKIAMGLFAFLIAANLVSTILECGGGQ 175
Query: 118 CFDNPTFYQLLN 129
C DNPTFYQLL
Sbjct: 176 CDDNPTFYQLLQ 187
>gi|163801305|ref|ZP_02195204.1| hypothetical protein 1103602000598_AND4_10569 [Vibrio sp. AND4]
gi|159174794|gb|EDP59594.1| hypothetical protein AND4_10569 [Vibrio sp. AND4]
Length = 135
Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M+ GFL N++ G++Q+HY I+++GA+ + RQ+ +H++PG G+ P+ GMH YTW
Sbjct: 1 MVMFGFLLNVVFGVEQKHYGIVLVGALFGVATSLRQISLHVIPGTPGFGSPILGMHYYTW 60
Query: 61 SLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + + I +++L++ E S + L + + N IST +ECG +
Sbjct: 61 AFVIFCMAIAGVALLLILWNTEYSNKNYEMSTFGKSVCLLAIVAVLINVISTFVECGPFE 120
Query: 118 CFDNPTFYQLLN 129
C +P Y LL
Sbjct: 121 CPADPVSYWLLE 132
>gi|163868988|ref|YP_001610218.1| disulfide bond formation protein B [Bartonella tribocorum CIP
105476]
gi|161018665|emb|CAK02223.1| disulfide bond formation protein B [Bartonella tribocorum CIP
105476]
Length = 193
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFL N+ +K HY ++I+G + T +A RQV +HI P DLGY FG+H YTW
Sbjct: 54 LAGCGFLLNIHHKVKNTHYGMVIIGCMVTSAVAARQVFLHITPDDLGYGSTFFGLHFYTW 113
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK----SPVREIAIYLFVFLIFANFISTILECGLT 116
+ I S++ I ++ +M+ K + + + A +LFVFLI AN ISTILECG
Sbjct: 114 AFIISVLCIFAVASVMILGELAHKFKEFSAFPILSKTASFLFVFLIAANLISTILECGGG 173
Query: 117 QCFDNPTFYQLLN 129
QC D+P Y+LL+
Sbjct: 174 QCADDPVRYELLS 186
>gi|254780338|ref|YP_003064751.1| hypothetical protein CLIBASIA_01115 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040015|gb|ACT56811.1| hypothetical protein CLIBASIA_01115 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 129
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 129/129 (100%), Positives = 129/129 (100%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW
Sbjct: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFD 120
SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFD
Sbjct: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFD 120
Query: 121 NPTFYQLLN 129
NPTFYQLLN
Sbjct: 121 NPTFYQLLN 129
>gi|240851132|ref|YP_002972534.1| hypothetical membrane protein [Bartonella grahamii as4aup]
gi|240268255|gb|ACS51843.1| hypothetical membrane protein [Bartonella grahamii as4aup]
Length = 191
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 59/133 (44%), Positives = 81/133 (60%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFL N+ +K HY ++ILG + T +A RQV +HI P DLGY FG+H YTW
Sbjct: 54 LAGCGFLLNIHHKVKNTHYGMVILGCMVTSAVAARQVFLHITPDDLGYGSTFFGLHFYTW 113
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK----SPVREIAIYLFVFLIFANFISTILECGLT 116
+ I S++ I +S +M+ K + + + A +LFVFLI AN ISTILECG
Sbjct: 114 AFIISVLCIFAVSFVMILGELAHKFKEFSPFPFLSKTASFLFVFLIAANLISTILECGGG 173
Query: 117 QCFDNPTFYQLLN 129
QC D+P Y+LL+
Sbjct: 174 QCADDPVRYELLS 186
>gi|156977737|ref|YP_001448643.1| hypothetical protein VIBHAR_06525 [Vibrio harveyi ATCC BAA-1116]
gi|156529331|gb|ABU74416.1| hypothetical protein VIBHAR_06525 [Vibrio harveyi ATCC BAA-1116]
Length = 135
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 75/132 (56%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MI GFL N++ GI+Q+HY ++++GA+ + RQ+ +H++PG G+ + GMH YTW
Sbjct: 1 MIMFGFLLNVVYGIEQKHYGVILIGALFGIATSLRQISLHVIPGTPGFGSAILGMHYYTW 60
Query: 61 SLIFSLVIILFISVLMLFDT---AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + + + I++L++ + SP+ + L + + N IST +ECG +
Sbjct: 61 AFVIFCMAVAGIALLLILWDDRYSNQNHEMSPLAKSVCILAIATVLINVISTFIECGPFE 120
Query: 118 CFDNPTFYQLLN 129
C +P Y LL+
Sbjct: 121 CPADPVSYWLLD 132
>gi|37524258|ref|NP_927602.1| hypothetical protein plu0239 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36783681|emb|CAE12534.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 189
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 74/133 (55%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MIG GFLFNL GIK HY + ++G + T I+A RQV +HI PGDLGY +FG+H YTW
Sbjct: 56 MIGFGFLFNLCFGIKSAHYGLSLIGCVVTGIVAIRQVFLHITPGDLGYGSALFGIHFYTW 115
Query: 61 SLIFSLVIILFISVLMLF----DTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
+LI S++ I+ ISV+++ T E K S + +I I LFV LI AN ISTILECG
Sbjct: 116 ALICSVIAIIGISVMLILKSLEKTTEEKQKTSAIGQIIIGLFVILITANLISTILECGGG 175
Query: 117 QCFDNPTFYQLLN 129
QC DNPTFYQLL
Sbjct: 176 QCDDNPTFYQLLG 188
>gi|170737007|ref|YP_001778267.1| hypothetical protein Bcenmc03_4643 [Burkholderia cenocepacia MC0-3]
gi|169819195|gb|ACA93777.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3]
Length = 195
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 53/132 (40%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ GIGF N+ GI+ HY +++ A+ T +IA RQVL+HI P Y ++G+H YTW
Sbjct: 59 LAGIGFAMNIRYGIRGTHYCCVLVSAVATGVIAGRQVLLHISPDSGAYGSALWGLHFYTW 118
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLTQ 117
I S++IIL++S+L+ V S IA+ +F I AN +ST+LECG Q
Sbjct: 119 CFIASVLIILYVSLLLAVRRTNDTVQPASMSTSGRIAMAVFGLTIIANLVSTLLECGGGQ 178
Query: 118 CFDNPTFYQLLN 129
C +P Y+LL
Sbjct: 179 CASDPVEYELLE 190
>gi|290476875|ref|YP_003469786.1| hypothetical protein XBJ1_3906 [Xenorhabdus bovienii SS-2004]
gi|289176219|emb|CBJ83024.1| conserved hypothetical protein; putative membrane protein
[Xenorhabdus bovienii SS-2004]
Length = 184
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 66/132 (50%), Positives = 85/132 (64%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MIG+GFLFN+ GIK HYS+ +LG + T IA RQV +HILPGD GY G+H YTW
Sbjct: 52 MIGLGFLFNIYFGIKNAHYSLSLLGCLVTGFIAMRQVSLHILPGDTGYGSTFLGLHFYTW 111
Query: 61 SLIFSLVIILFISVLMLFDTAEIK---VAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + S++ I+ I+V+M + +IA+ LF FLI AN +ST+LECG Q
Sbjct: 112 AAVLSILTIIAIAVIMPLKAGNSDSSRYTPPTLGKIAMGLFAFLIAANLVSTVLECGSGQ 171
Query: 118 CFDNPTFYQLLN 129
C DNPTFYQLL
Sbjct: 172 CDDNPTFYQLLK 183
>gi|163801307|ref|ZP_02195206.1| hypothetical protein 1103602000598_AND4_10579 [Vibrio sp. AND4]
gi|159174796|gb|EDP59596.1| hypothetical protein AND4_10579 [Vibrio sp. AND4]
Length = 179
Score = 149 bits (378), Expect = 8e-35, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MI G L N++ G + RHY ++++GA+ + RQV +H++PG GY P+ GMH YTW
Sbjct: 48 MIMFGLLLNVVYGPQSRHYGVVLIGALYGVATSLRQVSLHVIPGTPGYGSPILGMHYYTW 107
Query: 61 SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
+ + + IL ++V+++ + + ++ L + ++ N I T ECG Q
Sbjct: 108 AFVLFVTTILVVAVILMLTNKGESSAPYEMTSLGRVSCLLAISVVALNVIGTFAECGPYQ 167
Query: 118 CFDNPTFYQLLN 129
C DNP Y + N
Sbjct: 168 CPDNPESYWMFN 179
>gi|253987664|ref|YP_003039020.1| hypothetical protein PAU_00181 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211638571|emb|CAR67191.1| putative membrane protein [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253779114|emb|CAQ82274.1| putative membrane protein [Photorhabdus asymbiotica]
Length = 189
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 71/133 (53%), Positives = 89/133 (66%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MIG GFLFNL GIK HY I ++G I T IIA RQV +HILPGD+GY +FG+H YTW
Sbjct: 56 MIGFGFLFNLRFGIKSAHYGIALIGCIVTGIIAIRQVFLHILPGDIGYGSALFGIHFYTW 115
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSP----VREIAIYLFVFLIFANFISTILECGLT 116
+L+ S++ I+ ISV+++ + E + +I I FV LI AN IST+LECG
Sbjct: 116 ALLSSVIAIIAISVMLILKSLEKTTEEKGNTPVFGQILIGFFVLLITANLISTVLECGGG 175
Query: 117 QCFDNPTFYQLLN 129
QC DNPTFYQLL
Sbjct: 176 QCDDNPTFYQLLG 188
>gi|49476082|ref|YP_034123.1| hypothetical protein BH14180 [Bartonella henselae str. Houston-1]
gi|49238890|emb|CAF28183.1| hypothetical protein BH14180 [Bartonella henselae str. Houston-1]
Length = 193
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 58/133 (43%), Positives = 81/133 (60%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFL N+ +K HY ++ILG + T I+A RQV +HI P DLGY FG+H YTW
Sbjct: 54 LAGCGFLLNIHHKVKNTHYGMVILGCMVTSIVAARQVFLHITPDDLGYGSTFFGLHFYTW 113
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK----SPVREIAIYLFVFLIFANFISTILECGLT 116
+ I +++ I ++ LM+ K + ++A LFVFLI AN IST+LECG
Sbjct: 114 AFIIAVLCIFAVAFLMILSELSYKFKVFAPFPLLSKMASGLFVFLIAANLISTVLECGTG 173
Query: 117 QCFDNPTFYQLLN 129
QC D+P Y+LL+
Sbjct: 174 QCADDPVRYELLS 186
>gi|293607074|ref|ZP_06689417.1| inner protein [Achromobacter piechaudii ATCC 43553]
gi|292814564|gb|EFF73702.1| inner protein [Achromobacter piechaudii ATCC 43553]
Length = 190
Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats.
Identities = 49/132 (37%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G+GFL N+ G HY + I ++ + + RQVL+H+ PGD GY P GMH YTW
Sbjct: 53 LAGVGFLLNMRLGPSPMHYGMSIAASLGGMVASGRQVLLHLAPGDPGYGSPFLGMHFYTW 112
Query: 61 SLIFSLVIILFISVLMLFDTAE----IKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
+ I II+F ++ D +K S + + + LF + AN ST LECG
Sbjct: 113 AFIAFGAIIVFCVLMQTADRKWGDSMLKKPVSALGILVMALFFVMTLANLGSTTLECGFG 172
Query: 117 QCFDNPTFYQLL 128
C DNP Y L
Sbjct: 173 PCPDNPETYLWL 184
>gi|49474631|ref|YP_032673.1| hypothetical protein BQ11210 [Bartonella quintana str. Toulouse]
gi|49240135|emb|CAF26582.1| hypothetical protein BQ11210 [Bartonella quintana str. Toulouse]
Length = 193
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 54/133 (40%), Positives = 81/133 (60%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFLFN+ +K HY ++ILG + T ++A RQV +HI P DLGY FG+H YTW
Sbjct: 54 LAGCGFLFNIHHKVKNTHYGMVILGCMVTSVVAARQVFLHITPDDLGYGSTFFGLHFYTW 113
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK----SPVREIAIYLFVFLIFANFISTILECGLT 116
+ + +++ I ++ +M+ K + A +LF+FLI AN +ST+LECG
Sbjct: 114 AFLIAVLCIFAVTFIMILSELAHKFKVFSPIPLLSGAASFLFIFLIAANLVSTVLECGGG 173
Query: 117 QCFDNPTFYQLLN 129
QC D+P Y+LL+
Sbjct: 174 QCADDPVRYELLS 186
>gi|170735271|ref|YP_001774385.1| hypothetical protein Bcenmc03_6778 [Burkholderia cenocepacia MC0-3]
gi|169821309|gb|ACA95890.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3]
Length = 195
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 52/132 (39%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ GIGF N+ GI+ HY +++ A+ T +IA RQVL+HI P Y ++G+H YTW
Sbjct: 59 LAGIGFAMNVRYGIRGTHYCCVLVSAVATGVIAGRQVLLHISPDSGAYGSALWGLHFYTW 118
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPV---REIAIYLFVFLIFANFISTILECGLTQ 117
I S++IIL++S+L+ V + IA+ +F I AN +ST+LECG Q
Sbjct: 119 CFIASVLIILYVSLLLAVRRTSHTVQPVSMTTGGRIAMAVFGLTIIANLVSTLLECGGGQ 178
Query: 118 CFDNPTFYQLLN 129
C +P Y+LL
Sbjct: 179 CESDPVAYELLE 190
>gi|294141630|ref|YP_003557608.1| disulfide bond formation protein B [Shewanella violacea DSS12]
gi|293328099|dbj|BAJ02830.1| disulfide bond formation protein B, putative [Shewanella violacea
DSS12]
Length = 182
Score = 146 bits (370), Expect = 7e-34, Method: Composition-based stats.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 6/134 (4%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+ G L N++ G + HY IM+ GA+ +A RQV +H++PG Y P H YTW+
Sbjct: 49 VMFGLLCNVVYGPRTSHYGIMLFGALFGAAVALRQVSLHVIPGTPFYGDPFLSFHFYTWA 108
Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSP------VREIAIYLFVFLIFANFISTILECGL 115
I VIIL +V++ F + +V + ++A+ + + + N +ST ECG
Sbjct: 109 FITFAVIILGTAVMLSFSSQYKEVKHQTLGEMPLLSKLAVGIVLLVTLMNVLSTFAECGP 168
Query: 116 TQCFDNPTFYQLLN 129
+C +P Y L +
Sbjct: 169 FECPADPVQYWLFS 182
>gi|148978274|ref|ZP_01814792.1| hypothetical protein VSWAT3_15147 [Vibrionales bacterium SWAT-3]
gi|145962575|gb|EDK27852.1| hypothetical protein VSWAT3_15147 [Vibrionales bacterium SWAT-3]
Length = 129
Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 7 LFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSL 66
+ N++ G +QRHY I+++GA+ + RQ+ +H++PG GY +FGMH YTW+ I
Sbjct: 1 MLNVVYGAEQRHYGIVLIGALFGAATSLRQISLHVIPGTPGYGSAIFGMHYYTWAFIIFG 60
Query: 67 VIILFISVLMLFDTAEIK---VAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPT 123
+ I +++L++ + K + + + + + N IST LECG +C +P
Sbjct: 61 MTIFGVALLLMLWNNDCKTKEYQMTTFGKSVCIIAIITVLINVISTFLECGPYECPADPI 120
Query: 124 FYQ 126
Y
Sbjct: 121 SYW 123
>gi|238919044|ref|YP_002932558.1| hypothetical protein NT01EI_1112 [Edwardsiella ictaluri 93-146]
gi|238868612|gb|ACR68323.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 189
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 63/133 (47%), Positives = 86/133 (64%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+IG GFLFN+ GIK HY I ++G + T IA RQ+ +HILPGD GY +H YTW
Sbjct: 56 LIGFGFLFNVRFGIKGAHYGIALIGCVITGSIAARQMFLHILPGDSGYGSTFLELHFYTW 115
Query: 61 SLIFSLVIILFISVLMLF----DTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
+L+ S+++I+ I+V+M+ T ++ +IAI LF +I AN IST+LECG
Sbjct: 116 ALLASIIVIVAIAVMMMLGEVRPTTGETISVPLWGKIAIALFALVIVANLISTVLECGGG 175
Query: 117 QCFDNPTFYQLLN 129
QC DNPTFYQL+
Sbjct: 176 QCADNPTFYQLIG 188
>gi|90409260|ref|ZP_01217363.1| hypothetical protein PCNPT3_04227 [Psychromonas sp. CNPT3]
gi|90309633|gb|EAS37815.1| hypothetical protein PCNPT3_04227 [Psychromonas sp. CNPT3]
Length = 182
Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats.
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 6/134 (4%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+ G L N++ G + HY IMI GA+ +A RQ+ +H++PG Y P F H YTW+
Sbjct: 49 VLFGLLCNVVYGPRTSHYGIMIFGALFGAGVALRQISLHVIPGTPFYGDPFFSFHFYTWA 108
Query: 62 LIFSLVIILFISVLMLFDTAEIK------VAKSPVREIAIYLFVFLIFANFISTILECGL 115
I +VI+ +V++ F + + V + ++AI L +F+ N +ST ECG
Sbjct: 109 FISFVVIVFGSAVMLSFSSQYKEIKYQTFVQMPVLSKVAIALVLFVTLLNVLSTFAECGP 168
Query: 116 TQCFDNPTFYQLLN 129
+C +P Y L N
Sbjct: 169 FECPSDPIQYWLFN 182
>gi|317405865|gb|EFV86148.1| hypothetical protein HMPREF0005_02716 [Achromobacter xylosoxidans
C54]
Length = 190
Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G+G L NL G HY++ I ++ + + RQVL+HI PGD GY P G+H YTW
Sbjct: 53 LAGVGLLLNLRLGPSPMHYAMTIAASLGGMVASGRQVLLHIAPGDAGYGTPFLGLHFYTW 112
Query: 61 SLIFSLVIILFISVLMLFDTAEI----KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
+ I +I+F +++ D K S + + + LF ++ AN ST L+CG
Sbjct: 113 AFIAFGALIVFCVLMLSVDRKWGDNMLKRPVSVLGVVIMALFFIMVLANLGSTTLQCGFG 172
Query: 117 QCFDNPTFYQLLN 129
C DNP Y L
Sbjct: 173 PCPDNPAGYLWLG 185
>gi|260434000|ref|ZP_05787971.1| hypothetical protein SL1157_3162 [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417828|gb|EEX11087.1| hypothetical protein SL1157_3162 [Silicibacter lacuscaerulensis
ITI-1157]
Length = 189
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 81/135 (60%), Gaps = 7/135 (5%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+G NL+ G + +HY++M++ A+ ++ RQ+L+HI+PG Y PV G+H YTW+
Sbjct: 49 VGVGLGLNLLYGPRPQHYAMMLIAALYGGSVSVRQILLHIVPGTGHYGSPVLGLHYYTWA 108
Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSP-------VREIAIYLFVFLIFANFISTILECG 114
I +I+L +++++FD + ++ + ++A ++ + L N ST+LECG
Sbjct: 109 AICFFLILLGTAIMLMFDRQYVDDRRAQPRFGGNRLAKVAFFIMLGLAVLNAGSTLLECG 168
Query: 115 LTQCFDNPTFYQLLN 129
C D PT Y+L++
Sbjct: 169 PGVCADPPTDYKLID 183
>gi|158422613|ref|YP_001523905.1| putative transmembrane protein [Azorhizobium caulinodans ORS 571]
gi|158329502|dbj|BAF86987.1| putative transmembrane protein [Azorhizobium caulinodans ORS 571]
Length = 185
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 48/134 (35%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
G N+ G + HY+I+IL A +I+ RQ L+HI+PG Y + G+H Y+W+
Sbjct: 49 AAFGLALNVKFGPRPSHYAIVILSAFCGGLISGRQTLLHIVPGTGTYGDALLGLHFYSWA 108
Query: 62 LIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGL 115
L+ VIIL +++LF D + + + L L F N ST+LECG
Sbjct: 109 LVLFCVIILGCGLMLLFDQQFAGDNRPLGPRAATFGLAMVVLGFLLAFGNGASTVLECGG 168
Query: 116 TQCFDNPTFYQLLN 129
C DNPT YQL
Sbjct: 169 GLCPDNPTSYQLFQ 182
>gi|254480095|ref|ZP_05093343.1| hypothetical protein GPB2148_3132 [marine gamma proteobacterium
HTCC2148]
gi|214039657|gb|EEB80316.1| hypothetical protein GPB2148_3132 [marine gamma proteobacterium
HTCC2148]
Length = 181
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+ IG L N+ G + HY I ++ +A RQV +H++PG GY P G+H YTW+
Sbjct: 47 VSIGLLLNVTHGPRPSHYGFAIAASVAGGAMALRQVSLHVIPGTPGYGSPFLGLHFYTWA 106
Query: 62 LIFSLVIILFISVLMLFDT-----AEIKVAKSPVR-EIAIYLFVFLIFANFISTILECGL 115
+ +I I+++ ++ + P+ ++AI + +I N ++ ECG
Sbjct: 107 FLLFAFMIAAIAMISSLPRQYDDLGWLQWRQQPLLCKLAIVVITIIISLNALAAFSECGP 166
Query: 116 TQCFDNPTFYQLLN 129
C DNP Y L
Sbjct: 167 GTCPDNPEQYWLFQ 180
>gi|283479837|emb|CAY75753.1| hypothetical protein EPYR_03373 [Erwinia pyrifoliae DSM 12163]
Length = 211
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 53/125 (42%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
Query: 8 FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67
FNL G ++ HY ++I+GA+ +ATR V +HI PGD GY +P G+HLYTWSLI ++
Sbjct: 87 FNLYFGNRKLHYGMVIIGALALAAVATRHVFLHITPGDTGYGLPFLGIHLYTWSLILAVA 146
Query: 68 IILFISVLMLFDTAEIK---VAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124
II+ ++V ++ V KS + + ++ ++ AN ST+L+CG QC DNPT+
Sbjct: 147 IIIGVAVTLMITPDAATAPVVIKSFTQRFLMIIYALILVANLSSTVLQCGGGQCDDNPTY 206
Query: 125 YQLLN 129
YQLL
Sbjct: 207 YQLLK 211
>gi|332184421|gb|AEE26675.1| Putative inner membrane protein [Francisella cf. novicida 3523]
Length = 189
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 53 IGFGFLLNMRYNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSRVLGMHMYSWV 111
Query: 62 LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109
+ S++ I++I+++M + + + +I +F+ ++FAN ST
Sbjct: 112 FVISMIAIIYIAIVMSYPRQYELRKRPQEISEAKNNIIRILTQIVFIIFLIVVFANVAST 171
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187
>gi|300693183|ref|YP_003749156.1| hypothetical protein RPSI07_mp0150 [Ralstonia solanacearum PSI07]
gi|299075220|emb|CBJ34509.1| conserved membrane protein of unknown function [Ralstonia
solanacearum PSI07]
Length = 183
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 6/134 (4%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
G+G NL G + HY++MIL ++ +IA RQ+L+HI+PG Y ++G+HLYT +
Sbjct: 49 AGVGLALNLRFGSRPAHYALMILASLAGAVIAGRQILLHIVPGTGTYGEALWGLHLYTLA 108
Query: 62 LIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGL 115
I V+I +V++ D V S A+ L L N + T LECG
Sbjct: 109 FIAFSVMIAGTAVMLFLERSSEADEGPALVPPSRAALTAVVLLAVLTLGNVVGTFLECGG 168
Query: 116 TQCFDNPTFYQLLN 129
C D+P Y+LL
Sbjct: 169 GMCADDPVIYELLG 182
>gi|62263489|gb|AAX78165.1| unknown protein [synthetic construct]
Length = 224
Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 79 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 137
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREI-----------AIYLFVFLIFANFIST 109
+ S++ I++I+++M + E++ + E +F+ ++FAN +ST
Sbjct: 138 FVISMIAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 197
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 198 FFECGLHECPDDPTRY 213
>gi|292486979|ref|YP_003529849.1| hypothetical protein EAMY_0491 [Erwinia amylovora CFBP1430]
gi|292900634|ref|YP_003540003.1| disulfide bond formation membrane protein [Erwinia amylovora ATCC
49946]
gi|291200482|emb|CBJ47611.1| putative disulfide bond formation membrane protein [Erwinia
amylovora ATCC 49946]
gi|291552396|emb|CBA19441.1| hypothetical protein EAMY_0491 [Erwinia amylovora CFBP1430]
Length = 183
Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats.
Identities = 53/125 (42%), Positives = 81/125 (64%), Gaps = 3/125 (2%)
Query: 8 FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67
FNL G ++ HY ++I GA+ +ATR V +HI+PGD GY +P G+HLYTWSLI ++
Sbjct: 59 FNLYFGNRKLHYGMVIFGALALATVATRHVFLHIMPGDTGYGLPFLGIHLYTWSLILAVA 118
Query: 68 IILFISVLMLFDTAEIK---VAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124
+I ++V ++ V KS ++I + ++ ++ AN +ST+L+CG QC DNPT+
Sbjct: 119 LIFGVAVTLMITPDAATPSVVNKSITQKILMIIYALIVVANLLSTVLQCGGGQCDDNPTY 178
Query: 125 YQLLN 129
YQLL
Sbjct: 179 YQLLK 183
>gi|310766387|gb|ADP11337.1| hypothetical protein EJP617_16560 [Erwinia sp. Ejp617]
Length = 183
Score = 137 bits (345), Expect = 5e-31, Method: Composition-based stats.
Identities = 54/125 (43%), Positives = 80/125 (64%), Gaps = 3/125 (2%)
Query: 8 FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67
FNL G ++ HY ++I+GA+ +ATR V +HI PGD GY +P G+HLYTWSLI ++
Sbjct: 59 FNLYFGNRKLHYGMVIIGALALAAVATRHVFLHITPGDTGYGLPFLGIHLYTWSLILAVA 118
Query: 68 IILFISVLMLFDTAEIK---VAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124
II+ ++V ++ V KS ++ + +F ++ AN ST+L+CG QC DNPT+
Sbjct: 119 IIIGVAVTLMITPDAATAPIVHKSLTQKCLMVIFALMMVANLASTVLQCGGGQCDDNPTY 178
Query: 125 YQLLN 129
YQLL
Sbjct: 179 YQLLK 183
>gi|194323862|ref|ZP_03057638.1| hypothetical protein FTE_0697 [Francisella tularensis subsp.
novicida FTE]
gi|208779953|ref|ZP_03247297.1| hypothetical protein FTG_0700 [Francisella novicida FTG]
gi|194322226|gb|EDX19708.1| hypothetical protein FTE_0697 [Francisella tularensis subsp.
novicida FTE]
gi|208744408|gb|EDZ90708.1| hypothetical protein FTG_0700 [Francisella novicida FTG]
Length = 194
Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 58 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 116
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREI-----------AIYLFVFLIFANFIST 109
+ S+V I++I+++M + E++ + E +F+ ++FAN +ST
Sbjct: 117 FVISMVAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 176
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 177 FFECGLHECPDDPTRY 192
>gi|254374698|ref|ZP_04990179.1| hypothetical protein FTDG_00873 [Francisella novicida GA99-3548]
gi|151572417|gb|EDN38071.1| hypothetical protein FTDG_00873 [Francisella novicida GA99-3548]
Length = 194
Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 58 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 116
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREI-----------AIYLFVFLIFANFIST 109
+ S+V I++I+++M + E++ + E +F+ ++FAN +ST
Sbjct: 117 FVISMVAIIYIAIVMSYPRQYELRRQPQQISEAKNNIMRLFIQIIFIIFLLVVFANVVST 176
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 177 FFECGLHECPDDPTRY 192
>gi|312171047|emb|CBX79306.1| hypothetical protein EAIL5_0486 [Erwinia amylovora ATCC BAA-2158]
Length = 183
Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats.
Identities = 53/125 (42%), Positives = 81/125 (64%), Gaps = 3/125 (2%)
Query: 8 FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67
FNL G ++ HY ++I GA+ +ATR V +HI+PGD GY +P G+HLYTWSLI ++
Sbjct: 59 FNLYFGNRKLHYGMVIFGALALATVATRHVFLHIMPGDTGYGLPFLGIHLYTWSLILAVA 118
Query: 68 IILFISVLMLFDT---AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124
+I+ ++V ++ V KS +I + ++ ++ AN +ST+L+CG QC DNPT+
Sbjct: 119 LIIGVAVTLMITPDAGTPYVVNKSITEKILMIIYALIMVANLLSTVLQCGGGQCDDNPTY 178
Query: 125 YQLLN 129
YQLL
Sbjct: 179 YQLLK 183
>gi|134301613|ref|YP_001121581.1| hypothetical protein FTW_0552 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134049390|gb|ABO46461.1| hypothetical protein FTW_0552 [Francisella tularensis subsp.
tularensis WY96-3418]
Length = 194
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 58 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 116
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREI-----------AIYLFVFLIFANFIST 109
+ S++ I++I+++M + E++ + E +F+ ++FAN +ST
Sbjct: 117 FVISMIAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 176
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 177 FFECGLHECPDDPTRY 192
>gi|254373241|ref|ZP_04988730.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570968|gb|EDN36622.1| conserved hypothetical protein [Francisella novicida GA99-3549]
Length = 194
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 58 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 116
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREI-----------AIYLFVFLIFANFIST 109
+ S++ I++I+++M + E++ + E +F+ ++FAN +ST
Sbjct: 117 FVISMIAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 176
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 177 FFECGLHECPDDPTRY 192
>gi|298293265|ref|YP_003695204.1| disulfide bond formation protein DsbB [Starkeya novella DSM 506]
gi|296929776|gb|ADH90585.1| Disulfide bond formation protein DsbB [Starkeya novella DSM 506]
Length = 199
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 51/132 (38%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+G NL G + HY+I IL A+ +I+TRQVL+HI+PG + G+H Y+W+
Sbjct: 58 VGLGLALNLRFGPRPSHYAIAILSAMAGGVISTRQVLLHIVPGSGTFGADFLGLHFYSWA 117
Query: 62 LIFSLVIILFISVLMLFD----TAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
L+ +VI +VL+LFD + + A L L N +ST+LEC
Sbjct: 118 LVLFIVIAAGCAVLLLFDRQFAPGTARYRLGGLALAAFALIALLALGNGVSTVLECAGGL 177
Query: 118 CFDNPTFYQLLN 129
C DNPT YQLL
Sbjct: 178 CPDNPTTYQLLE 189
>gi|332678603|gb|AEE87732.1| Putative inner membrane protein [Francisella cf. novicida Fx1]
Length = 189
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREI-----------AIYLFVFLIFANFIST 109
+ S+V I++I+++M + E++ + E +F+ ++FAN +ST
Sbjct: 112 FVISMVAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187
>gi|259909747|ref|YP_002650103.1| hypothetical protein EpC_31220 [Erwinia pyrifoliae Ep1/96]
gi|224965369|emb|CAX56901.1| putative membrane protein [Erwinia pyrifoliae Ep1/96]
Length = 183
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 53/125 (42%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
Query: 8 FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67
FNL G ++ HY ++I+GA+ +ATR V +HI PGD GY +P G+HLYTWSLI ++
Sbjct: 59 FNLYFGNRKLHYGMVIIGALALAAVATRHVFLHITPGDTGYGLPFLGIHLYTWSLILAVA 118
Query: 68 IILFISVLMLFDTAEIK---VAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124
II+ ++V ++ V KS + + ++ ++ AN ST+L+CG QC DNPT+
Sbjct: 119 IIIGVAVTLMITPDAATAPVVIKSFTQRFLMIIYALILVANLSSTVLQCGGGQCDDNPTY 178
Query: 125 YQLLN 129
YQLL
Sbjct: 179 YQLLK 183
>gi|320085627|emb|CBY95405.1| hypothetical protein SENTW_1325 [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 204
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 55/133 (41%), Positives = 86/133 (64%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW
Sbjct: 53 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLT 116
+LI S++II+ ++V++ + + I ++F+ LI AN IST+LECG
Sbjct: 113 TLITSILIIIAVAVVLAISSMNAAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGG 172
Query: 117 QCFDNPTFYQLLN 129
+C NP Y+LL+
Sbjct: 173 ECAANPVTYKLLS 185
>gi|16760750|ref|NP_456367.1| hypothetical protein STY2002 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29141492|ref|NP_804834.1| hypothetical protein t1014 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213163491|ref|ZP_03349201.1| hypothetical protein Salmoneentericaenterica_27100 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213424177|ref|ZP_03357042.1| hypothetical protein SentesTyphi_00330 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213581983|ref|ZP_03363809.1| hypothetical protein SentesTyph_12584 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213609962|ref|ZP_03369788.1| hypothetical protein SentesTyp_05317 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213648148|ref|ZP_03378201.1| hypothetical protein SentesTy_13194 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213857347|ref|ZP_03384318.1| hypothetical protein SentesT_19425 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289825633|ref|ZP_06544810.1| hypothetical protein Salmonellentericaenterica_09396 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|25513171|pir||AH0730 probable membrane protein STY2002 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16503047|emb|CAD05546.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137119|gb|AAO68683.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 204
Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats.
Identities = 55/133 (41%), Positives = 86/133 (64%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW
Sbjct: 53 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLT 116
+LI S++II+ ++V++ + + I ++F+ LI AN IST+LECG
Sbjct: 113 TLITSILIIIAVAVVLAISSMNAAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGG 172
Query: 117 QCFDNPTFYQLLN 129
+C NP Y+LL+
Sbjct: 173 ECAANPVTYKLLS 185
>gi|205352473|ref|YP_002226274.1| hypothetical protein SG1250 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205272254|emb|CAR37130.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326627529|gb|EGE33872.1| Putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 204
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW
Sbjct: 53 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLT 116
+LI S++II+ ++V++ + + + I ++F+ LI AN IST+LECG
Sbjct: 113 TLITSILIIIAVAVVLAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 172
Query: 117 QCFDNPTFYQLLN 129
+C NP Y+LL+
Sbjct: 173 ECAANPVTYKLLS 185
>gi|194442392|ref|YP_002041129.1| hypothetical protein SNSL254_A2020 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|205357369|ref|ZP_03223727.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|207856629|ref|YP_002243280.1| hypothetical protein SEN1172 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|194401055|gb|ACF61277.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|205322135|gb|EDZ09974.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|206708432|emb|CAR32753.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
Length = 206
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW
Sbjct: 55 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 114
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLT 116
+LI S++II+ ++V++ + + + I ++F+ LI AN IST+LECG
Sbjct: 115 TLITSILIIIAVAVVLAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 174
Query: 117 QCFDNPTFYQLLN 129
+C NP Y+LL+
Sbjct: 175 ECAANPVTYKLLS 187
>gi|118497888|ref|YP_898938.1| DsbB family disulfide bond formation protein [Francisella
tularensis subsp. novicida U112]
gi|118423794|gb|ABK90184.1| disulfide bond formation protein DsbB family [Francisella novicida
U112]
Length = 189
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREI-----------AIYLFVFLIFANFIST 109
+ S+V I++I+++M + E++ + E +F+ ++FAN +ST
Sbjct: 112 FVISMVAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187
>gi|187931777|ref|YP_001891762.1| disulfide bond formation protein DsbB family [Francisella
tularensis subsp. mediasiatica FSC147]
gi|187712686|gb|ACD30983.1| disulfide bond formation protein DsbB family [Francisella
tularensis subsp. mediasiatica FSC147]
Length = 189
Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREI-----------AIYLFVFLIFANFIST 109
+ S++ I++I+++M + E++ + E +F+ ++FAN +ST
Sbjct: 112 FVISMIAIIYIAIVMSYPRQYELRRQPQQISETKNNIIRLFIQIIFIIFLLVVFANVVST 171
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187
>gi|56708347|ref|YP_170243.1| hypothetical protein FTT_1288 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670818|ref|YP_667375.1| hypothetical protein FTF1288 [Francisella tularensis subsp.
tularensis FSC198]
gi|224457473|ref|ZP_03665946.1| hypothetical protein FtultM_07362 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254370969|ref|ZP_04986973.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254875170|ref|ZP_05247880.1| disulfide bond formation protein DsbB family [Francisella
tularensis subsp. tularensis MA00-2987]
gi|54114265|gb|AAV29766.1| NT02FT0215 [synthetic construct]
gi|56604839|emb|CAG45921.1| conserved hypothetical membrane protein [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110321151|emb|CAL09304.1| conserved hypothetical membrane protein [Francisella tularensis
subsp. tularensis FSC198]
gi|151569211|gb|EDN34865.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254841169|gb|EET19605.1| disulfide bond formation protein DsbB family [Francisella
tularensis subsp. tularensis MA00-2987]
gi|282159586|gb|ADA78977.1| hypothetical protein NE061598_07440 [Francisella tularensis subsp.
tularensis NE061598]
Length = 189
Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREI-----------AIYLFVFLIFANFIST 109
+ S++ I++I+++M + E++ + E +F+ ++FAN +ST
Sbjct: 112 FVISMIAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187
>gi|200390522|ref|ZP_03217133.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199602967|gb|EDZ01513.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 204
Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats.
Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW
Sbjct: 53 ITGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLT 116
+LI S++II+ ++V++ + + + I ++F+ LI AN IST+LECG
Sbjct: 113 TLITSILIIIAVAVVLAISSMNVAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGG 172
Query: 117 QCFDNPTFYQLLN 129
+C NP Y+LL+
Sbjct: 173 ECAANPVTYKLLS 185
>gi|56413218|ref|YP_150293.1| hypothetical protein SPA1008 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362143|ref|YP_002141780.1| hypothetical protein SSPA0940 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56127475|gb|AAV76981.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197093620|emb|CAR59089.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 204
Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats.
Identities = 55/133 (41%), Positives = 86/133 (64%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW
Sbjct: 53 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQMCLHIMPGDTGYGSAFFGLHFYTW 112
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLT 116
+LI S++II+ ++V++ + + I ++F+ LI AN IST+LECG
Sbjct: 113 TLITSILIIIAVAVVLAISSMNAAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGG 172
Query: 117 QCFDNPTFYQLLN 129
+C NP Y+LL+
Sbjct: 173 ECAANPVTYKLLS 185
>gi|198243055|ref|YP_002215275.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|197937571|gb|ACH74904.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|326623020|gb|EGE29365.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
Length = 204
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW
Sbjct: 53 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLT 116
+LI S++II+ ++V++ + + + I ++F+ LI AN IST+LECG
Sbjct: 113 TLITSILIIIAVAVVLAISSMNVAFRSLNINPVLFSIVGWVFLLLITANLISTVLECGGG 172
Query: 117 QCFDNPTFYQLLN 129
+C NP Y+LL+
Sbjct: 173 ECAANPVTYKLLS 185
>gi|170701333|ref|ZP_02892296.1| putative transmembrane protein [Burkholderia ambifaria IOP40-10]
gi|170133749|gb|EDT02114.1| putative transmembrane protein [Burkholderia ambifaria IOP40-10]
Length = 201
Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 13/141 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
G+G NL G++ HY+I++ GA+ +I+ RQ L+HI+PG Y + GMH+Y +
Sbjct: 58 AGMGLALNLRFGMRPSHYAIILFGALLGGVISARQSLLHIVPGSGAYGREILGMHMYVAA 117
Query: 62 LIFSLVIILFISVLMLFD-------TAEIKVAKSPVRE------IAIYLFVFLIFANFIS 108
+ + I++ ++ ++LFD +E + P R +A+ LF L N +S
Sbjct: 118 FVGFVAIVVAVACMLLFDCQFLQRADSEAPAEQQPPRSLGGVSMVAVALFAVLTLGNAVS 177
Query: 109 TILECGLTQCFDNPTFYQLLN 129
T LECG C NP Y LL
Sbjct: 178 TALECGAGLCVANPVSYLLLG 198
>gi|145589498|ref|YP_001156095.1| hypothetical protein Pnuc_1317 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047904|gb|ABP34531.1| conserved hypothetical protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 187
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+IG + N+ G HY ILG + ++ RQV +HILPGD G+ +H YTW
Sbjct: 52 IIGFALVLNIRCGAHSAHYGWAILGGLVGMTVSLRQVFLHILPGDKGFGATFLELHFYTW 111
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFD 120
+ + + ++ ++L++ E++ +++ + +F+ L+F N +ST+LECG C D
Sbjct: 112 AFVGYMGLLAGQAILLMLPNREVR-SRTWFANALVIIFILLVFGNLLSTLLECGFGPCAD 170
Query: 121 NPTFYQ 126
+P Y
Sbjct: 171 DPVKYD 176
>gi|17548420|ref|NP_521760.1| hypothetical protein RS04712 [Ralstonia solanacearum GMI1000]
gi|17430667|emb|CAD17350.1| probable transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 184
Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats.
Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 7/135 (5%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
G+G NL G + HY++MIL ++ IA RQ+L+HI+PG Y ++G+HLYT +
Sbjct: 49 AGVGLALNLRFGARPAHYALMILASLAGAAIAGRQILLHIVPGTGTYGEALWGLHLYTLA 108
Query: 62 LIFSLVIILFISVLMLFDTA----EIKVAKSPVRE---IAIYLFVFLIFANFISTILECG 114
I V+I ++L+L + + E ++P+ A+ L L N + T LECG
Sbjct: 109 FIAFAVMIAGTAILLLLERSPEADEGPAKRAPMSRAALAAVALLTVLTLGNVLGTFLECG 168
Query: 115 LTQCFDNPTFYQLLN 129
C D+P Y LL
Sbjct: 169 GGMCADDPVIYDLLG 183
>gi|83747350|ref|ZP_00944390.1| Disulfide bond formation protein B [Ralstonia solanacearum UW551]
gi|83725937|gb|EAP73075.1| Disulfide bond formation protein B [Ralstonia solanacearum UW551]
Length = 188
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+G NL G + HY++MIL ++ +IA RQVL+HI+PG Y ++G+HLYT +
Sbjct: 49 VGVGLALNLRFGARPAHYALMILASLGGAVIAGRQVLLHIVPGTGTYGEALWGLHLYTLA 108
Query: 62 LIFSLVIILFISVLMLFDTAE-----------IKVAKSPVREIAIYLFVFLIFANFISTI 110
I VII +V++ + S A+ L L N + T
Sbjct: 109 FIAFSVIIAGTAVMLFLERLPEADEGTARLPREPSLTSRAALAAVALLTVLTLGNVVGTF 168
Query: 111 LECGLTQCFDNPTFYQLLN 129
LECG C D+P Y+LL
Sbjct: 169 LECGAGMCADDPVVYELLG 187
>gi|299068597|emb|CBJ39827.1| conserved membrane protein of unknown function [Ralstonia
solanacearum CMR15]
Length = 168
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
G+G NL G + HY++MIL ++ IA RQ+L+HI+PG Y ++G+HLYT +
Sbjct: 33 AGVGLALNLRFGARPAHYALMILASLAGAAIAGRQILLHIVPGTGTYGEALWGLHLYTLA 92
Query: 62 LIFSLVIILFISVLMLF----DTAEIKVAKSPVRE---IAIYLFVFLIFANFISTILECG 114
I + +I +VL+L D E +P+ A+ L L N + T LECG
Sbjct: 93 FIAFMAMIAGTAVLLLLERLPDADEGLAKPAPMSRAALAAVALLTVLTLGNVLGTFLECG 152
Query: 115 LTQCFDNPTFYQLLN 129
C D+P Y LL
Sbjct: 153 GGMCADDPVIYDLLG 167
>gi|207739629|ref|YP_002258022.1| hypothetical protein RSIPO_04330 [Ralstonia solanacearum IPO1609]
gi|206593009|emb|CAQ59915.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 172
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+G NL G + HY++MIL ++ +IA RQVL+HI+PG Y ++G+HLYT +
Sbjct: 33 VGVGLALNLRFGARPAHYALMILASLGGAVIAGRQVLLHIVPGTGTYGEALWGLHLYTLA 92
Query: 62 LIFSLVIILFISVLMLFDTAE-----------IKVAKSPVREIAIYLFVFLIFANFISTI 110
I VII +V++ + S A+ L L N + T
Sbjct: 93 FIAFSVIIAGTAVMLFLERLPEADEGTARLPREPSLTSRAALAAVALLTVLTLGNVVGTF 152
Query: 111 LECGLTQCFDNPTFYQLLN 129
LECG C D+P Y+LL
Sbjct: 153 LECGAGMCADDPVVYELLG 171
>gi|16765205|ref|NP_460820.1| inner membrane protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167993831|ref|ZP_02574924.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168462619|ref|ZP_02696550.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|194451478|ref|YP_002045916.1| hypothetical protein SeHA_C2074 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197261831|ref|ZP_03161905.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|204931001|ref|ZP_03221827.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|16420398|gb|AAL20779.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|194409782|gb|ACF70001.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|195634091|gb|EDX52443.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197240086|gb|EDY22706.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|204320045|gb|EDZ05250.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205328218|gb|EDZ14982.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|267993834|gb|ACY88719.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301158386|emb|CBW17889.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912858|dbj|BAJ36832.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321224505|gb|EFX49568.1| Putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322616860|gb|EFY13768.1| hypothetical protein SEEM315_15824 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618099|gb|EFY14991.1| hypothetical protein SEEM971_05198 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625770|gb|EFY22589.1| hypothetical protein SEEM973_08997 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626220|gb|EFY23030.1| hypothetical protein SEEM974_05795 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633826|gb|EFY30566.1| hypothetical protein SEEM201_02204 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322638980|gb|EFY35673.1| hypothetical protein SEEM202_10198 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322640518|gb|EFY37170.1| hypothetical protein SEEM954_02430 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644185|gb|EFY40730.1| hypothetical protein SEEM054_02737 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648391|gb|EFY44845.1| hypothetical protein SEEM675_10827 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322655415|gb|EFY51723.1| hypothetical protein SEEM965_14118 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322660829|gb|EFY57060.1| hypothetical protein SEEM19N_10393 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662875|gb|EFY59082.1| hypothetical protein SEEM801_18882 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322668059|gb|EFY64218.1| hypothetical protein SEEM507_21346 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674179|gb|EFY70273.1| hypothetical protein SEEM877_13623 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675466|gb|EFY71540.1| hypothetical protein SEEM867_03512 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322683119|gb|EFY79135.1| hypothetical protein SEEM180_11192 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686813|gb|EFY82791.1| hypothetical protein SEEM600_19185 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323130142|gb|ADX17572.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323195295|gb|EFZ80475.1| hypothetical protein SEEM581_08834 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199188|gb|EFZ84283.1| hypothetical protein SEEM501_00410 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202999|gb|EFZ88032.1| hypothetical protein SEEM460_02801 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323207444|gb|EFZ92392.1| hypothetical protein SEEM020_07033 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323209933|gb|EFZ94845.1| hypothetical protein SEEM6152_06518 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217427|gb|EGA02146.1| hypothetical protein SEEM0077_21182 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323224646|gb|EGA08919.1| hypothetical protein SEEM0055_00781 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323231449|gb|EGA15562.1| hypothetical protein SEEM0052_14546 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323235890|gb|EGA19969.1| hypothetical protein SEEM3312_13514 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240459|gb|EGA24502.1| hypothetical protein SEEM5258_10806 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323245352|gb|EGA29352.1| hypothetical protein SEEM1156_16456 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246718|gb|EGA30690.1| hypothetical protein SEEM9199_07591 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323253573|gb|EGA37401.1| hypothetical protein SEEM8282_15368 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257720|gb|EGA41403.1| hypothetical protein SEEM8283_00622 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260383|gb|EGA43999.1| hypothetical protein SEEM8284_20548 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266825|gb|EGA50311.1| hypothetical protein SEEM8285_18889 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269031|gb|EGA52487.1| hypothetical protein SEEM8287_03672 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|332988754|gb|AEF07737.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 204
Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats.
Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW
Sbjct: 53 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLT 116
+LI S++II+ ++V++ + + + I ++F+ LI AN IST+LECG
Sbjct: 113 TLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 172
Query: 117 QCFDNPTFYQLLN 129
+C NP Y+LL+
Sbjct: 173 ECAANPVTYKLLS 185
>gi|205358999|ref|ZP_03224187.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205339493|gb|EDZ26257.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
Length = 206
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW
Sbjct: 55 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 114
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLT 116
+LI S++II+ ++V++ + + + I ++F+ LI AN IST+LECG
Sbjct: 115 TLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 174
Query: 117 QCFDNPTFYQLLN 129
+C NP Y+LL+
Sbjct: 175 ECAANPVTYKLLS 187
>gi|194738032|ref|YP_002114899.1| hypothetical protein SeSA_A2012 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197301067|ref|ZP_03166277.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194713534|gb|ACF92755.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197288641|gb|EDY28016.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
Length = 206
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW
Sbjct: 55 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 114
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLT 116
+LI S++II+ ++V++ + + + I ++F+ LI AN IST+LECG
Sbjct: 115 TLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 174
Query: 117 QCFDNPTFYQLLN 129
+C NP Y+LL+
Sbjct: 175 ECAANPVTYKLLS 187
>gi|168259875|ref|ZP_02681848.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|205350713|gb|EDZ37344.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
Length = 204
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW
Sbjct: 53 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLT 116
+LI S++II+ ++V++ + + + I ++F+ LI AN IST+LECG
Sbjct: 113 TLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 172
Query: 117 QCFDNPTFYQLLN 129
+C NP Y+LL+
Sbjct: 173 ECAANPVTYKLLS 185
>gi|62180435|ref|YP_216852.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|224583639|ref|YP_002637437.1| hypothetical protein SPC_1858 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|62128068|gb|AAX65771.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|224468166|gb|ACN45996.1| hypothetical protein SPC_1858 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322714908|gb|EFZ06479.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 204
Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats.
Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFLFNL G++ HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW
Sbjct: 53 IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQMCLHIMPGDTGYGSTFFGLHFYTW 112
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLT 116
+LI S++II+ ++V++ + + + I ++F+ LI AN IST+LECG
Sbjct: 113 TLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 172
Query: 117 QCFDNPTFYQLLN 129
+C NP Y+LL+
Sbjct: 173 ECAANPVTYKLLS 185
>gi|241668173|ref|ZP_04755751.1| hypothetical protein FphipA2_05361 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876708|ref|ZP_05249418.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842729|gb|EET21143.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 190
Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 13/138 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T I+ RQ+ +H+ +G+ VFG+H+YTW
Sbjct: 53 IGFGFLLNMHYHIRPSHYALSLLAAVLTSFISLRQIALHVS-DPVGFGSTVFGLHMYTWV 111
Query: 62 LIFSLVIILFISVLMLFDTAE---------IKVAKSPVREIA---IYLFVFLIFANFIST 109
+ ++ I++IS++M + + +R+++ +F+ IF N ST
Sbjct: 112 FVICMIAIIYISIVMSYPNQYKINKDANEIADAKNNKIRKLSHIVFVIFIIAIFTNIAST 171
Query: 110 ILECGLTQCFDNPTFYQL 127
+ECG+ +C DNPT Y L
Sbjct: 172 FIECGIHECPDNPTKYIL 189
>gi|52840653|ref|YP_094452.1| inner (transmembrane) protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52627764|gb|AAU26505.1| inner (transmembrane) protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 182
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 81/130 (62%), Gaps = 2/130 (1%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+ F+ NL+ GI+ HY +M+L + I+ RQ+ IH+ PGD GY +FG+HLYTWS
Sbjct: 51 VGLCFVMNLMLGIRASHYGLMLLATLLGLSISVRQMYIHLTPGDPGYGGLIFGLHLYTWS 110
Query: 62 LIFSLVIILFISVLMLFDTA--EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCF 119
I LVIIL I+ ++ D +S ++ I++F LI AN IST LECG +C
Sbjct: 111 AIIFLVIILLIAGALILDKGFMPDYKVRSKSAKVMIWVFFILILANGISTFLECGPHECP 170
Query: 120 DNPTFYQLLN 129
DNP+ Y LLN
Sbjct: 171 DNPSKYYLLN 180
>gi|300696744|ref|YP_003747405.1| hypothetical protein RCFBP_mp10194 [Ralstonia solanacearum
CFBP2957]
gi|299073468|emb|CBJ52984.1| conserved membrane protein of unknown function [Ralstonia
solanacearum CFBP2957]
Length = 188
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+G NL G + HY++MIL ++ +IA RQVL+HI+PG Y ++G+HLYT +
Sbjct: 49 VGVGLALNLCFGARPAHYALMILASLGGAVIAGRQVLLHIVPGTGTYGEALWGLHLYTLA 108
Query: 62 LIFSLVIILFISVLMLFDTAEI-----------KVAKSPVREIAIYLFVFLIFANFISTI 110
I VII +V++ + S A+ L L N + T
Sbjct: 109 FIAFSVIIAGTAVMLFLERLPDADEGTAGVPREPSLTSRAALAAVALLTVLTLGNVVGTF 168
Query: 111 LECGLTQCFDNPTFYQLLN 129
LECG C D+P Y LL
Sbjct: 169 LECGTGMCADDPVIYDLLG 187
>gi|167627604|ref|YP_001678104.1| hypothetical protein Fphi_1378 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597605|gb|ABZ87603.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 146
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 13/138 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG FL N+ ++ HY++ +L A+ T I+ RQ+ +H+ +G+ VFG+H+YTW
Sbjct: 9 IGFEFLLNIRYSVRPSHYALSLLAAVLTSFISLRQIALHVS-DPVGFGSTVFGLHMYTWV 67
Query: 62 LIFSLVIILFISVLMLFDTAEI------------KVAKSPVREIAIYLFVFLIFANFIST 109
+ ++ I++IS++M + + I +F+ IF N ST
Sbjct: 68 FVICMIAIIYISIVMSYPNQYKINKDANEIADAKNNKIRTLSHIVFVIFIIAIFTNIAST 127
Query: 110 ILECGLTQCFDNPTFYQL 127
+ECG+ +C DNPT Y L
Sbjct: 128 FIECGIHECPDNPTKYIL 145
>gi|51246282|ref|YP_066166.1| hypothetical protein DP2430 [Desulfotalea psychrophila LSv54]
gi|50877319|emb|CAG37159.1| hypothetical membrane protein [Desulfotalea psychrophila LSv54]
Length = 195
Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 4 IGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLI 63
IG + NL G++ HY I+++ A+ + RQ+L+HI+PG Y P++G H+YTW+ I
Sbjct: 66 IGAVLNLNFGMRTSHYGIILISALFGMAGSVRQILLHIVPGTGNYGAPIWGYHMYTWAGI 125
Query: 64 FSLVIILFISVLMLFDTA-EIKVAKSPVREIAIYLFVFLIFANF---ISTILECGLTQCF 119
++F ++++L + + + + Y+ +F I + + T ECGL QC
Sbjct: 126 AFFCSLVFSAIMLLQERTITLGMIVQQRDKATRYITIFAITLSLTLVVLTFAECGLGQCP 185
Query: 120 DNPTFYQLLN 129
DNPT Y L
Sbjct: 186 DNPTRYWLFE 195
>gi|54293401|ref|YP_125816.1| hypothetical protein lpl0450 [Legionella pneumophila str. Lens]
gi|53753233|emb|CAH14680.1| hypothetical protein lpl0450 [Legionella pneumophila str. Lens]
gi|307609216|emb|CBW98680.1| hypothetical protein LPW_04891 [Legionella pneumophila 130b]
Length = 182
Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+ F+ NL+ GI+ HY +M+L ++ I+ RQ+ IH+ PGD GY G+HLYTWS
Sbjct: 51 VGLCFVMNLMLGIRASHYGLMLLASLLGLSISVRQMYIHLTPGDPGYGGLFLGLHLYTWS 110
Query: 62 LIFSLVIILFISVLMLFDTA--EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCF 119
I LVIIL I+ ++ D +S ++ I++F LI AN IST LECG +C
Sbjct: 111 AIIFLVIILLIAGALILDKGLMPDYKVRSKSAKVMIWVFFILILANGISTFLECGPHECP 170
Query: 120 DNPTFYQLLN 129
DNP+ Y LLN
Sbjct: 171 DNPSKYYLLN 180
>gi|54296443|ref|YP_122812.1| hypothetical protein lpp0474 [Legionella pneumophila str. Paris]
gi|53750228|emb|CAH11622.1| hypothetical protein lpp0474 [Legionella pneumophila str. Paris]
Length = 182
Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+ F+ NL+ GI+ HY +M+L ++ I+ RQ+ IH+ PGD GY G+HLYTWS
Sbjct: 51 VGLCFVMNLMLGIRASHYGLMLLASLLGLSISVRQMYIHLTPGDPGYGGLFLGLHLYTWS 110
Query: 62 LIFSLVIILFISVLMLFDTA--EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCF 119
I LVIIL I+ ++ D +S ++ I++F LI AN IST LECG +C
Sbjct: 111 AIIFLVIILLIAGALILDKGLMPDYKVRSKSAKVMIWVFFILILANGISTFLECGPHECP 170
Query: 120 DNPTFYQLLN 129
DNP+ Y LLN
Sbjct: 171 DNPSKYYLLN 180
>gi|148360976|ref|YP_001252183.1| transmembrane protein [Legionella pneumophila str. Corby]
gi|296105958|ref|YP_003617658.1| inner (transmembrane) protein [Legionella pneumophila 2300/99
Alcoy]
gi|148282749|gb|ABQ56837.1| inner (transmembrane) protein [Legionella pneumophila str. Corby]
gi|295647859|gb|ADG23706.1| inner (transmembrane) protein [Legionella pneumophila 2300/99
Alcoy]
Length = 182
Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+ F+ NL+ GI+ HY +M+L ++ I+ RQ+ IH+ PGD GY G+HLYTWS
Sbjct: 51 VGLCFVMNLMLGIRASHYGLMLLASLLGLSISVRQMYIHLTPGDPGYGGLFLGLHLYTWS 110
Query: 62 LIFSLVIILFISVLMLFDTA--EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCF 119
I LVIIL I+ ++ D +S ++ I++F LI AN IST LECG +C
Sbjct: 111 AIIFLVIILLIAGALILDKGFMPDYKVRSKSAKVMIWVFFILILANGISTFLECGPHECP 170
Query: 120 DNPTFYQLLN 129
DNP+ Y LLN
Sbjct: 171 DNPSKYYLLN 180
>gi|49474632|ref|YP_032674.1| hypothetical protein BQ11240 [Bartonella quintana str. Toulouse]
gi|49240136|emb|CAF26585.1| hypothetical protein BQ11240 [Bartonella quintana str. Toulouse]
Length = 196
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 48/133 (36%), Positives = 78/133 (58%), Gaps = 4/133 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G GFLFN+ +++ HY ++ILG + CI A RQ+ + I GDLG +FG+HLY W
Sbjct: 57 IAGCGFLFNIHLRVRKIHYGMVILGCMVICISAARQIFLQITLGDLGDGPTLFGLHLYIW 116
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK----SPVREIAIYLFVFLIFANFISTILECGLT 116
+ I + + + ++ +M+ K + +A +LFVFLI AN ++ ILECG
Sbjct: 117 AFIIAGLCLFAVAFIMILSEWTRKFKVFSPFPRLGGMASFLFVFLIAANLLTAILECGSG 176
Query: 117 QCFDNPTFYQLLN 129
C ++P Y++L+
Sbjct: 177 LCTNDPVKYEVLS 189
>gi|207722325|ref|YP_002252761.1| hypothetical protein RSMK04922 [Ralstonia solanacearum MolK2]
gi|206587502|emb|CAQ18084.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 174
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+G+G NL G + HY++MIL ++ +IA RQVL+HI+P G Y ++G+HLYT
Sbjct: 33 VGVGLALNLRFGARPAHYALMILASLGGAVIAGRQVLLHIVPGTGTGTYGEALWGLHLYT 92
Query: 60 WSLIFSLVIILFISVLMLFDTAE-----------IKVAKSPVREIAIYLFVFLIFANFIS 108
+ I VII +V++ + S A+ L L N +
Sbjct: 93 LAFIAFSVIIAGTAVMLFLERLPEADEGTARLPREPSLTSRAALAAVALLTVLTLGNVVG 152
Query: 109 TILECGLTQCFDNPTFYQLLN 129
T LECG C D+P Y+LL
Sbjct: 153 TFLECGAGMCADDPGAYELLG 173
>gi|167627537|ref|YP_001678037.1| DsbB family disulfide bond formation protein [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|167597538|gb|ABZ87536.1| disulfide bond formation protein, DsbB family [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 178
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
G K ++Y + L AI +A Q+L+HI+PG Y VF +H+YTW+ I S++ I++
Sbjct: 59 HGNKYKNYLFVTLVAILNAAMAMTQILLHIVPGTGNYGDAVFSLHMYTWNFIVSIIFIIY 118
Query: 72 ISVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++ F E K S ++AI+L + L AN IS +ECG C +P Y LLN
Sbjct: 119 ATICGFFTLNEDKKKNLSLFAKVAIFLILALTLANTISVFIECGPHLCPSDPDSYWLLN 177
>gi|241668105|ref|ZP_04755683.1| DsbB family disulfide bond formation protein [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254876640|ref|ZP_05249350.1| disulfide bond formation protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842661|gb|EET21075.1| disulfide bond formation protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 178
Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
G K ++Y + L AI +A Q+L+HI+PG Y VF +H+YTW+ I S++ I++
Sbjct: 59 HGNKYKNYLFVTLVAILNAAMAMTQILLHIVPGTGNYGDAVFSLHMYTWNFIVSIIFIIY 118
Query: 72 ISVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++ F E K + +IAI+L + L AN I+ +ECG C +P Y LLN
Sbjct: 119 ATICGFFTPNEDKKKNLNLFTKIAIFLILALTLANTINVFVECGPHLCPSDPDSYWLLN 177
>gi|156502603|ref|YP_001428668.1| hypothetical protein FTA_1237 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|156253206|gb|ABU61712.1| hypothetical membrane protein [Francisella tularensis subsp.
holarctica FTNF002-00]
Length = 194
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T I+ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 58 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFISLRQIALHVT-DPVGFGSKVLGMHMYSWV 116
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREI-----------AIYLFVFLIFANFIST 109
+ S++ I++I++++ + E++ + E +F+ ++FAN +ST
Sbjct: 117 FVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 176
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 177 FFECGLHECPDDPTRY 192
>gi|160872578|ref|ZP_02062710.1| disulfide bond formation protein DsbB family [Rickettsiella grylli]
gi|159121377|gb|EDP46715.1| disulfide bond formation protein DsbB family [Rickettsiella grylli]
Length = 234
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 6/132 (4%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
I GFL N+ I+ HY++ +L A+ T I+TRQ+ +H+ PGD GY +P+FG+HLYTW
Sbjct: 93 IAFGFLLNVQFKIRPVHYALSLLSAMLTAAISTRQIFLHVAPGDQGYGLPLFGLHLYTWV 152
Query: 62 LIFSLVIILFISVLML------FDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGL 115
I + II++IS++ ++ ++ L N I+T LECG+
Sbjct: 153 FILCVAIIIYISIIFSIFPQYQYEEPPKTKTMKLLKHATFAAVFVLAIFNGIATYLECGI 212
Query: 116 TQCFDNPTFYQL 127
C +NP Y++
Sbjct: 213 KVCPENPVHYEI 224
>gi|89256495|ref|YP_513857.1| hypothetical protein FTL_1173 [Francisella tularensis subsp.
holarctica LVS]
gi|115314925|ref|YP_763648.1| hypothetical protein FTH_1146 [Francisella tularensis subsp.
holarctica OSU18]
gi|167011114|ref|ZP_02276045.1| hypothetical protein Ftulh_10473 [Francisella tularensis subsp.
holarctica FSC200]
gi|254367827|ref|ZP_04983847.1| hypothetical protein FTHG_01111 [Francisella tularensis subsp.
holarctica 257]
gi|89144326|emb|CAJ79612.1| conserved hypothetical membrane protein [Francisella tularensis
subsp. holarctica LVS]
gi|115129824|gb|ABI83011.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica OSU18]
gi|134253637|gb|EBA52731.1| hypothetical protein FTHG_01111 [Francisella tularensis subsp.
holarctica 257]
Length = 189
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREI-----------AIYLFVFLIFANFIST 109
+ S++ I++I++++ + E++ + E +F+ ++FAN +ST
Sbjct: 112 FVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187
>gi|290953960|ref|ZP_06558581.1| hypothetical protein FtulhU_06713 [Francisella tularensis subsp.
holarctica URFT1]
gi|295312637|ref|ZP_06803387.1| hypothetical protein FtulhU_06705 [Francisella tularensis subsp.
holarctica URFT1]
Length = 189
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T I+ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFISLRQIALHVT-DPVGFGSKVLGMHMYSWV 111
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREI-----------AIYLFVFLIFANFIST 109
+ S++ I++I++++ + E++ + E +F+ ++FAN +ST
Sbjct: 112 FVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187
>gi|254369614|ref|ZP_04985625.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|157122568|gb|EDO66703.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
Length = 189
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
IG GFL N+ I+ HY++ +L A+ T ++ RQ+ +H+ +G+ V GMH+Y+W
Sbjct: 53 IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111
Query: 62 LIFSLVIILFISVLMLFDTA-EIKVAKSPVREI-----------AIYLFVFLIFANFIST 109
+ S++ I++I++++ + E++ + E +F+ ++FAN +ST
Sbjct: 112 FVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171
Query: 110 ILECGLTQCFDNPTFY 125
ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187
>gi|62257904|gb|AAX77752.1| unknown protein [synthetic construct]
Length = 216
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+
Sbjct: 88 HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 147
Query: 72 ISVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++ L E K K S + ++AI L + L AN ++ +ECG C +P Y L N
Sbjct: 148 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 206
>gi|213420991|ref|ZP_03354057.1| hypothetical protein Salmonentericaenterica_25887 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 136
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 47/116 (40%), Positives = 75/116 (64%), Gaps = 4/116 (3%)
Query: 18 HYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLML 77
HY ++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW+LI S++II+ ++V++
Sbjct: 2 HYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLA 61
Query: 78 FDTAEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
+ + I ++F+ LI AN IST+LECG +C NP Y+LL+
Sbjct: 62 ISSMNAAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLS 117
>gi|118497951|ref|YP_899001.1| DsbB family disulfide bond formation protein [Francisella
tularensis subsp. novicida U112]
gi|134301548|ref|YP_001121516.1| hypothetical protein FTW_0477 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|187931395|ref|YP_001891379.1| disulfide bond formation protein, DsbB family [Francisella
tularensis subsp. mediasiatica FSC147]
gi|194323173|ref|ZP_03056957.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida FTE]
gi|208779641|ref|ZP_03246986.1| conserved hypothetical protein [Francisella novicida FTG]
gi|224457609|ref|ZP_03666082.1| hypothetical protein FtultM_08199 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254373304|ref|ZP_04988792.1| disulfide bond formation protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|254374767|ref|ZP_04990248.1| disulfide bond formation protein [Francisella novicida GA99-3548]
gi|46254985|gb|AAP97855.2| 20 kDa putative exported protein [Francisella tularensis]
gi|118423857|gb|ABK90247.1| disulfide bond formation protein, DsbB family [Francisella novicida
U112]
gi|134049325|gb|ABO46396.1| putative disulfide bond formation protein [Francisella tularensis
subsp. tularensis WY96-3418]
gi|151571030|gb|EDN36684.1| disulfide bond formation protein [Francisella novicida GA99-3549]
gi|151572486|gb|EDN38140.1| disulfide bond formation protein [Francisella novicida GA99-3548]
gi|187712304|gb|ACD30601.1| disulfide bond formation protein, DsbB family [Francisella
tularensis subsp. mediasiatica FSC147]
gi|194322537|gb|EDX20017.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida FTE]
gi|208744602|gb|EDZ90901.1| conserved hypothetical protein [Francisella novicida FTG]
gi|282159653|gb|ADA79044.1| hypothetical protein NE061598_07835 [Francisella tularensis subsp.
tularensis NE061598]
Length = 178
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+
Sbjct: 59 HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 118
Query: 72 ISVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++ L E K K S + ++AI L + L AN ++ +ECG C +P Y L N
Sbjct: 119 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 177
>gi|56708458|ref|YP_170354.1| hypothetical protein FTT_1410 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670929|ref|YP_667486.1| hypothetical protein FTF1410 [Francisella tularensis subsp.
tularensis FSC198]
gi|254371082|ref|ZP_04987084.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254875302|ref|ZP_05248012.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|56604950|emb|CAG46043.1| conserved hypothetical membrane protein [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110321262|emb|CAL09426.1| conserved hypothetical membrane protein [Francisella tularensis
subsp. tularensis FSC198]
gi|151569322|gb|EDN34976.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254841301|gb|EET19737.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
Length = 181
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+
Sbjct: 62 HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 121
Query: 72 ISVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++ L E K K S + ++AI L + L AN ++ +ECG C +P Y L N
Sbjct: 122 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 180
>gi|89256043|ref|YP_513405.1| hypothetical protein FTL_0652 [Francisella tularensis subsp.
holarctica LVS]
gi|156502055|ref|YP_001428120.1| hypothetical protein FTA_0688 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167010201|ref|ZP_02275132.1| hypothetical protein Ftulh_05650 [Francisella tularensis subsp.
holarctica FSC200]
gi|254367383|ref|ZP_04983409.1| hypothetical protein FTHG_00611 [Francisella tularensis subsp.
holarctica 257]
gi|290954244|ref|ZP_06558865.1| hypothetical protein FtulhU_08389 [Francisella tularensis subsp.
holarctica URFT1]
gi|295312364|ref|ZP_06803149.1| hypothetical protein FtulhU_08376 [Francisella tularensis subsp.
holarctica URFT1]
gi|89143874|emb|CAJ79092.1| conserved hypothetical membrane protein [Francisella tularensis
subsp. holarctica LVS]
gi|134253199|gb|EBA52293.1| hypothetical protein FTHG_00611 [Francisella tularensis subsp.
holarctica 257]
gi|156252658|gb|ABU61164.1| putative disulfide bond formation protein [Francisella tularensis
subsp. holarctica FTNF002-00]
Length = 178
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+
Sbjct: 59 HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 118
Query: 72 ISVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++ L E K K S + ++AI L + L AN ++ +ECG C +P Y L N
Sbjct: 119 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 177
>gi|254368867|ref|ZP_04984880.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|157121788|gb|EDO65958.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
Length = 181
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+
Sbjct: 62 HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 121
Query: 72 ISVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++ L E K K S + ++AI L + L AN ++ +ECG C +P Y L N
Sbjct: 122 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 180
>gi|313836796|gb|EFS74510.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2]
gi|314929796|gb|EFS93627.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1]
gi|314972225|gb|EFT16322.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3]
Length = 218
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
Y + IL AI + R +L+HI PGD GY G+ YTW+ I +++I F V+M F
Sbjct: 100 YGVSILSAILGGAESARHILLHIQPGDPGYGSKALGLSTYTWAFITFVIVIAFCGVMMTF 159
Query: 79 DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT-QCFDNPTFYQLLN 129
V + + ++LF ++ AN + + G +P Y+L+
Sbjct: 160 APWLTPRGVKTHALSAVIMWLFALIVVANLVMIVFLEGFHVLLPGDPACYELVQ 213
>gi|282854664|ref|ZP_06263999.1| conserved hypothetical protein [Propionibacterium acnes J139]
gi|282582246|gb|EFB87628.1| conserved hypothetical protein [Propionibacterium acnes J139]
gi|314923761|gb|EFS87592.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1]
gi|314966225|gb|EFT10324.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2]
gi|314981991|gb|EFT26084.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3]
gi|315090902|gb|EFT62878.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4]
gi|315095115|gb|EFT67091.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1]
gi|315104344|gb|EFT76320.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2]
gi|327328107|gb|EGE69876.1| hypothetical protein HMPREF9341_01159 [Propionibacterium acnes
HL103PA1]
Length = 216
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
Y + IL A+ + R +L+HI PGD GY FG+ YTW+ I ++I F V+M F
Sbjct: 98 YGVSILSAVLGAAESARHILLHIQPGDPGYGSKAFGLSTYTWAFITFTIVIAFCGVMMTF 157
Query: 79 DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT-QCFDNPTFYQLLN 129
V + + ++LF ++ AN + + G +P Y+L+
Sbjct: 158 APWLTPRDVKAHAISTVIMWLFALIVVANLVMIVFLEGFHFLLPGDPACYELVQ 211
>gi|149178805|ref|ZP_01857386.1| hypothetical protein PM8797T_06467 [Planctomyces maris DSM 8797]
gi|148842346|gb|EDL56728.1| hypothetical protein PM8797T_06467 [Planctomyces maris DSM 8797]
Length = 196
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
Y + IL A+ I+TRQ+LIHI+P D GY PV G+HLYTW+L+ LV+++ + ++F
Sbjct: 74 YGMSILAAVCGACISTRQILIHIVPPDPGYGDPVLGLHLYTWALVVFLVVLIDSGLNLMF 133
Query: 79 DT---AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ-CFDNPTFYQLL 128
+ + + V + I + +I AN +S + G D+P Y+L
Sbjct: 134 VPELVTDHPIEFNWVSKAVIGILGAVIIANLLSVFCQEGFHWVLPDDPVRYELF 187
>gi|332678668|gb|AEE87797.1| Putative inner membrane protein [Francisella cf. novicida Fx1]
Length = 178
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+
Sbjct: 59 HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 118
Query: 72 ISVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++ L E K K S + ++AI L + L AN ++ +ECG C +P Y L N
Sbjct: 119 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCLSDPNSYWLFN 177
>gi|315100321|gb|EFT72297.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1]
Length = 216
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
Y + IL A+ + R +L+HI PGD GY FG+ YTW+ I ++I F V+M F
Sbjct: 98 YGVSILSAVLGAAESARHILLHIQPGDPGYGSKTFGLSTYTWAFITFTIVIAFCGVMMTF 157
Query: 79 DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT-QCFDNPTFYQLLN 129
V + + ++LF ++ AN + + GL +P Y+L+
Sbjct: 158 APWLTPRGVKAHAISTVIMWLFALIVVANLVMIVFLEGLHFLLPGDPACYELVQ 211
>gi|50842993|ref|YP_056220.1| hypothetical protein PPA1515 [Propionibacterium acnes KPA171202]
gi|289426393|ref|ZP_06428136.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|289428753|ref|ZP_06430436.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|50840595|gb|AAT83262.1| conserved membrane protein [Propionibacterium acnes KPA171202]
gi|289153121|gb|EFD01839.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|289158151|gb|EFD06371.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|313763569|gb|EFS34933.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1]
gi|313773508|gb|EFS39474.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1]
gi|313793962|gb|EFS41986.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1]
gi|313801349|gb|EFS42600.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2]
gi|313807971|gb|EFS46452.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2]
gi|313811560|gb|EFS49274.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1]
gi|313813382|gb|EFS51096.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1]
gi|313816749|gb|EFS54463.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1]
gi|313819540|gb|EFS57254.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2]
gi|313822137|gb|EFS59851.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1]
gi|313823629|gb|EFS61343.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
gi|313825953|gb|EFS63667.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1]
gi|313829420|gb|EFS67134.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2]
gi|313831300|gb|EFS69014.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1]
gi|313834911|gb|EFS72625.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1]
gi|313839930|gb|EFS77644.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1]
gi|314914723|gb|EFS78554.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4]
gi|314919315|gb|EFS83146.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1]
gi|314920775|gb|EFS84606.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3]
gi|314924722|gb|EFS88553.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3]
gi|314930454|gb|EFS94285.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1]
gi|314954389|gb|EFS98795.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1]
gi|314957478|gb|EFT01581.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1]
gi|314962107|gb|EFT06208.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2]
gi|314963686|gb|EFT07786.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1]
gi|314968486|gb|EFT12584.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1]
gi|314974176|gb|EFT18272.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1]
gi|314976534|gb|EFT20629.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1]
gi|314978903|gb|EFT22997.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2]
gi|314984353|gb|EFT28445.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1]
gi|314986543|gb|EFT30635.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2]
gi|314990902|gb|EFT34993.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3]
gi|315079536|gb|EFT51529.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2]
gi|315081236|gb|EFT53212.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1]
gi|315083602|gb|EFT55578.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2]
gi|315087119|gb|EFT59095.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3]
gi|315089292|gb|EFT61268.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1]
gi|315095315|gb|EFT67291.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1]
gi|315099196|gb|EFT71172.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2]
gi|315106753|gb|EFT78729.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1]
gi|315108995|gb|EFT80971.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2]
gi|327328422|gb|EGE70184.1| hypothetical protein HMPREF9338_01439 [Propionibacterium acnes
HL096PA2]
gi|327329712|gb|EGE71468.1| hypothetical protein HMPREF9337_01776 [Propionibacterium acnes
HL096PA3]
gi|327334228|gb|EGE75942.1| hypothetical protein HMPREF9344_01129 [Propionibacterium acnes
HL097PA1]
gi|327444209|gb|EGE90863.1| hypothetical protein HMPREF9571_02340 [Propionibacterium acnes
HL043PA2]
gi|327444912|gb|EGE91566.1| hypothetical protein HMPREF9570_01974 [Propionibacterium acnes
HL043PA1]
gi|327446397|gb|EGE93051.1| hypothetical protein HMPREF9568_00979 [Propionibacterium acnes
HL013PA2]
gi|327452015|gb|EGE98669.1| hypothetical protein HMPREF9584_02221 [Propionibacterium acnes
HL092PA1]
gi|327454948|gb|EGF01603.1| hypothetical protein HMPREF9581_01136 [Propionibacterium acnes
HL087PA3]
gi|327457766|gb|EGF04421.1| hypothetical protein HMPREF9586_00342 [Propionibacterium acnes
HL083PA2]
gi|328752152|gb|EGF65768.1| hypothetical protein HMPREF9563_02421 [Propionibacterium acnes
HL020PA1]
gi|328755219|gb|EGF68835.1| hypothetical protein HMPREF9579_01246 [Propionibacterium acnes
HL087PA1]
gi|328758302|gb|EGF71918.1| hypothetical protein HMPREF9588_00942 [Propionibacterium acnes
HL025PA2]
gi|328760027|gb|EGF73608.1| hypothetical protein HMPREF9343_02235 [Propionibacterium acnes
HL099PA1]
gi|332675943|gb|AEE72759.1| putative transmembrane protein [Propionibacterium acnes 266]
Length = 216
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
Y + IL A+ + R +L+HI PGD GY FG+ YTW+ I ++I F V+M F
Sbjct: 98 YGVSILSAVLGAAESARHILLHIQPGDPGYGSKAFGLSTYTWAFITFTIVIAFCGVMMTF 157
Query: 79 DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT-QCFDNPTFYQLLN 129
V + + ++LF ++ AN + + GL +P Y+L+
Sbjct: 158 APWLTPRGVKAHAISTVIMWLFALIVVANLVMIVFLEGLHFLLPGDPACYELVQ 211
>gi|87306912|ref|ZP_01089058.1| conserved membrane protein [Blastopirellula marina DSM 3645]
gi|87290285|gb|EAQ82173.1| conserved membrane protein [Blastopirellula marina DSM 3645]
Length = 196
Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
Y + IL A+ I+TRQ+L+HI+P D GY PVFG+HLYTW+L+ +V+++ + ++F
Sbjct: 74 YGMSILAAVCGAAISTRQILLHIVPPDPGYGDPVFGLHLYTWALVVFVVVLIDSGLNLMF 133
Query: 79 D---TAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ-CFDNPTFYQLL 128
+ V V + I LF +I AN + + G D+P Y+L
Sbjct: 134 AGSLVTDQPVKFGSVSKGVIGLFGAVIVANLLCVFCQAGFHWILPDDPARYELF 187
>gi|282891246|ref|ZP_06299748.1| hypothetical protein pah_c050o008 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498743|gb|EFB41060.1| hypothetical protein pah_c050o008 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 169
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+ G L NL G++ HY++ +L + +A RQ+ +H+ PG + +PV G+ LYTWS
Sbjct: 48 VAAGLLLNLFFGVRMSHYALSLLSCLFGGFVALRQISLHVCPGFSTFGLPVLGLSLYTWS 107
Query: 62 LIFSLVIILFISVLMLF----DTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
I + IS+++ + ++ + + ++A+ L + + AN ++T L+CG
Sbjct: 108 FIVFACAVCAISLILFLYRPDKSEQVPLNQEWFSKLALGLTLAISLANILTTYLQCGWGV 167
Query: 118 C 118
C
Sbjct: 168 C 168
>gi|163857909|ref|YP_001632207.1| hypothetical protein Bpet3596 [Bordetella petrii DSM 12804]
gi|163261637|emb|CAP43939.1| putative membrane protein [Bordetella petrii]
Length = 192
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
M G+G L N+ G HY+++I ++ + A Q+L G+ P+FG+ +++W
Sbjct: 55 MAGVGLLLNIRLGPSPLHYAMVIAASLGGLVAAGNQLLAQASAGEPPSGPPLFGLSIHSW 114
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSP----VREIAIYLFVFLIFANFISTILECGLT 116
+ + ++ F +++ D A I + LF+ I N +T LECGL
Sbjct: 115 AFLAFCALLAFCVLMLAADRKWGDNALKKPVALPALIVMGLFLLAILVNVAATSLECGLG 174
Query: 117 QC 118
+C
Sbjct: 175 EC 176
>gi|332184486|gb|AEE26740.1| Putative inner membrane protein [Francisella cf. novicida 3523]
Length = 178
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+
Sbjct: 59 HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 118
Query: 72 ISVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++ L E K K + + ++AI L + L AN ++ +ECG C +P Y L +
Sbjct: 119 AAICGLITPNENKKKKLNILAKLAIILILILTLANTLNVFVECGPHLCPSDPNSYWLFS 177
>gi|328907652|gb|EGG27416.1| conserved membrane protein [Propionibacterium sp. P08]
Length = 188
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
Y + IL AI + R +L+HI PGD GY G+ YTW+ I +++I F V+M F
Sbjct: 70 YGVSILSAILGGAESARHILLHIQPGDPGYGSKALGLSTYTWAFITFVIVIAFCGVMMTF 129
Query: 79 DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT-QCFDNPTFYQLLN 129
V + + ++LF ++ AN + + G +P Y+L+
Sbjct: 130 APWLTPRGVKTHALSAVIMWLFALIVVANLVMIVFLEGFHVLLPGDPACYELVQ 183
>gi|115314520|ref|YP_763243.1| hypothetical protein FTH_0654 [Francisella tularensis subsp.
holarctica OSU18]
gi|115129419|gb|ABI82606.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica OSU18]
Length = 176
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 12 SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
G +HY ++IL A+ +A Q+L+HI+PG Y VF +H+YTW+ I S++ IL+
Sbjct: 62 HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 121
Query: 72 ISVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFY 125
++ L E K K S + ++AI L + L AN ++ +ECG C +P Y
Sbjct: 122 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSY 176
>gi|295131064|ref|YP_003581727.1| hypothetical protein HMPREF0675_4582 [Propionibacterium acnes
SK137]
gi|291377094|gb|ADE00949.1| conserved hypothetical protein [Propionibacterium acnes SK137]
Length = 188
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
Y + IL A+ + R +L+HI PGD GY FG+ YTW+ I ++I F V+M F
Sbjct: 70 YGVSILSAVLGAAESARHILLHIQPGDPGYGSKAFGLSTYTWAFITFTIVIAFCGVMMTF 129
Query: 79 DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT-QCFDNPTFYQLLN 129
V + + ++LF ++ AN + + GL +P Y+L+
Sbjct: 130 APWLTPRGVKAHAISTVIMWLFALIVVANLVMIVFLEGLHFLLPGDPACYELVQ 183
>gi|284007427|emb|CBA72860.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 151
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 79/99 (79%), Positives = 86/99 (86%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
MIGIGFLFNLI GI QRHYSI+I +ITTC+ ATRQVLIHILPGD GY VFG+HLYTW
Sbjct: 53 MIGIGFLFNLILGINQRHYSIIIFSSITTCMTATRQVLIHILPGDPGYYSTVFGLHLYTW 112
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFV 99
SL+FSL IILFISVLMLF+TAEI+VAKSP REIAIYL
Sbjct: 113 SLLFSLAIILFISVLMLFNTAEIQVAKSPAREIAIYLCF 151
>gi|159038828|ref|YP_001538081.1| hypothetical protein Sare_3287 [Salinispora arenicola CNS-205]
gi|157917663|gb|ABV99090.1| conserved hypothetical protein [Salinispora arenicola CNS-205]
Length = 197
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
Y + I+ A+ A RQ+L+HI+P D GY PV G+H YTW+ I V+++F V ++F
Sbjct: 74 YGLSIVAAVAGAAYAARQILLHIVPPDPGYGSPVLGLHPYTWAFITFCVVLVFCGVSLVF 133
Query: 79 DTA--EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ-CFDNPTFYQLLN 129
V ++ I LF+ ++ AN ++ ++ G +PT Y++ +
Sbjct: 134 GRELVPRGVRFGWPSKVVIGLFLVIVAANLVAVFVQEGFHWFLPADPTRYEIFD 187
>gi|161613607|ref|YP_001587572.1| hypothetical protein SPAB_01330 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161362971|gb|ABX66739.1| hypothetical protein SPAB_01330 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|323220563|gb|EGA05014.1| hypothetical protein SEEM0047_12171 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
Length = 132
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 74/113 (65%), Gaps = 4/113 (3%)
Query: 21 IMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDT 80
++I+G+I T ++A+RQ+ +HI+PGD GY FG+H YTW+LI S++II+ ++V++ +
Sbjct: 1 MVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVILAISS 60
Query: 81 AEIKVAKSPVR----EIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
+ + I ++F+ LI AN IST+LECG +C NP Y+LL+
Sbjct: 61 MNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLS 113
>gi|312882601|ref|ZP_07742341.1| membrane protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369761|gb|EFP97273.1| membrane protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 89
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 44 GDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVF 100
G GY P+FGMH YTW+ + +L +++L++ E S + L +
Sbjct: 1 GTPGYGSPIFGMHYYTWAFVLFGATVLGVALLLILWNEEWNSQSFTMSGFGRLVCLLAIT 60
Query: 101 LIFANFISTILECGLTQCFDNPTFYQLLN 129
+ NF+ST ECG +C +P Y L +
Sbjct: 61 AVALNFVSTFAECGPYECPADPVSYWLFS 89
>gi|289807693|ref|ZP_06538322.1| hypothetical protein Salmonellaentericaenterica_26102 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 121
Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 39 IHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAEIKVAKSPVR----EIA 94
HI+PGD GY FG+H YTW+LI S++II+ ++V++ + + I
Sbjct: 8 CHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLAISSMNAAFRSLNINPNLFSIV 67
Query: 95 IYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
++F+ LI AN IST+LECG +C NP Y+LL+
Sbjct: 68 GWVFLLLITANLISTVLECGGGECAANPVTYKLLS 102
>gi|255323029|ref|ZP_05364165.1| disulfide bond formation protein, DsbB family [Campylobacter showae
RM3277]
gi|255299891|gb|EET79172.1| disulfide bond formation protein, DsbB family [Campylobacter showae
RM3277]
Length = 515
Score = 90.6 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 59/138 (42%), Gaps = 14/138 (10%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
++G+ + L G+K R+ + ++ GA + RQ + G+ +FG H YT
Sbjct: 53 VVGVAGILILRYGLKARYIAAVLFGAAYGIFMTLRQASFSLYRDVGMGFGGDIFGAHTYT 112
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK-----------SPVREIAIYLFVFLIFANFIS 108
W ++ V+++ + ++MLF ++ + + I L +F+I +N +
Sbjct: 113 WGILVYWVVVVAMGLMMLFAKDKVVSGDIARSDTRIKPLNAYSKFVIALSLFVILSNAVQ 172
Query: 109 TILECG--LTQCFDNPTF 124
++ G +P
Sbjct: 173 ALISAGIPPYSGKGDPER 190
>gi|302535716|ref|ZP_07288058.1| predicted protein [Streptomyces sp. C]
gi|302444611|gb|EFL16427.1| predicted protein [Streptomyces sp. C]
Length = 216
Score = 86.8 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLML- 77
+ + I+ A+ ++ QVL+HI+P D GY+ +FG+HLYTW+ I L+ +L +V ++
Sbjct: 95 WGVAIVSALIGSTVSASQVLMHIVPPDPGYAGALFGLHLYTWAAITFLLAVLAAAVNLVL 154
Query: 78 ---FDTAEIKVAKSPVREIA---IYLFVFLIFANFISTILECGLT-QCFDNPTFYQLL 128
F A +R A + + F +N ++ L GL Q +PT Y+
Sbjct: 155 AREFQPLGAAQASPALRRAAGFTLAVLAFFAVSNLVACFLLQGLHWQMPGDPTGYRFF 212
>gi|223039067|ref|ZP_03609358.1| disulfide bond formation protein, DsbB family [Campylobacter rectus
RM3267]
gi|222879706|gb|EEF14796.1| disulfide bond formation protein, DsbB family [Campylobacter rectus
RM3267]
Length = 515
Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 59/138 (42%), Gaps = 14/138 (10%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
++G+ + L G+K R+ ++ GA + R + G+ +FG H YT
Sbjct: 53 VVGVAGILILRYGLKARYIVAVLFGAAYGIFMTLRHASFSLYRDVGMGFGGDIFGAHTYT 112
Query: 60 WSLIFSLVIILFISVLMLF----------DTAEIKVAK-SPVREIAIYLFVFLIFANFIS 108
W ++ V+++ + ++MLF A+ +V + + I L +F+I +N +
Sbjct: 113 WGILVYWVVVVAMGLMMLFAKDKVVSNDIARADTRVKPLNAYSKFVIALSLFVILSNAVQ 172
Query: 109 TILECG--LTQCFDNPTF 124
++ G +P
Sbjct: 173 ALISSGIPPYSGKGDPER 190
>gi|213021900|ref|ZP_03336347.1| hypothetical protein Salmonelentericaenterica_03902 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 97
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Query: 37 VLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAEIKVAKSPVR----E 92
+ HI+PGD GY FG+H YTW+LI S++II+ ++V++ + +
Sbjct: 5 IFCHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLAISSMNAAFRSLNINPNLFS 64
Query: 93 IAIYLFVFLIFANFISTILECGLTQCFDNPTF 124
I ++F+ LI AN IST+LECG +C NP
Sbjct: 65 IVGWVFLLLITANLISTVLECGGGECAANPVH 96
>gi|157963725|ref|YP_001503759.1| disulfide bond formation protein DsbB [Shewanella pealeana ATCC
700345]
gi|157848725|gb|ABV89224.1| Disulphide bond formation protein DsbB [Shewanella pealeana ATCC
700345]
Length = 484
Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 8/132 (6%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
++ + +F + G+K ++ +I+ A+ R HIL G+ +FG+H Y
Sbjct: 51 LVSLIAIFIMRYGLKPKYIGALIITAVYGLWAGYRHSSAHILRDIGQGFGPAIFGVHTYV 110
Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFANFISTILECG 114
W ++ +I+LF VLML S + ++ + +F+ +I N + + G
Sbjct: 111 WVIVVFAIILLFAGVLMLLQGDKLVEKSDSSEWSLLNKVTVNVFLVIICFNIVQAFTQTG 170
Query: 115 LTQC--FDNPTF 124
+P
Sbjct: 171 PFPYIGQSDPVR 182
>gi|167622296|ref|YP_001672590.1| disulfide bond formation protein DsbB [Shewanella halifaxensis
HAW-EB4]
gi|167352318|gb|ABZ74931.1| Disulphide bond formation protein DsbB [Shewanella halifaxensis
HAW-EB4]
Length = 483
Score = 83.7 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 8/132 (6%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
++ + +F + G+K ++ +I+ A+ R HIL G+ +FG+H Y
Sbjct: 50 LVSLIAIFIMRYGLKPKYIGALIITAVYGLWAGYRHSSAHILRDIGQGFGPAIFGVHTYV 109
Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFANFISTILECG 114
W ++ +I+LF VLML S + +I + +F+ +I N + + G
Sbjct: 110 WVIVVFAIILLFAGVLMLLQGDKLVEKSDSSEWSLLNKITVNVFLVIIGFNIVQAFTQTG 169
Query: 115 LTQC--FDNPTF 124
+P
Sbjct: 170 PFPYIGQSDPVR 181
>gi|254384695|ref|ZP_05000033.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194343578|gb|EDX24544.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 214
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 9/119 (7%)
Query: 19 YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
+ + ++ A + RQ +HILPG G V G+HLY W+ I + + I V++ F
Sbjct: 74 WGLALVAATGGSFASWRQTALHILPGAKGQGAEVLGLHLYVWAWILFQLSVAAIGVVLAF 133
Query: 79 -----DTAEIKVAKSPVREIAIYLFVFL---IFANFISTILECGLTQ-CFDNPTFYQLL 128
D A P R + ++ FL + + + LE G D+P Y+
Sbjct: 134 AHATADRAIPTSGPGPYRAVGLFALWFLGAAVALSLAAVFLEQGFHWFLPDDPGRYEFF 192
>gi|170728156|ref|YP_001762182.1| disulfide bond formation protein DsbB [Shewanella woodyi ATCC
51908]
gi|169813503|gb|ACA88087.1| Disulphide bond formation protein DsbB [Shewanella woodyi ATCC
51908]
Length = 482
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
++ + +F G+K ++ +IL ++ R HIL G+ +FG+H Y
Sbjct: 52 LVALIAIFITRYGLKPKYLGALILASVYGLWAGYRHSSNHILKDIGQGFGPAIFGVHTYV 111
Query: 60 WSLIFSLVIILFISVLML-----FDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECG 114
W ++ LVI+LF +VL++ E K + + + + +F+ +I N + + G
Sbjct: 112 WVMVVFLVILLFAAVLLMLQGDKLSEKEDKNSWTLLNRSTVMVFLVVIGFNIVQAFSQTG 171
Query: 115 LTQ 117
Sbjct: 172 PFP 174
>gi|222824494|ref|YP_002576068.1| disulfide bond formation protein, DsbB family [Campylobacter lari
RM2100]
gi|222539715|gb|ACM64816.1| disulfide bond formation protein, DsbB family [Campylobacter lari
RM2100]
Length = 505
Score = 77.9 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 17/141 (12%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K + + +++ + + H D G+ +P+FG+H Y W
Sbjct: 55 IGVAALFVVRYGMKGKFLAFLLIATAFGLWQSFNHISGHAHRDLDQGFGLPIFGLHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK----------SPVREIAIYLFVFLIFANFISTI 110
+ + ++L + V+ F K S A+ + F++ +N
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFGSFEKEMEGASFRKLSKFNLAAMVIVAFIVASNVFQAF 174
Query: 111 LECGL----TQCFDNPTFYQL 127
+ G Q +P + L
Sbjct: 175 VSTGPIPYSGQ--GDPVRFSL 193
>gi|261886322|ref|ZP_06010361.1| DsbB family disulfide bond formation protein [Campylobacter fetus
subsp. venerealis str. Azul-94]
Length = 498
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 55/137 (40%), Gaps = 11/137 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60
I + LF L G K ++ +++++ + + H L G+ + + G+H W
Sbjct: 51 ISVAALFVLRYGFKPKYLAMILIITAVGLWESFYHLGNHALEDVGQGFGVAILGLHTQFW 110
Query: 61 SLIFSLVIILFISVLMLFDT--AEIKVAKSPVRE------IAIYLFVFLIFANFISTILE 112
+ + ++ + V++ F E + R+ +A ++F +I +N + +
Sbjct: 111 AEVVFWAVVFLLGVILFFAPNLKEFEDEAYKFRKLTSANIVAFWVFFIVIVSNIVQAFIS 170
Query: 113 CGLTQCF--DNPTFYQL 127
G +P Y+
Sbjct: 171 TGPPPFLGQGDPVRYRW 187
>gi|118475681|ref|YP_892774.1| DsbB family disulfide bond formation protein [Campylobacter fetus
subsp. fetus 82-40]
gi|118414907|gb|ABK83327.1| disulfide bond formation protein, DsbB family [Campylobacter fetus
subsp. fetus 82-40]
Length = 499
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 54/135 (40%), Gaps = 11/135 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60
I + LF L G K ++ +++++ + + H L G+ + + G+H W
Sbjct: 52 ISVAALFVLRYGFKPKYLAMILIITAVGLWESFYHLGNHALEDVGQGFGVAILGLHTQFW 111
Query: 61 SLIFSLVIILFISVLMLFDT--AEIKVAKSPVRE------IAIYLFVFLIFANFISTILE 112
+ + ++ + V++ F E + R+ +A ++F +I +N + +
Sbjct: 112 AEVVFWAVVFLLGVILFFAPNLKEFEDEAYKFRKLTSANIVAFWVFFIVIVSNIVQAFIS 171
Query: 113 CGLTQCF--DNPTFY 125
G +P Y
Sbjct: 172 TGPPPFLGQGDPVRY 186
>gi|242310377|ref|ZP_04809532.1| disulfide bond formation protein [Helicobacter pullorum MIT
98-5489]
gi|239522775|gb|EEQ62641.1| disulfide bond formation protein [Helicobacter pullorum MIT
98-5489]
Length = 505
Score = 74.8 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 56/139 (40%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K ++ + +++ A + Q +H + D G+ + VFG+H Y W
Sbjct: 55 IGVMALFIVRYGMKGKYIAAILIMAAFGLYQSFAQYGMHAMRDLDQGFGLAVFGLHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVRE----------IAIYLFVFLIFANFISTI 110
+ + ++L + V+ F + + ++ + +I +N
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFGEFDVEMAGKKFREWTKLSFASVVIVTLIIASNVFQAF 174
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 175 VSTGIPPYAGQGDPVRFSL 193
>gi|224418545|ref|ZP_03656551.1| disulfide bond formation protein, DsbB family [Helicobacter
canadensis MIT 98-5491]
gi|253826902|ref|ZP_04869787.1| disulfide bond formation protein, DsbB family [Helicobacter
canadensis MIT 98-5491]
gi|313142073|ref|ZP_07804266.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253510308|gb|EES88967.1| disulfide bond formation protein, DsbB family [Helicobacter
canadensis MIT 98-5491]
gi|313131104|gb|EFR48721.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 505
Score = 73.7 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 55/139 (39%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G K ++ + +++ A + Q +H + D G+ + VFG+H Y W
Sbjct: 55 IGVMALFIVRYGFKGKYVAAILVMAAFGLYQSFAQYGMHAMRDLDQGFGLAVFGLHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVRE----------IAIYLFVFLIFANFISTI 110
+ I ++L + V+ F + + ++ + +I +N
Sbjct: 115 AEIVFWAVVLLLGVIFAFAPKFSEFEVEMAGKKVREWTKLSFASVVVVTLIIASNVFQAF 174
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 175 VSTGVPPYAGQGDPVRFSL 193
>gi|153001068|ref|YP_001366749.1| disulfide bond formation protein DsbB [Shewanella baltica OS185]
gi|151365686|gb|ABS08686.1| Disulphide bond formation protein DsbB [Shewanella baltica OS185]
Length = 478
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
++ + L+ + G+K ++ + ++ I +A+ I++ G+S+ + G H YT
Sbjct: 50 LVALTALYIVRFGLKPKYIAALVWLGIYGAFMASVHTSINLGSDIGQGFSLKIMGAHTYT 109
Query: 60 WSLIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILEC 113
W+L + +++ +++LML + K + ++A ++F+ +I N + +
Sbjct: 110 WALFVFVTVLIVVALLMLTLGNKFPNNGYGKQPLDTLPKVACWIFLVVISGNIVQAFTQT 169
Query: 114 GL 115
G
Sbjct: 170 GP 171
>gi|154174738|ref|YP_001408864.1| DsbB family disulfide bond formation protein [Campylobacter curvus
525.92]
gi|112803685|gb|EAU01029.1| disulfide bond formation protein, DsbB family [Campylobacter curvus
525.92]
Length = 504
Score = 71.8 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K R+ +++++ A + IH + D G+ + VFG+H Y W
Sbjct: 55 IGVMALFIVRYGMKARYLAMILIMAGFGLWQSFAHYGIHAMRDLDQGFGLAVFGIHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK----------SPVREIAIYLFVFLIFANFISTI 110
+ + ++L + V+ F + + A + +I +N
Sbjct: 115 AEVVFWAVVLLLGVIFFFAPKFSAFDEELDGEKFRRFTKASLCAFVIATLIIASNVFQAF 174
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 175 VSTGVPPYYGQGDPVRFTL 193
>gi|208434515|ref|YP_002266181.1| DsbB-like protein [Helicobacter pylori G27]
gi|208432444|gb|ACI27315.1| DsbB-like protein [Helicobacter pylori G27]
Length = 490
Score = 70.2 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSPVR---EIAIYLFVFLIFANFISTILECGLT 116
W+L ++ ++VL+ F P+ + A Y+F ++ +N + + G
Sbjct: 111 WALFVFFSVVALLAVLLFFAPNTQLSKDYPLNALQKSAFYVFFMVVGSNAVQAFISTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|217032036|ref|ZP_03437537.1| hypothetical protein HPB128_187g63 [Helicobacter pylori B128]
gi|298736288|ref|YP_003728814.1| hypothetical protein HPB8_793 [Helicobacter pylori B8]
gi|216946346|gb|EEC24952.1| hypothetical protein HPB128_187g63 [Helicobacter pylori B128]
gi|298355478|emb|CBI66350.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 490
Score = 70.2 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLT 116
W+L ++ ++VL+ F + +++ A Y+F ++ +N + G
Sbjct: 111 WALFVFFSVVALLAVLLFFAPNTQPFKVRLLNTLQKSAFYVFFIVVGSNAVQAFFSTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|30025000|gb|AAO61477.1| unknown [Legionella pneumophila]
Length = 80
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
+G+ F+ NL+ GI+ HY +M+L + I+ RQ+ IH+ PGD GY +FG+HLYTWS
Sbjct: 17 VGLCFVMNLMLGIRASHYGLMLLATLLGLSISVRQMYIHLTPGDPGYGGLIFGLHLYTWS 76
Query: 62 LIFS 65
I
Sbjct: 77 AIIF 80
>gi|15611609|ref|NP_223260.1| hypothetical protein jhp0542 [Helicobacter pylori J99]
gi|4155079|gb|AAD06114.1| putative [Helicobacter pylori J99]
Length = 490
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLT 116
W+L ++ ++VL+ F + +++ A Y+F ++ +N + + G
Sbjct: 111 WALFVFFSVVALLAVLLFFAPNAQPFKDRLLNTLQKSAFYVFFIVVGSNAVQAFVSTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|317009389|gb|ADU79969.1| dsbb-like protein [Helicobacter pylori India7]
Length = 490
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLT 116
W+L ++ ++VL+ F + +++ A Y+F ++ +N + G
Sbjct: 111 WALFVFFSVVALLAVLLFFAPNTQLFKDRSLNALQKSAFYIFFMVVGSNAVQAFFSTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|237753331|ref|ZP_04583811.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229375598|gb|EEO25689.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 505
Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ F + GIK ++ S +++ + H + D G+ + VFG+H Y W
Sbjct: 55 IGVIAFFIIRYGIKGKYVSALLIVTAFGLYQSLAHFGNHAMRDLDQGFGLAVFGIHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVRE----------IAIYLFVFLIFANFISTI 110
+ + ++L + V+ F + + IA+ + F+I +N
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFGEFDTEMAGKKIRDWTKFSFIAVLITTFIIASNVFQAF 174
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 175 VSTGIPPYAGQGDPVRFSL 193
>gi|305432553|ref|ZP_07401714.1| DsbB family disulfide bond formation protein [Campylobacter coli
JV20]
gi|5921219|emb|CAB56502.1| putative membrane protein CjaE [Campylobacter jejuni]
gi|304444264|gb|EFM36916.1| DsbB family disulfide bond formation protein [Campylobacter coli
JV20]
Length = 505
Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 52/139 (37%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W
Sbjct: 55 IGVIALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK----------SPVREIAIYLFVFLIFANFISTI 110
+ + ++L + V+ F K + A+ + ++ +N
Sbjct: 115 AEVVFWAVVLLLGVMFAFAPKFGSFDKELNGEKFRKFTKFSFAAVLISTLIVASNVFQAF 174
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193
>gi|307637283|gb|ADN79733.1| putative ATP/GTP binding protein [Helicobacter pylori 908]
gi|325995873|gb|ADZ51278.1| putative ATP /GTP binding protein [Helicobacter pylori 2018]
gi|325997468|gb|ADZ49676.1| hypothetical protein hp2017_0582 [Helicobacter pylori 2017]
Length = 490
Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLT 116
W+L +I ++VL+ F + +++ A Y+F ++ +N I + G
Sbjct: 111 WALFVFFSVITLLAVLLFFAPNAQPFKDRLLNTLQKSAFYVFFMVVGSNAIQAFVSTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|57169011|ref|ZP_00368139.1| probable ATP /GTP binding protein Cj0017c [Campylobacter coli
RM2228]
gi|57019556|gb|EAL56246.1| probable ATP /GTP binding protein Cj0017c [Campylobacter coli
RM2228]
Length = 505
Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 52/139 (37%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W
Sbjct: 55 IGVIALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK----------SPVREIAIYLFVFLIFANFISTI 110
+ + ++L + V+ F K + A+ + ++ +N
Sbjct: 115 AEVVFWAVVLLLGVMFAFAPKFGSFDKELNGEKFRKFTKFSFAAVLISTLIVASNVFQAF 174
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193
>gi|223040679|ref|ZP_03610948.1| disulfide bond formation protein, DsbB family [Campylobacter rectus
RM3267]
gi|222878043|gb|EEF13155.1| disulfide bond formation protein, DsbB family [Campylobacter rectus
RM3267]
Length = 518
Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 10/124 (8%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGD--LGYSIPVFGMHLY 58
+IG+ +F L G K ++ S + + A ++ R + D +G+ +FG H Y
Sbjct: 49 LIGVLGIFILRYGAKIKYVSAVFICAAYGLFMSIRHTSLDGFAWDVGMGFGDAIFGAHTY 108
Query: 59 TWSLIFSLVIILFISVLMLFDTA-----EIKVAKSPVRE---IAIYLFVFLIFANFISTI 110
TW ++L + V++LF E + +P + + +I +N
Sbjct: 109 TWGAFVYWAVVLVMPVMLLFAPKVQNLDEQSESFNPFSAYTTAIVAISFAVIVSNAFQAF 168
Query: 111 LECG 114
G
Sbjct: 169 FSTG 172
>gi|283956195|ref|ZP_06373680.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1336]
gi|283792349|gb|EFC31133.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1336]
Length = 508
Score = 68.3 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 52/139 (37%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W
Sbjct: 55 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDT----------AEIKVAKSPVREIAIYLFVFLIFANFISTI 110
+ + ++L + V+ F E + A+ + ++ +N
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSLAAVVISAIVVASNVFQAF 174
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193
>gi|109947915|ref|YP_665143.1| hypothetical protein Hac_1414 [Helicobacter acinonychis str.
Sheeba]
gi|109715136|emb|CAK00144.1| conserved hypothetical protein [Helicobacter acinonychis str.
Sheeba]
Length = 490
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLT 116
W+L +++ +++L+ F + +++ A Y+F ++ +N + G
Sbjct: 111 WALFVFFSVVVSLALLLFFSPNIHNFKDRSLNMLQKSAFYIFFIVVGSNAMQAFFSTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|317012409|gb|ADU83017.1| dsbb-like protein [Helicobacter pylori Lithuania75]
Length = 490
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLT 116
W+L + + ++VL+ F + +++ A Y+F ++ +N + G
Sbjct: 111 WALFVFFSVAVLLAVLLFFAPNTQLFKDDSLNALQKSAFYVFFMVVGSNAVQAFFSTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|315638055|ref|ZP_07893240.1| DsbB family disulfide bond formation protein [Campylobacter
upsaliensis JV21]
gi|315481903|gb|EFU72522.1| DsbB family disulfide bond formation protein [Campylobacter
upsaliensis JV21]
Length = 505
Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 53/139 (38%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W
Sbjct: 55 IGVIALFIVRYGLKGKYLAALLIMTAFGLYQSFAHFGNHAHRDLDQGFGLAVFGIHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVRE----------IAIYLFVFLIFANFISTI 110
+ + ++L + V+ F E +A+ + F++ +N
Sbjct: 115 AEVVFWAVVLILGVIFAFAPKFSAFETEMAGEKFRQWTKFSFVAVLISTFIVASNVFQAF 174
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 175 VSTGVPPYVGQGDPVRFSL 193
>gi|223039985|ref|ZP_03610267.1| disulfide bond formation protein, DsbB family [Campylobacter rectus
RM3267]
gi|222878705|gb|EEF13804.1| disulfide bond formation protein, DsbB family [Campylobacter rectus
RM3267]
Length = 504
Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 53/139 (38%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K ++ +++++ + IH D G+ + VFG+H Y W
Sbjct: 55 IGVMALFIVRYGLKAKYLAMLLVMTGFGLWQSFAHFGIHAHRDLDQGFGLAVFGIHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSP----------VREIAIYLFVFLIFANFISTI 110
+ + +++ + + F + + A + F+I +N
Sbjct: 115 AEVVFWAVVVLLGAIFFFAPKFSALEEEMGGDTIRKFGSFTRAAFIVCAFIIASNVFQAF 174
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 175 VSTGIPPYYGQGDPVRFTL 193
>gi|261867547|ref|YP_003255469.1| DsbB family disulfide bond formation protein [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412879|gb|ACX82250.1| DsbB family disulfide bond formation protein [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 499
Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 16/140 (11%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
+ FL + G K ++ +I A+ R G+ + G H Y+W
Sbjct: 51 VMFTFLI-IRYGPKPKYIGWVIFIAVFGIFAGFRHSSGSFAWDIHQGWWAEILGAHTYSW 109
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKS------PVREIAIYLFVFLIFANFISTILECG 114
++ V+++F++++ F + + + +F+ +I N + + G
Sbjct: 110 PMVIHAVVLIFVALIFCFTKDIYNFVSQSHKQLNILSKTCMAIFMIVICGNMVQAFISTG 169
Query: 115 --LTQCFDNPTF------YQ 126
NP Y
Sbjct: 170 LPPNMGVSNPARLSFNSDYW 189
>gi|293391425|ref|ZP_06635759.1| DsbB family disulfide bond formation protein [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951959|gb|EFE02078.1| DsbB family disulfide bond formation protein [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 499
Score = 66.7 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 16/140 (11%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
+ FL + G K ++ +I A+ R G+ + G H Y+W
Sbjct: 51 VMFTFLI-IRYGPKPKYIGWVIFIAVFGIFAGFRHSSGSFAWDIHQGWWAEILGAHTYSW 109
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKS------PVREIAIYLFVFLIFANFISTILECG 114
++ V+++F++++ F + + + +F+ +I N + + G
Sbjct: 110 PMVIHAVVLIFVALIFCFTKDIYNFVSQSHKQLNILSKTCMAIFMIVICGNMVQAFISTG 169
Query: 115 --LTQCFDNPTF------YQ 126
NP Y
Sbjct: 170 LPPNMGVSNPARLSFNSDYW 189
>gi|86152351|ref|ZP_01070561.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
subsp. jejuni 260.94]
gi|315123630|ref|YP_004065634.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|85840648|gb|EAQ57900.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
subsp. jejuni 260.94]
gi|315017352|gb|ADT65445.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
Length = 508
Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 55/139 (39%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W
Sbjct: 55 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDTA----EIKVAKSPVRE------IAIYLFVFLIFANFISTI 110
+ + ++L + V+ F E ++ R+ A+ + ++ +N
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAF 174
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193
>gi|283953650|ref|ZP_06371181.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 414]
gi|283794691|gb|EFC33429.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 414]
Length = 508
Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W
Sbjct: 55 IGVIALFIVRYGMKGKYLAALLIVTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK----------SPVREIAIYLFVFLIFANFISTI 110
+ + ++L + V+ F + A+ + ++ +N
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNSFEAELNGAKFRKYTKFSFAAVLISTIIVASNVFQAF 174
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 175 VSTGVPPYLGQGDPVRFSL 193
>gi|86154001|ref|ZP_01072203.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
subsp. jejuni HB93-13]
gi|85842539|gb|EAQ59752.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
subsp. jejuni HB93-13]
gi|307746980|gb|ADN90250.1| Putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni M1]
Length = 508
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 52/139 (37%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W
Sbjct: 55 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDT----------AEIKVAKSPVREIAIYLFVFLIFANFISTI 110
+ + ++L + V+ F E + A+ + ++ +N
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAF 174
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193
>gi|57236929|ref|YP_178044.1| DsbB family disulfide bond formation protein [Campylobacter jejuni
RM1221]
gi|148926833|ref|ZP_01810512.1| putative ATP /GTP binding protein [Campylobacter jejuni subsp.
jejuni CG8486]
gi|205355757|ref|ZP_03222527.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni CG8421]
gi|57165733|gb|AAW34512.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
RM1221]
gi|145844558|gb|EDK21665.1| putative ATP /GTP binding protein [Campylobacter jejuni subsp.
jejuni CG8486]
gi|205346534|gb|EDZ33167.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni CG8421]
gi|315057458|gb|ADT71787.1| Putative ATP /GTP binding protein [Campylobacter jejuni subsp.
jejuni S3]
Length = 508
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 52/139 (37%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W
Sbjct: 55 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDT----------AEIKVAKSPVREIAIYLFVFLIFANFISTI 110
+ + ++L + V+ F E + A+ + ++ +N
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAF 174
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193
>gi|86150526|ref|ZP_01068750.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
subsp. jejuni CF93-6]
gi|121613521|ref|YP_999737.1| DsbB family disulfide bond formation protein [Campylobacter jejuni
subsp. jejuni 81-176]
gi|167004713|ref|ZP_02270471.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
subsp. jejuni 81-176]
gi|218561710|ref|YP_002343489.1| disulphide bond formation protein [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|85838978|gb|EAQ56243.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
subsp. jejuni CF93-6]
gi|87248957|gb|EAQ71919.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
subsp. jejuni 81-176]
gi|112359416|emb|CAL34198.1| disulphide bond formation protein [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|284925320|gb|ADC27672.1| DsbB family disulfide bond formation protein [Campylobacter jejuni
subsp. jejuni IA3902]
gi|315929943|gb|EFV09100.1| disulfide bond formation protein DsbB family protein [Campylobacter
jejuni subsp. jejuni 305]
Length = 508
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 52/139 (37%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W
Sbjct: 55 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDT----------AEIKVAKSPVREIAIYLFVFLIFANFISTI 110
+ + ++L + V+ F E + A+ + ++ +N
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAF 174
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193
>gi|88597728|ref|ZP_01100961.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
subsp. jejuni 84-25]
gi|88190032|gb|EAQ94008.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
subsp. jejuni 84-25]
Length = 508
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 52/139 (37%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W
Sbjct: 55 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDT----------AEIKVAKSPVREIAIYLFVFLIFANFISTI 110
+ + ++L + V+ F E + A+ + ++ +N
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAF 174
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193
>gi|223038973|ref|ZP_03609265.1| conserved hypothetical protein [Campylobacter rectus RM3267]
gi|222879946|gb|EEF15035.1| conserved hypothetical protein [Campylobacter rectus RM3267]
Length = 519
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 49/124 (39%), Gaps = 13/124 (10%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYT 59
++G+ LF L G + R+ + A + R + + D+G + G+ YT
Sbjct: 52 LVGLLGLFILRYGPRPRYVVAVFFIAAFGMHMGLRHLGNFVQLDVDMGLGASILGVRTYT 111
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK------------SPVREIAIYLFVFLIFANFI 107
W+ I +++ +S+ ++F ++ + ++ YL L+ +N +
Sbjct: 112 WAAIVYWAVVIVMSLFLIFIKKSAELNADFSGQRSVIKPFNAYGKVVFYLSFALVISNGV 171
Query: 108 STIL 111
Sbjct: 172 QAFF 175
>gi|315928445|gb|EFV07757.1| disulfide bond formation protein DsbB family protein [Campylobacter
jejuni subsp. jejuni DFVF1099]
Length = 495
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 52/139 (37%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W
Sbjct: 42 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 101
Query: 61 SLIFSLVIILFISVLMLFDT----------AEIKVAKSPVREIAIYLFVFLIFANFISTI 110
+ + ++L + V+ F E + A+ + ++ +N
Sbjct: 102 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAF 161
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 162 VSTGVPPYVGQGDPVRFSL 180
>gi|153950977|ref|YP_001397289.1| DsbB family disulfide bond formation protein [Campylobacter jejuni
subsp. doylei 269.97]
gi|152938423|gb|ABS43164.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
subsp. doylei 269.97]
Length = 508
Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W
Sbjct: 55 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK----------SPVREIAIYLFVFLIFANFISTI 110
+ + ++L + V+ F + A+ + ++ +N
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFETELNGEKFRKYTKFSFTAVLISAIIVASNVFQAF 174
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193
>gi|157414338|ref|YP_001481594.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
subsp. jejuni 81116]
gi|157385302|gb|ABV51617.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 81116]
gi|315931289|gb|EFV10258.1| disulfide bond formation protein DsbB family protein [Campylobacter
jejuni subsp. jejuni 327]
Length = 508
Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W
Sbjct: 55 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK----------SPVREIAIYLFVFLIFANFISTI 110
+ + ++L + V+ F + A+ + ++ +N
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFETELNGEKFRKYTKFSFAAVLISTIIVASNVFQAF 174
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193
>gi|260913349|ref|ZP_05919830.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260632580|gb|EEX50750.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 497
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 16/140 (11%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
+ F+ + G K ++ +I + R G+ + G H YTW
Sbjct: 51 VMFAFMI-VRYGPKPKYVGWIIFIGVFGMFAGFRHSSGSFAWDIHQGWWAEILGAHTYTW 109
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAK------SPVREIAIYLFVFLIFANFISTILECG 114
++ V+++F ++L LF S + + + F+ ++ N + + G
Sbjct: 110 PIVIQGVVLVFTALLFLFTKNVYSFVSESYKPFSKLTKTTMVAFMVVVAGNIVQAFISTG 169
Query: 115 --LTQCFDNPTF------YQ 126
NPT Y
Sbjct: 170 YPPNMGVGNPTRLSFNPDYW 189
>gi|57505823|ref|ZP_00371748.1| probable ATP /GTP binding protein Cj0017c [Campylobacter
upsaliensis RM3195]
gi|57015853|gb|EAL52642.1| probable ATP /GTP binding protein Cj0017c [Campylobacter
upsaliensis RM3195]
Length = 505
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 52/139 (37%), Gaps = 13/139 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
IG+ LF + G+K ++ + +++ + H D G+ + VFG+H Y W
Sbjct: 55 IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114
Query: 61 SLIFSLVIILFISVLMLFDT----------AEIKVAKSPVREIAIYLFVFLIFANFISTI 110
+ + ++L + V+ F E + A+ + ++ +N
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKIRKYTKFSFAAVLISTIIVASNVFQAF 174
Query: 111 LECG--LTQCFDNPTFYQL 127
+ G +P + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193
>gi|217033540|ref|ZP_03438969.1| hypothetical protein HP9810_905g59 [Helicobacter pylori 98-10]
gi|216944065|gb|EEC23496.1| hypothetical protein HP9810_905g59 [Helicobacter pylori 98-10]
Length = 489
Score = 64.4 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + H L G+S+ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYEGFYYTGSHALEDVGQGFSLAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
W+L ++ + VL+ F + + +++ A Y+F ++ +N + + G
Sbjct: 111 WALFVFFSVVAILGVLLFFAPNTQLFKDYSLNTLQKSAFYIFFIVVGSNAVQAFISTGPF 170
Query: 117 Q 117
Sbjct: 171 P 171
>gi|83269709|ref|YP_419000.1| Frizzled protein [Brucella melitensis biovar Abortus 2308]
gi|237817269|ref|ZP_04596261.1| Frizzled protein [Brucella abortus str. 2308 A]
gi|82939983|emb|CAJ13012.1| Frizzled protein [Brucella melitensis biovar Abortus 2308]
gi|237788082|gb|EEP62298.1| Frizzled protein [Brucella abortus str. 2308 A]
Length = 208
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127
Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFA----NFISTI 110
WS++ +LV+I +V M+ ++ PV + + A N S
Sbjct: 128 WSILIALVLIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 188 VQCGVGQC 195
>gi|317177572|dbj|BAJ55361.1| DsbB-like protein [Helicobacter pylori F16]
Length = 489
Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + H L G+S+ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYEGFYYTGSHALEDVGQGFSLAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
W+L ++ + VL+ F + + +++ A Y+F ++ +N + + G
Sbjct: 111 WALFVFFSVVALLGVLLFFAPNTQLFKDYSLNTLQKSAFYIFFIVVGSNAVQAFISTGPF 170
Query: 117 Q 117
Sbjct: 171 P 171
>gi|33592616|ref|NP_880260.1| hypothetical protein BP1525 [Bordetella pertussis Tohama I]
gi|33572262|emb|CAE41814.1| putative membrane protein [Bordetella pertussis Tohama I]
gi|332382033|gb|AEE66880.1| hypothetical protein BPTD_1507 [Bordetella pertussis CS]
Length = 159
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 45/107 (42%), Gaps = 12/107 (11%)
Query: 9 NLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVI 68
N+ G HY++++ A+ A Q+L P + P G W+ + +
Sbjct: 61 NVRMGPSPLHYAMVLAPALGGLTAAGWQLL---SPDAGAAAPPWQG-----WAFLLFGAM 112
Query: 69 ILFISVLMLFDTAEIKVA-KSPV---REIAIYLFVFLIFANFISTIL 111
+++ ++++ D A K PV + + LF+ + AN T L
Sbjct: 113 LVYCTLMLAADRKWGDNALKKPVALPGALVMGLFLVAVLANAAGTAL 159
>gi|297379797|gb|ADI34684.1| DsbB-like protein [Helicobacter pylori v225d]
Length = 490
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 58/131 (44%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
W+L +++F++VL+ F + + +++ A Y+F ++ +N + G
Sbjct: 111 WALFVFFSVVVFLAVLLFFAPNTQLFKDYSLNTLQKSAFYVFFIVVGSNAVQAFFSTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|108563000|ref|YP_627316.1| hypothetical protein HPAG1_0575 [Helicobacter pylori HPAG1]
gi|107836773|gb|ABF84642.1| DsbB-like protein [Helicobacter pylori HPAG1]
Length = 490
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 56/130 (43%), Gaps = 6/130 (4%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60
IG L + G K ++ ++++L A + + H L G+++ + G+H W
Sbjct: 52 IGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQFW 111
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKS---PVREIAIYLFVFLIFANFISTILECGLTQ 117
+L +++F++VL+ F +++ A Y+F ++ +N + + G
Sbjct: 112 ALFVFFSVVVFLAVLLFFAPNTQPFKDHSLNALQKSAFYVFFIVVGSNAVQAFISTGPFP 171
Query: 118 C--FDNPTFY 125
+P +
Sbjct: 172 YIGQSDPVRF 181
>gi|322380685|ref|ZP_08054830.1| disulfide bond formation protein [Helicobacter suis HS5]
gi|321146895|gb|EFX41650.1| disulfide bond formation protein [Helicobacter suis HS5]
Length = 569
Score = 61.0 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60
I + LF L G+K ++ ++M+L + + + H L G+++ +F +H W
Sbjct: 51 IALSGLFILRYGLKPKYIALMLLIIVGGLYQSFYHLGNHALEDVGQGFALTIFRLHTQFW 110
Query: 61 SLIFSLVIILFISVLML----FDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
+ + + L + L+ F+T + + A +F L+ +N + + G
Sbjct: 111 AELVFWLAALVLGSLLFFAPNFNTQDHPRQLTRSNRWAFAIFSALVASNMLQAFISTGPF 170
Query: 117 QCF--DNPTFY 125
NP +
Sbjct: 171 PYLGHGNPIRF 181
>gi|322378597|ref|ZP_08053037.1| DsbB-like protein [Helicobacter suis HS1]
gi|321149005|gb|EFX43465.1| DsbB-like protein [Helicobacter suis HS1]
Length = 567
Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60
I + LF L G+K ++ ++M+L + + + H L G+++ +F +H W
Sbjct: 49 IALSGLFILRYGLKPKYIALMLLIIVGGLYQSFYHLGNHALEDVGQGFALTIFRLHTQFW 108
Query: 61 SLIFSLVIILFISVLML----FDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
+ + + L + L+ F+T + + A +F L+ +N + + G
Sbjct: 109 AELVFWLAALVLGSLLFFAPNFNTQDHPRQLTRSNRWAFAIFSALVASNMLQAFISTGPF 168
Query: 117 QCF--DNPTFY 125
NP +
Sbjct: 169 PYLGHGNPIRF 179
>gi|261839577|gb|ACX99342.1| DsbB-like protein [Helicobacter pylori 52]
Length = 490
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSPVR---EIAIYLFVFLIFANFISTILECGLT 116
W+L +++ ++VL+ F P+ + A Y+F ++ +N + G
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTPLFKNYPLNTLQKSAFYIFFIVVGSNAVQAFFSTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|163844533|ref|YP_001622188.1| hypothetical protein BSUIS_B0362 [Brucella suis ATCC 23445]
gi|163675256|gb|ABY39366.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 208
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127
Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFA----NFISTI 110
WS++ +L +I +V M+F ++ PV + + A N S
Sbjct: 128 WSILIALALIAAFAVQMMFWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 188 VQCGVGQC 195
>gi|254720565|ref|ZP_05182376.1| Frizzled protein [Brucella sp. 83/13]
gi|306838068|ref|ZP_07470925.1| Frizzled protein [Brucella sp. NF 2653]
gi|306406805|gb|EFM63027.1| Frizzled protein [Brucella sp. NF 2653]
Length = 208
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 68 VCFGIMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSPVRE--------IAIYLFVFLIF-ANFISTI 110
WS++ +L +I +V M+ + +++ + L+V + N S
Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTITQIKKYPVINGLGTILALYVLAVATINMASVF 187
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 188 VQCGVGQC 195
>gi|302206945|gb|ADL11287.1| Disulfide bond formation protein DsbB [Corynebacterium
pseudotuberculosis C231]
gi|308277199|gb|ADO27098.1| Disulfide bond formation protein DsbB [Corynebacterium
pseudotuberculosis I19]
Length = 496
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 15/140 (10%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG +F L G + R+ ++L A R G+ V G+H YT
Sbjct: 51 LIGALGVFILRYGARMRYVVTLLLVAFYYLYTTVRHWGGRANADLGQGFGDAVLGVHTYT 110
Query: 60 WSLIFSLVIILFISVLML-----------FDTAEIKVAK-SPVREIAIYLFVFLIFANFI 107
W ++ V+I +++ ++ F ++E++V K SP + + + + AN +
Sbjct: 111 WGILVYWVVIGVLAIGLIFIGKDKMLQKEFTSSELEVKKFSPATKFVAIVAIVITCANCV 170
Query: 108 STILECG--LTQCFDNPTFY 125
++ G +P +
Sbjct: 171 QFLIGNGIPPYAGAGDPARF 190
>gi|315586720|gb|ADU41101.1| DsbB family protein [Helicobacter pylori 35A]
Length = 489
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 58/131 (44%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYEGFYYTGSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
W+L +++F++VL+ F + + +++ A Y+F ++ +N + + G
Sbjct: 111 WALFVFFSVVVFLAVLLFFAPNTPLFKDYSLNTLQKSAFYIFFIVVGSNAVQAFISTGPF 170
Query: 117 QCF--DNPTFY 125
NP +
Sbjct: 171 PYVGQSNPVRF 181
>gi|265985598|ref|ZP_06098333.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|264664190|gb|EEZ34451.1| conserved hypothetical protein [Brucella sp. 83/13]
Length = 203
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 63 VCFGIMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 122
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSPVRE--------IAIYLFVFLIF-ANFISTI 110
WS++ +L +I +V M+ + +++ + L+V + N S
Sbjct: 123 WSILIALALIAAFAVQMMVWGGRHGQTITQIKKYPVINGLGTILALYVLAVATINMASVF 182
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 183 VQCGVGQC 190
>gi|254779412|ref|YP_003057517.1| putative disulfide oxidoreductase B (DsbB-like protein); putative
membrane protein [Helicobacter pylori B38]
gi|254001323|emb|CAX29308.1| Putative disulfide oxidoreductase B (DsbB-like protein); putative
membrane protein [Helicobacter pylori B38]
Length = 490
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLT 116
W+L ++ +++L+ F + +++ A Y+F ++ +N + + G
Sbjct: 111 WALFVFFSVVALLALLLFFAPNAQPFKDRLLNALQKSAFYVFFIVVGSNAVQAFVSTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|23500110|ref|NP_699550.1| disulfide bond formation protein DsbB [Brucella suis 1330]
gi|161620429|ref|YP_001594315.1| disulfide bond formation protein DsbB [Brucella canis ATCC 23365]
gi|254702754|ref|ZP_05164582.1| disulfide bond formation protein DsbB [Brucella suis bv. 3 str.
686]
gi|23463704|gb|AAN33555.1| disulfide bond formation protein DsbB, putative [Brucella suis
1330]
gi|161337240|gb|ABX63544.1| disulfide bond formation protein DsbB [Brucella canis ATCC 23365]
Length = 208
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127
Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFA----NFISTI 110
WS++ +L +I +V M+F ++ PV + + A N S
Sbjct: 128 WSILIALALIAAFAVQMMFWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 188 VQCGVGQC 195
>gi|260568339|ref|ZP_05838808.1| frizzled protein [Brucella suis bv. 4 str. 40]
gi|261753349|ref|ZP_05997058.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|260155004|gb|EEW90085.1| frizzled protein [Brucella suis bv. 4 str. 40]
gi|261743102|gb|EEY31028.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 203
Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 63 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 122
Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFA----NFISTI 110
WS++ +L +I +V M+F ++ PV + + A N S
Sbjct: 123 WSILIALALIAAFAVQMMFWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 182
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 183 VQCGVGQC 190
>gi|332673607|gb|AEE70424.1| DsbB family protein [Helicobacter pylori 83]
Length = 489
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + H L G+++P+ G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMAGSGLYEGFYYTGSHALEDVGQGFALPILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGL- 115
W+L +++F++VL+ F + +++ A Y+F ++ +N + + G
Sbjct: 111 WALFVFFSVVVFLAVLLFFAPNTQLFKNYSLNTLQKSAFYIFFIVVGSNAVQAFISTGPL 170
Query: 116 ---TQCFDNPTFY 125
Q NP +
Sbjct: 171 PYIGQ--SNPVRF 181
>gi|308049255|ref|YP_003912821.1| disulfide bond formation protein DsbB [Ferrimonas balearica DSM
9799]
gi|307631445|gb|ADN75747.1| Disulfide bond formation protein DsbB [Ferrimonas balearica DSM
9799]
Length = 486
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
++ + LF G+K ++ +++L AI R HIL G+ +FG+H Y
Sbjct: 55 LVSLIALFITRYGLKPKYIGLLLLTAIYGLFAGYRHSSAHILRDIGQGFGPAIFGVHTYV 114
Query: 60 WSLIFSLVIILFISVL-------MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILE 112
W ++ LV++LF VL ++ T + + + + A +F+ +I N + +
Sbjct: 115 WVMVVFLVVLLFAGVLLLLQGDKLVQWTEKTRWE--GLNKAAANVFLVVIAFNIVQAFSQ 172
Query: 113 CGLTQCF--DNPTF 124
G +P
Sbjct: 173 TGPAPFLGQGDPVR 186
>gi|317179041|dbj|BAJ56829.1| DsbB-like protein [Helicobacter pylori F30]
Length = 489
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + H L G+++P+ G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYEGFYYTGSHALEDIGQGFALPILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLT 116
W+L +++F+ VL+ F + +++ A Y+F ++ +N + + G
Sbjct: 111 WALFVFFSVVVFLGVLLFFAPNTQLFKNYSLNTLQKSAFYIFFIVVGSNAVQAFISTGPF 170
Query: 117 Q 117
Sbjct: 171 P 171
>gi|254699631|ref|ZP_05161459.1| Frizzled protein [Brucella suis bv. 5 str. 513]
gi|261750095|ref|ZP_05993804.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261739848|gb|EEY27774.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
Length = 203
Score = 58.3 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127
Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFA----NFISTI 110
WS++ +L +I +V M+ ++ PV + + A N S
Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 188 VQCGVGQC 195
>gi|188527557|ref|YP_001910244.1| DsbB-like protein [Helicobacter pylori Shi470]
gi|188143797|gb|ACD48214.1| DsbB-like protein [Helicobacter pylori Shi470]
Length = 490
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSPVR---EIAIYLFVFLIFANFISTILECGLT 116
W+L +++ ++VL+ F P+ + A Y+F ++ +N + G
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNAQLFKDYPLNTLQKSAFYVFFIVVGSNAVQAFFSTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|317181910|dbj|BAJ59694.1| DsbB-like protein [Helicobacter pylori F57]
Length = 490
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLT 116
W+L +++ ++VL+ F + +++ A Y+F ++ +N + G
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTPLFKNYSLNTLQKSAFYIFFIVVGSNAVQAFFSTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|306845651|ref|ZP_07478220.1| Frizzled protein [Brucella sp. BO1]
gi|306273972|gb|EFM55799.1| Frizzled protein [Brucella sp. BO1]
Length = 208
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 68 VCFGIMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSPVRE--------IAIYLFVFLIF-ANFISTI 110
WS++ +L +I +V M+ A + ++ + L+V I N S
Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQAIAQIKNYPVINGLGTILALYVLAIATINMASVF 187
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 188 VQCGVGQC 195
>gi|254695467|ref|ZP_05157295.1| Frizzled protein [Brucella abortus bv. 3 str. Tulya]
Length = 208
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127
Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFA----NFISTI 110
WS++ +L +I +V M+ ++ PV + + A N S
Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 188 VQCGVGQC 195
>gi|62317726|ref|YP_223579.1| disulfide bond formation protein DsbB [Brucella abortus bv. 1 str.
9-941]
gi|189022981|ref|YP_001932722.1| Frizzled protein [Brucella abortus S19]
gi|254691229|ref|ZP_05154483.1| Frizzled protein [Brucella abortus bv. 6 str. 870]
gi|254699016|ref|ZP_05160844.1| Frizzled protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254732463|ref|ZP_05191041.1| Frizzled protein [Brucella abortus bv. 4 str. 292]
gi|256256416|ref|ZP_05461952.1| Frizzled protein [Brucella abortus bv. 9 str. C68]
gi|297249776|ref|ZP_06933477.1| frizzled protein [Brucella abortus bv. 5 str. B3196]
gi|62197919|gb|AAX76218.1| hypothetical DsbB, disulfide bond formation protein [Brucella
abortus bv. 1 str. 9-941]
gi|189021555|gb|ACD74276.1| Frizzled protein [Brucella abortus S19]
gi|297173645|gb|EFH33009.1| frizzled protein [Brucella abortus bv. 5 str. B3196]
Length = 208
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127
Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFA----NFISTI 110
WS++ +L +I +V M+ ++ PV + + A N S
Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 188 VQCGVGQC 195
>gi|256015139|ref|YP_003105148.1| disulfide bond formation protein DsbB [Brucella microti CCM 4915]
gi|256059423|ref|ZP_05449625.1| Frizzled protein [Brucella neotomae 5K33]
gi|256111726|ref|ZP_05452710.1| Frizzled protein [Brucella melitensis bv. 3 str. Ether]
gi|294853352|ref|ZP_06794024.1| frizzled protein [Brucella sp. NVSL 07-0026]
gi|255997799|gb|ACU49486.1| disulfide bond formation protein DsbB [Brucella microti CCM 4915]
gi|294819007|gb|EFG36007.1| frizzled protein [Brucella sp. NVSL 07-0026]
Length = 208
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127
Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFA----NFISTI 110
WS++ +L +I +V M+ ++ PV + + A N S
Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 188 VQCGVGQC 195
>gi|110633609|ref|YP_673817.1| disulfide bond formation protein DsbB, putative [Mesorhizobium sp.
BNC1]
gi|110284593|gb|ABG62652.1| disulfide bond formation protein DsbB, putative [Chelativorans sp.
BNC1]
Length = 215
Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + +G R+ +L + +++ RQ L+ I P G VFG+H+
Sbjct: 69 VCFGIMQQFRNGFSVRNTGFSLLFTVFLLVVSVRQTLLDIYPRPGHEYIGSAVFGLHMPV 128
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSPVR--------EIAIYLFVFLI-FANFISTI 110
WS++ +L +++ + ++F + + + ++ + A+ L+V LI NF S +
Sbjct: 129 WSVLIALALLIAFTFELIFWSGKNHMHEARLTGLPVIRGLATALSLYVILIGLVNFGSVV 188
Query: 111 LECGLTQC 118
L+CG+ +C
Sbjct: 189 LQCGVGEC 196
>gi|261215853|ref|ZP_05930134.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260917460|gb|EEX84321.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
Length = 203
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 63 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 122
Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFA----NFISTI 110
WS++ +L +I +V M+ ++ PV + + A N S
Sbjct: 123 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 182
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 183 VQCGVGQC 190
>gi|261323389|ref|ZP_05962586.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|265993198|ref|ZP_06105755.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|261299369|gb|EEY02866.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|262764068|gb|EEZ10100.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
Length = 203
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 63 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 122
Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFA----NFISTI 110
WS++ +L +I +V M+ ++ PV + + A N S
Sbjct: 123 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 182
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 183 VQCGVGQC 190
>gi|306840813|ref|ZP_07473560.1| Frizzled protein [Brucella sp. BO2]
gi|306289208|gb|EFM60457.1| Frizzled protein [Brucella sp. BO2]
Length = 208
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 68 VCFGIMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSPVRE--------IAIYLFVFLIF-ANFISTI 110
WS++ +L +I +V M+ + ++ + L+V + N S
Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTITQIKNHPVINGLGTILALYVLAVATINMASVF 187
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 188 VQCGVGQC 195
>gi|260544967|ref|ZP_05820788.1| frizzled protein [Brucella abortus NCTC 8038]
gi|260756832|ref|ZP_05869180.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260760263|ref|ZP_05872611.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260763502|ref|ZP_05875834.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260882648|ref|ZP_05894262.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260098238|gb|EEW82112.1| frizzled protein [Brucella abortus NCTC 8038]
gi|260670581|gb|EEX57521.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260673923|gb|EEX60744.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260676940|gb|EEX63761.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260872176|gb|EEX79245.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
Length = 203
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 63 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 122
Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFA----NFISTI 110
WS++ +L +I +V M+ ++ PV + + A N S
Sbjct: 123 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 182
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 183 VQCGVGQC 190
>gi|15645220|ref|NP_207390.1| hypothetical protein HP0595 [Helicobacter pylori 26695]
gi|2313718|gb|AAD07664.1| predicted coding region HP0595 [Helicobacter pylori 26695]
Length = 490
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKS---PVREIAIYLFVFLIFANFISTILECGLT 116
W+L +++ ++VL+ F +++IA Y+F ++ +N + + G
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNAQPFKDHSLNALQKIAFYVFFMVVGSNAVQAFISTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|148558668|ref|YP_001257372.1| putative disulfide bond formation protein DsbB [Brucella ovis ATCC
25840]
gi|148369953|gb|ABQ62825.1| putative disulfide bond formation protein DsbB [Brucella ovis ATCC
25840]
Length = 208
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127
Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFA----NFISTI 110
WS++ +L +I +V M+ ++ PV + + A N S
Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 188 VQCGVGQC 195
>gi|317180366|dbj|BAJ58152.1| DsbB-like protein [Helicobacter pylori F32]
Length = 490
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++ A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLFMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLT 116
W+L +++ ++VL+ F + +++ A Y+F ++ +N + G
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTQLFKDDSLNTLQKSAFYIFFIVVGSNAVQAFFSTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|225628802|ref|ZP_03786836.1| Frizzled protein [Brucella ceti str. Cudo]
gi|254711589|ref|ZP_05173400.1| Frizzled protein [Brucella pinnipedialis B2/94]
gi|254712186|ref|ZP_05173997.1| Frizzled protein [Brucella ceti M644/93/1]
gi|254715256|ref|ZP_05177067.1| Frizzled protein [Brucella ceti M13/05/1]
gi|256029775|ref|ZP_05443389.1| Frizzled protein [Brucella pinnipedialis M292/94/1]
gi|256157948|ref|ZP_05455866.1| Frizzled protein [Brucella ceti M490/95/1]
gi|256253093|ref|ZP_05458629.1| Frizzled protein [Brucella ceti B1/94]
gi|260167119|ref|ZP_05753930.1| Frizzled protein [Brucella sp. F5/99]
gi|261756518|ref|ZP_06000227.1| frizzled protein [Brucella sp. F5/99]
gi|225616648|gb|EEH13696.1| Frizzled protein [Brucella ceti str. Cudo]
gi|261736502|gb|EEY24498.1| frizzled protein [Brucella sp. F5/99]
Length = 203
Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 16/128 (12%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHIL--PGDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I PG VFG+H+
Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127
Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFA----NFISTI 110
WS ++I +V M+ ++ PV + + A N S
Sbjct: 128 WS-----ILIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 182
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 183 VQCGVGQC 190
>gi|312881155|ref|ZP_07740953.1| hypothetical protein VIBC2010_08138 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309371047|gb|EFP98501.1| hypothetical protein VIBC2010_08138 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 90
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP 43
M+ GFL N+ G QRHY +++LGA+ A RQ+ +H++P
Sbjct: 48 MVMFGFLLNVKYGPTQRHYGVILLGALFGAATALRQISLHVIP 90
>gi|317010816|gb|ADU84563.1| hypothetical protein HPSA_02780 [Helicobacter pylori SouthAfrica7]
Length = 490
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLT 116
W+L +++ +++L+ F + +++ A +F ++ +N I + G
Sbjct: 111 WALFVFFSVVVLLALLLFFAPNTQPFKDRLLNALQKSAFCVFFIVVGSNAIQAFVSTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|308061927|gb|ADO03815.1| DsbB-like protein [Helicobacter pylori Cuz20]
Length = 490
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
W+L +++ ++VL+ F + + +++ A Y+F ++ +N + G
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTQLFKDYSLNTLQKSAFYVFFIVVGSNAVQAFFSTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|261216982|ref|ZP_05931263.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261220196|ref|ZP_05934477.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261319212|ref|ZP_05958409.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261319852|ref|ZP_05959049.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|265986787|ref|ZP_06099344.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265996457|ref|ZP_06109014.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260918780|gb|EEX85433.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260922071|gb|EEX88639.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261292542|gb|EEX96038.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261298435|gb|EEY01932.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|262550754|gb|EEZ06915.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264658984|gb|EEZ29245.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 198
Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 16/128 (12%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHIL--PGDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I PG VFG+H+
Sbjct: 63 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 122
Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFA----NFISTI 110
WS ++I +V M+ ++ PV + + A N S
Sbjct: 123 WS-----ILIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 177
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 178 VQCGVGQC 185
>gi|326410532|gb|ADZ67596.1| Frizzled protein [Brucella melitensis M28]
gi|326553823|gb|ADZ88462.1| Frizzled protein [Brucella melitensis M5-90]
Length = 177
Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 37 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 96
Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFA----NFISTI 110
WS++ +L +I +V M+ ++ PV + + A N S
Sbjct: 97 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 156
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 157 VQCGVGQC 164
>gi|265999159|ref|ZP_05465215.2| disulfide bond formation protein DsbB [Brucella melitensis bv. 2
str. 63/9]
gi|263092468|gb|EEZ16721.1| disulfide bond formation protein DsbB [Brucella melitensis bv. 2
str. 63/9]
Length = 180
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 40 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 99
Query: 60 WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFA----NFISTI 110
WS++ +L +I +V M+ ++ PV + + A N S
Sbjct: 100 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 159
Query: 111 LECGLTQC 118
++CG+ QC
Sbjct: 160 VQCGVGQC 167
>gi|210134796|ref|YP_002301235.1| dsbb-like protein [Helicobacter pylori P12]
gi|210132764|gb|ACJ07755.1| dsbb-like protein [Helicobacter pylori P12]
Length = 490
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 54/131 (41%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++ A + + H L G++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLFMASSGLYESFYHTGSHALEDVGQGFAFAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSPVR---EIAIYLFVFLIFANFISTILECGLT 116
W+L +++ ++VL+ F P+ + A Y+F ++ +N + + G
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTQLFKDYPLNALQKSAFYVFFMVVGSNAVQAFISTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|261838162|gb|ACX97928.1| DsbB-like protein [Helicobacter pylori 51]
Length = 490
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++ A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLFMAGSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLT 116
W+L +++ ++VL+ F + +++ A Y+F ++ +N + G
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTQLFKNYSLNTLQKSAFYVFFIVVGSNAVQAFFSTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|300859255|ref|YP_003784238.1| hypothetical protein cpfrc_01838 [Corynebacterium
pseudotuberculosis FRC41]
gi|300686709|gb|ADK29631.1| putative membrane protein [Corynebacterium pseudotuberculosis
FRC41]
Length = 376
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 15/140 (10%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG +F L G + R+ ++L A R G+ V G+H YT
Sbjct: 51 LIGALGVFILRYGARMRYVVTLLLVAFYYLYTTVRHWGGRANADLGQGFGDAVLGVHTYT 110
Query: 60 WSLIFSLVIILFISVLML-----------FDTAEIKVAK-SPVREIAIYLFVFLIFANFI 107
W ++ V+I +++ ++ F ++E++V K SP + + + + AN +
Sbjct: 111 WGILVYWVVIGVLAIGLIFIGKDKMLQKEFTSSELEVKKFSPATKFVAIVAIVITCANCV 170
Query: 108 STILECG--LTQCFDNPTFY 125
++ G +P +
Sbjct: 171 QFLIGNGIPPYAGAGDPARF 190
>gi|38234617|ref|NP_940384.1| hypothetical protein DIP2060 [Corynebacterium diphtheriae NCTC
13129]
gi|38200881|emb|CAE50586.1| Putative membrane protein [Corynebacterium diphtheriae]
Length = 476
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 50/140 (35%), Gaps = 15/140 (10%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG +F L G + R+ ++L A R G+ V G+H YT
Sbjct: 51 LIGALGVFILRYGARMRYIVTLLLVAFYYLYTTVRHWGGRASADLGQGFGDAVLGVHTYT 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKS------------PVREIAIYLFVFLIFANFI 107
W ++ V+I +++ ++F + + + P + + + +N +
Sbjct: 111 WGILVYWVVIGVLAIGLIFIGKDKALQQEFISSEAVVKDFGPATRFVAIVAIVITCSNCV 170
Query: 108 STILECG--LTQCFDNPTFY 125
+ G +P +
Sbjct: 171 QFLFGNGIPPYAGAGDPARF 190
>gi|308184378|ref|YP_003928511.1| putative disulfide oxidoreductase B (DsbB-like protein); putative
membrane protein [Helicobacter pylori SJM180]
gi|308060298|gb|ADO02194.1| putative disulfide oxidoreductase B (DsbB-like protein); putative
membrane protein [Helicobacter pylori SJM180]
Length = 490
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLT 116
W+L +++ ++VL+ F + +++ A Y+F ++ +N + + G
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTQPFKVRLLNTLQKSAFYVFFMVVGSNAVQAFISTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|167625924|ref|YP_001676218.1| disulfide bond formation protein DsbB [Shewanella halifaxensis
HAW-EB4]
gi|167355946|gb|ABZ78559.1| Disulphide bond formation protein DsbB [Shewanella halifaxensis
HAW-EB4]
Length = 478
Score = 55.6 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+I + L+++ G+K ++ + ++ + +A I++ G+S+ + G H YT
Sbjct: 50 LIALTALYSVRYGLKPKYIAALVWLGVYGAFMAAVHTSINLGSDIGQGFSLKIMGAHTYT 109
Query: 60 WSLIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILEC 113
W+L +++++ +++LM D A K A P+ + A +F+ +I N + +
Sbjct: 110 WALFVFVMVLVVVALLMFTLGNKFPDNAYGKKALDPLPKYAFIVFLVVIAGNIVQAFTQT 169
Query: 114 GL 115
G
Sbjct: 170 GP 171
>gi|317014016|gb|ADU81452.1| hypothetical protein HPGAM_03060 [Helicobacter pylori Gambia94/24]
Length = 490
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGGHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLT 116
W+L +++ ++VL+ F + +++ A Y+F ++ +N I + G
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNAQPFKDRLLNTLQKSAFYVFFIVVGSNAIQAFVSTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|308063615|gb|ADO05502.1| DsbB-like protein [Helicobacter pylori Sat464]
Length = 490
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 58/131 (44%), Gaps = 6/131 (4%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + + H L G+++ + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
W+L +++ ++VL+ F + + + +++ A Y+F ++ +N + G
Sbjct: 111 WALFVFFSVVVLLAVLLFFASNTQLFKDYSLNTLQKSAFYVFFIVVGSNAVQAFFSTGPF 170
Query: 117 QC--FDNPTFY 125
+P +
Sbjct: 171 PYIGQSDPVRF 181
>gi|319941675|ref|ZP_08015998.1| disulfide bond formation protein [Sutterella wadsworthensis
3_1_45B]
gi|319804796|gb|EFW01658.1| disulfide bond formation protein [Sutterella wadsworthensis
3_1_45B]
Length = 511
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 44/116 (37%), Gaps = 11/116 (9%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60
IG+ LF + G K ++ + M++ A + R + H G+ + + G+H W
Sbjct: 64 IGVVALFMVRYGFKPKYLATMLVMAAVGLWSSFRHLGNHAARDVGQGFGLEIMGLHTQMW 123
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVRE----------IAIYLFVFLIFANF 106
+ I +++ + + + + IA + F++ +N
Sbjct: 124 AEIVFWCVVMLFGLALFLAPRFDALIAEFKGKRWRPTTGFMQIAFGIVSFILASNA 179
>gi|33595870|ref|NP_883513.1| hypothetical protein BPP1197 [Bordetella parapertussis 12822]
gi|33600400|ref|NP_887960.1| hypothetical protein BB1414 [Bordetella bronchiseptica RB50]
gi|33565949|emb|CAE36499.1| putative membrane protein [Bordetella parapertussis]
gi|33567999|emb|CAE31912.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 159
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 12/107 (11%)
Query: 9 NLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVI 68
N+ G HY++++ A+ A Q+L P + P G W+ + +
Sbjct: 61 NVRMGPSPLHYAMVLAPALGGLAAAGWQLL---SPEAGAAAPPWQG-----WAFLLFGAM 112
Query: 69 ILFISVLMLFDTAEIKVA-KSPV---REIAIYLFVFLIFANFISTIL 111
+++ ++++ D A K PV + + LF+ + AN T+L
Sbjct: 113 LVYCTLMLAADRKWGDNALKKPVALPGALVMGLFLVAVLANAAGTVL 159
>gi|89073636|ref|ZP_01160158.1| putative ATP /GTP binding protein [Photobacterium sp. SKA34]
gi|89050663|gb|EAR56149.1| putative ATP /GTP binding protein [Photobacterium sp. SKA34]
Length = 382
Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 47 GYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAEIKVAKSPVR-----EIAIYLFVFL 101
G+ + G H YTW ++ + +L +S+L+ F + + ++ + + Y F+ +
Sbjct: 10 GFGGLILGAHAYTWGVLLFIANLLIMSLLLGFSNEDTLKNTTQIQWGNFHKFSGYSFIIV 69
Query: 102 IFANFISTILECGL 115
IF N I + G
Sbjct: 70 IFLNVIQAFTQVGP 83
>gi|308049207|ref|YP_003912773.1| disulfide bond formation protein DsbB [Ferrimonas balearica DSM
9799]
gi|307631397|gb|ADN75699.1| Disulfide bond formation protein DsbB [Ferrimonas balearica DSM
9799]
Length = 487
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
++ + L+ + G+K ++ ++ I +A+ I++ G+S+ + G H YT
Sbjct: 52 LVALTALYIVRFGLKPKYIGALVWLGIYGAWMASVHTSINLGSDIGQGFSVKIMGAHTYT 111
Query: 60 WSLIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILEC 113
W+L+ +V+++ ++ LM+F + ++ +F+F+I N + +
Sbjct: 112 WALLVFVVVLVVVAALMMFLGNRFPGKPTQTPGNPALVKVVASVFLFVISGNIVQAFTQT 171
Query: 114 GL 115
G
Sbjct: 172 GP 173
>gi|114045799|ref|YP_736349.1| disulfide bond formation protein DsbB [Shewanella sp. MR-7]
gi|113887241|gb|ABI41292.1| Disulphide bond formation protein DsbB [Shewanella sp. MR-7]
Length = 478
Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
++ + L+ + G+K ++ + ++ I +A+ I++ G+S+ + G H YT
Sbjct: 50 LVALTALYIVRFGLKPKYIAALVWLGIYGAFMASVHTSINLGSDIGQGFSLKIMGAHTYT 109
Query: 60 WSLIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILEC 113
W+L +V+++ +++LML K + +IA +F+ +I N + +
Sbjct: 110 WALFVFVVVLIVVALLMLTLGNKFPSNGYGKQPLDTLPKIACGVFLVVISGNIVQAFTQT 169
Query: 114 GL 115
G
Sbjct: 170 GP 171
>gi|113971986|ref|YP_735779.1| disulfide bond formation protein DsbB [Shewanella sp. MR-4]
gi|113886670|gb|ABI40722.1| Disulphide bond formation protein DsbB [Shewanella sp. MR-4]
Length = 478
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
++ + L+ + G+K ++ + ++ I +A+ I++ G+S+ + G H YT
Sbjct: 50 LVALTALYIVRFGLKPKYIAALVWLGIYGAFMASVHTSINLGSDIGQGFSLKIMGAHTYT 109
Query: 60 WSLIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILEC 113
W+L +V+++ +++LML K + +IA +F+ +I N + +
Sbjct: 110 WALFVFVVVLIVVALLMLTLGNKFPSNGYGKQPLDTLPKIACGVFLVVISGNIVQAFTQT 169
Query: 114 GL 115
G
Sbjct: 170 GP 171
>gi|90578768|ref|ZP_01234578.1| hypothetical protein VAS14_03663 [Vibrio angustum S14]
gi|90439601|gb|EAS64782.1| hypothetical protein VAS14_03663 [Vibrio angustum S14]
Length = 386
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 36 QVLIHILPGDL-GYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAEIKVAKSPVR--- 91
+HI G+ + G H YTW + + +L +S+L+ F + + VR
Sbjct: 2 HSSVHIGQDIGQGFGGLILGAHAYTWGVFLFIANLLIMSLLIGFSNEDSLKNTTRVRWGT 61
Query: 92 --EIAIYLFVFLIFANFISTILECGL 115
+++ Y F+ +I N I + G
Sbjct: 62 FHKVSGYSFIIVISLNVIQAFTQVGP 87
>gi|308182757|ref|YP_003926884.1| DsbB-like protein [Helicobacter pylori PeCan4]
gi|308064942|gb|ADO06834.1| DsbB-like protein [Helicobacter pylori PeCan4]
Length = 489
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG L + G K ++ ++++L A + V H L G++I + G+H
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMAGSGLYEGFYYVGSHALEDVGQGFAIAILGLHTQF 110
Query: 60 WSLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
W+L +++ ++VL+ F + + +++ A Y+F ++ +N + + G
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTQLFKDYSLNTLQKSAFYVFFIVVGSNAVQAFISTGPF 170
Query: 117 Q 117
Sbjct: 171 P 171
>gi|222824339|ref|YP_002575913.1| disulfide bond formation protein, DsbB family [Campylobacter lari
RM2100]
gi|222539560|gb|ACM64661.1| disulfide bond formation protein, DsbB family [Campylobacter lari
RM2100]
Length = 528
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 46/124 (37%), Gaps = 13/124 (10%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
+IG+ + L G + ++ + L A + R G + G H YT
Sbjct: 56 IIGVLGMLILRYGPQIKYIVCVFLFAGYGIYMGIRHTASWWQRDIGIGLGDKLVGAHTYT 115
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAK------------SPVREIAIYLFVFLIFANFI 107
W+++ +++ + + +LF + + + ++ I L ++ +N
Sbjct: 116 WAVVVYWCVVVVMGLALLFIRKNSSMMQDLVNEKISVKPLNGYSKLVIILSFIVVCSNAF 175
Query: 108 STIL 111
++
Sbjct: 176 QALI 179
>gi|17989236|ref|NP_541869.1| disulfide bond formation protein B [Brucella melitensis bv. 1 str.
16M]
gi|256043270|ref|ZP_05446207.1| disulfide bond formation protein B [Brucella melitensis bv. 1 str.
Rev.1]
gi|260564479|ref|ZP_05834964.1| frizzled protein [Brucella melitensis bv. 1 str. 16M]
gi|265989697|ref|ZP_06102254.1| disulfide bond formation protein DsbB [Brucella melitensis bv. 1
str. Rev.1]
gi|17985096|gb|AAL54133.1| disulfide bond formation protein b [Brucella melitensis bv. 1 str.
16M]
gi|260152122|gb|EEW87215.1| frizzled protein [Brucella melitensis bv. 1 str. 16M]
gi|263000366|gb|EEZ13056.1| disulfide bond formation protein DsbB [Brucella melitensis bv. 1
str. Rev.1]
Length = 242
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I P G VFG+H+
Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127
Query: 60 WSLIFSLVIILFISVLMLFDTA----EIKVAKSPVREIAIYLFVF 100
WS++ +L +I +V M+ I K+ + + L+
Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNLRSSMVLALYWL 172
>gi|315452684|ref|YP_004072954.1| disulfide bond formation protein [Helicobacter felis ATCC 49179]
gi|315131736|emb|CBY82364.1| disulfide bond formation protein [Helicobacter felis ATCC 49179]
Length = 573
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 19/143 (13%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60
IG+ LF L G+K ++ +I++L + H L G+++ + G+H W
Sbjct: 52 IGLAGLFILRYGLKPKYLAILLLIVAGGLYQSFYHYGNHALEDVGQGFALSILGLHTQFW 111
Query: 61 SLIFSLVIILFISVLMLFDTA------EIKVAKSPVREI----------AIYLFVFLIFA 104
+ + ++L + L+LF + E V R A + +
Sbjct: 112 AHVVFWFVVLILGGLLLFAPSFQVLAQEGGVYAHGSRRTYRDLTKANNWAFLIVGVIAIT 171
Query: 105 NFISTILECGLTQCF--DNPTFY 125
N + + G +P +
Sbjct: 172 NMVQAFISTGPFPYLGQGDPIRF 194
>gi|254706112|ref|ZP_05167940.1| disulfide bond formation protein DsbB [Brucella pinnipedialis
M163/99/10]
Length = 130
Score = 41.3 bits (96), Expect = 0.049, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 2 IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHIL--PGDLGYSIPVFGMHLYT 59
+ G + L G R I +L AI II+ RQ L+ I PG VFG+H+
Sbjct: 68 VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127
Query: 60 WSL 62
WS+
Sbjct: 128 WSI 130
>gi|300313812|ref|YP_003777904.1| hypothetical protein Hsero_4530 [Herbaspirillum seropedicae SmR1]
gi|300076597|gb|ADJ65996.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 195
Score = 40.6 bits (94), Expect = 0.079, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G+GF+ NL G+K HY + +LGA+ T +IA RQ+ + + L + +F L+
Sbjct: 59 LTGMGFMKNLCQGVKSAHYGVALLGALLTGLIALRQLWMQPVAAMLSQPVCLFAA-LFAL 117
Query: 61 SLIFSLVIILFI------SVLMLFDTAEIKVAKSPV---REIAIYLFVFLIFANFISTIL 111
I + +L + L+L TAE K V R + +F+ + +++
Sbjct: 118 VAIIVIACLLGVKSAEYPGTLLLLQTAEATDEKHGVPWGRILVCAVFIATVAVTLSGSMI 177
Query: 112 ECGLTQC 118
C C
Sbjct: 178 NCTSATC 184
>gi|311746218|ref|ZP_07720003.1| cytochrome c oxidase, Cbb3-type, subunit I/II [Algoriphagus sp.
PR1]
gi|126576448|gb|EAZ80726.1| cytochrome c oxidase, Cbb3-type, subunit I/II [Algoriphagus sp.
PR1]
Length = 710
Score = 37.5 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 3/98 (3%)
Query: 14 IKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFIS 73
I+ H + +I + I A + L ++ + H Y W LI ++ I+
Sbjct: 58 IRPLHTNAVIFAFVGNAIFAGVYYSMPRLLKTPMWNKTLSWFHFYGWQLI---ILAAAIT 114
Query: 74 VLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111
+ + T++ +IAI L AN I T++
Sbjct: 115 LPLGLTTSKEYAELEWPIDIAIALVWVAFGANMIGTLI 152
>gi|146300292|ref|YP_001194883.1| cytochrome c oxidase, cbb3-type, subunit I [Flavobacterium
johnsoniae UW101]
gi|146154710|gb|ABQ05564.1| cytochrome c oxidase, cbb3-type, subunit I [Flavobacterium
johnsoniae UW101]
Length = 727
Score = 37.5 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Query: 14 IKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFIS 73
++ H + +I + A + L +S + +H + W LI ++ I+
Sbjct: 55 LRPLHTNAVIFAFVGNAFFAGMYYSMQRLLKARMFSDFLSNLHFWGWQLI---IVAAAIT 111
Query: 74 VLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111
+ + + +++ +IAI L ++ N I T+L
Sbjct: 112 LPLGYTSSKEYAELEWPIDIAIALIWVVMGINMIGTML 149
>gi|253569302|ref|ZP_04846712.1| two-component system sensor histidine kinase/response regulator
[Bacteroides sp. 1_1_6]
gi|251841321|gb|EES69402.1| two-component system sensor histidine kinase/response regulator
[Bacteroides sp. 1_1_6]
Length = 1338
Score = 37.1 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 32/87 (36%), Gaps = 14/87 (16%)
Query: 9 NLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVI 68
NL G HY + A + + + ++ + I Y L W+ +++
Sbjct: 748 NLRYG----HYIFRVKAANSNGVWNSNEISLSIQILPPFY--------LSVWAYCIYVLL 795
Query: 69 ILFISV--LMLFDTAEIKVAKSPVREI 93
I+ SV ++ F + + + +
Sbjct: 796 IIGCSVYLVLYFKRRTNRKHRRQMEKF 822
>gi|29348332|ref|NP_811835.1| two-component system sensor histidine kinase/response regulator
[Bacteroides thetaiotaomicron VPI-5482]
gi|29340236|gb|AAO78029.1| two-component system sensor histidine kinase/response regulator,
hybrid (one-component system) [Bacteroides
thetaiotaomicron VPI-5482]
Length = 1338
Score = 37.1 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 32/87 (36%), Gaps = 14/87 (16%)
Query: 9 NLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVI 68
NL G HY + A + + + ++ + I Y L W+ +++
Sbjct: 748 NLRYG----HYIFRVKAANSNGVWNSNEISLSIQILPPFY--------LSVWAYCIYVLL 795
Query: 69 ILFISV--LMLFDTAEIKVAKSPVREI 93
I+ SV ++ F + + + +
Sbjct: 796 IIGCSVYLVLYFKRRTNRKHRRQMEKF 822
>gi|255039060|ref|YP_003089681.1| putative bifunctional cbb3-type cytochrome c oxidase subunit I/II
[Dyadobacter fermentans DSM 18053]
gi|254951816|gb|ACT96516.1| cytochrome c oxidase, cbb3-type, subunit I [Dyadobacter fermentans
DSM 18053]
Length = 701
Score = 36.7 bits (84), Expect = 0.99, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 33/98 (33%), Gaps = 3/98 (3%)
Query: 14 IKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFIS 73
I+ H + +I + + + +S + H + W I I S
Sbjct: 53 IRPLHTNAVIFAFVGNGFFTGLYYSVPRVLRTPIWSPALSRFHFWAWQAIILGAAI---S 109
Query: 74 VLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111
+ M F T++ +IAI + N I T +
Sbjct: 110 LPMGFTTSKEYAELEWPFDIAIAVVWVSALVNIIMTTI 147
>gi|254446681|ref|ZP_05060156.1| hypothetical protein VDG1235_29 [Verrucomicrobiae bacterium DG1235]
gi|198256106|gb|EDY80415.1| hypothetical protein VDG1235_29 [Verrucomicrobiae bacterium DG1235]
Length = 305
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 51 PVFGMHLYTWSLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTI 110
FG+ T + S++ + FI ++ I++AKSP I + +F ++ + +
Sbjct: 174 AFFGLRFLTLFFVASILAMAFIEKDLILAANAIQMAKSPF--IIVAVFDLIVVVTLLLQV 231
Query: 111 LE 112
E
Sbjct: 232 TE 233
>gi|321472581|gb|EFX83550.1| hypothetical protein DAPPUDRAFT_315330 [Daphnia pulex]
Length = 393
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 60 WSLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFAN 105
W L + I+ I+VL+ + E A+ VR +A+ L + + N
Sbjct: 338 WILFLFALSIILIAVLLFLNYDEGN-ARPWVRRLALALLIISVITN 382
>gi|150025228|ref|YP_001296054.1| cytochrome c oxidase, cbb3-type, subunit I and II [Flavobacterium
psychrophilum JIP02/86]
gi|149771769|emb|CAL43243.1| Cytochrome c oxidase, cbb3-type, subunit I and II [Flavobacterium
psychrophilum JIP02/86]
Length = 726
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Query: 14 IKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFIS 73
++ H + +I + A + L YS + +H + W LI ++ IS
Sbjct: 55 LRPLHTNAVIFAFVGNAFFAGMYYSMQRLLKTRMYSDFLSNLHFWGWQLI---IVAAAIS 111
Query: 74 VLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111
+ + + T++ +IAI L ++ N I +++
Sbjct: 112 LPLGYSTSKEYAELEWPIDIAITLIWVVMGINMIGSMI 149
>gi|255534312|ref|YP_003094683.1| Cytochrome c oxidase subunit CcoN [Flavobacteriaceae bacterium
3519-10]
gi|255340508|gb|ACU06621.1| Cytochrome c oxidase subunit CcoN [Flavobacteriaceae bacterium
3519-10]
Length = 763
Score = 34.4 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Query: 14 IKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFIS 73
I+ H S +I + A + L YS + +H + W L+ V+I F
Sbjct: 82 IRMLHTSAVIFAFVCNGFFAGAYYSLQRLLKTRMYSDTLSWIHFWGWQLMIVSVVITF-- 139
Query: 74 VLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111
LM +T++ +I I + + N TI+
Sbjct: 140 -LMGINTSKEYAEHEWPIDILITVIWVIFGINMFGTII 176
>gi|300775350|ref|ZP_07085212.1| cytochrome c oxidase [Chryseobacterium gleum ATCC 35910]
gi|300506090|gb|EFK37226.1| cytochrome c oxidase [Chryseobacterium gleum ATCC 35910]
Length = 753
Score = 34.4 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 3/97 (3%)
Query: 14 IKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFIS 73
I+ H + +I + + + L YS + +H +TW +++ FI+
Sbjct: 78 IRMLHTNTVIFAFVCNIVYTGIYYSLQRLLKTRMYSDTLSWLHFWTWQ---FMIVATFIT 134
Query: 74 VLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTI 110
M +T++ +I I + N TI
Sbjct: 135 FFMGINTSKEYAEHEWPIDILIAFSWIIFGINMFLTI 171
>gi|297726469|ref|NP_001175598.1| Os08g0441200 [Oryza sativa Japonica Group]
gi|42408696|dbj|BAD09915.1| unknown protein [Oryza sativa Japonica Group]
gi|42408698|dbj|BAD09917.1| unknown protein [Oryza sativa Japonica Group]
gi|255678479|dbj|BAH94326.1| Os08g0441200 [Oryza sativa Japonica Group]
Length = 64
Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 5/62 (8%)
Query: 6 FLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP-----GDLGYSIPVFGMHLYTW 60
L G K R L ++ + + + G G+ FGM YTW
Sbjct: 2 LLLLQRGGDKARQRGTSSLSCTAGLGVSPIRAMSSLTEDKEEEGGDGFGDSYFGMSYYTW 61
Query: 61 SL 62
+L
Sbjct: 62 AL 63
>gi|294628720|ref|ZP_06707280.1| integral membrane transporter [Streptomyces sp. e14]
gi|292832053|gb|EFF90402.1| integral membrane transporter [Streptomyces sp. e14]
Length = 352
Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 19/122 (15%)
Query: 3 GIGFLFNLISGIKQRHYSIMILGAITTCIIATRQ-------------VLIHILPGDLGYS 49
+GF + G + Y ++ A+ I+A R + I+ G+
Sbjct: 102 AMGFHGVIEFGNRMLTY--VLCAAVGWAIVAARSEKPWRRALTRLGWLQFWIVMGNAVLG 159
Query: 50 I--PVFGMHLYTWS--LIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFAN 105
+ G++ YT + + S +I +V+ + V + L FL+ A+
Sbjct: 160 GIVVLVGLNPYTVAAHFLLSTALIAVAAVMWQRTREGDAEPRPLVGKAVQQLVWFLVVAS 219
Query: 106 FI 107
+
Sbjct: 220 VL 221
>gi|254444600|ref|ZP_05058076.1| hypothetical protein VDG1235_2840 [Verrucomicrobiae bacterium
DG1235]
gi|198258908|gb|EDY83216.1| hypothetical protein VDG1235_2840 [Verrucomicrobiae bacterium
DG1235]
Length = 963
Score = 34.0 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 35/112 (31%), Gaps = 8/112 (7%)
Query: 1 MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
+ G + H+ IL + HI P + + YT
Sbjct: 450 VAGFCLSLKDSLQQRSSHW--TILAIVWATFALLYIYAPHISPDHP------WRIRRYTP 501
Query: 61 SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILE 112
+I + +S+ + + + + I I +F+ L FA + E
Sbjct: 502 IIIPGFCLFAGVSINWIINRYTPRASPFATSLIGISIFIGLTFAALRPIVFE 553
>gi|308807381|ref|XP_003081001.1| G protein-coupled seven transmembrane receptor (ISS) [Ostreococcus
tauri]
gi|116059463|emb|CAL55170.1| G protein-coupled seven transmembrane receptor (ISS) [Ostreococcus
tauri]
Length = 932
Score = 34.0 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Query: 13 GIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFI 72
G+++ H+ ++ L + T + + HI S + + Y +++ S+++ I
Sbjct: 209 GVRKIHWLMLALVSFKTLSVLAQAGRYHITRLTG--SSKGWTVAYYIFTVCRSMLLFSVI 266
Query: 73 SVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL-ECGL 115
+++ + + + + + + + AN S ++ E G
Sbjct: 267 ALVGMGWSFLKPFLHQREKNLLMAVIPLQVMANIASVVVGEEGP 310
>gi|241949667|ref|XP_002417556.1| cyclopropane-fatty-acyl-phospholipid synthase, putative [Candida
dubliniensis CD36]
gi|223640894|emb|CAX45211.1| cyclopropane-fatty-acyl-phospholipid synthase, putative [Candida
dubliniensis CD36]
Length = 513
Score = 34.0 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Query: 29 TCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVII----LFISVLMLFDTAEIK 84
+ +L+ IL GY G+ TW F ++ I + S++ F +
Sbjct: 44 GSTSFSNTILLSILALVPGYITYKLGLGFKTWVFFFLVLAIPILMAYWSIMSTFSPRINE 103
Query: 85 VAKSPVREIAIYL 97
K P R I+ YL
Sbjct: 104 KVKYPNRPISYYL 116
>gi|332662009|ref|YP_004444797.1| cytochrome c oxidase, cbb3-type, subunit I [Haliscomenobacter
hydrossis DSM 1100]
gi|332330823|gb|AEE47924.1| cytochrome c oxidase, cbb3-type, subunit I [Haliscomenobacter
hydrossis DSM 1100]
Length = 710
Score = 34.0 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Query: 14 IKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFIS 73
I+ H + I + I + L +S + +H + W LI +++ ++
Sbjct: 56 IRPLHTNAAIFAFVGNGIFMGVYYSLQRLLKTRMFSNTLSNIHFWGWQLI---IVLAAVT 112
Query: 74 VLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111
+ + +++ +IAI L + N TI+
Sbjct: 113 LPLGITSSKEYAELEWPIDIAIALVWVVFGINMFGTII 150
>gi|86607810|ref|YP_476572.1| hypothetical protein CYB_0311 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556352|gb|ABD01309.1| hypothetical protein CYB_0311 [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 591
Score = 33.6 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 63 IFSLVIILFISVLMLFDTAEIKVAKSPVR-EIAIYLFVFLIFANFIS 108
+ + ++ I V + D KV + +R ++ YLF FLI AN +S
Sbjct: 49 LGFTLSVVAIVVQLSADRFTPKVTELFLREKVNFYLFFFLILANVVS 95
>gi|126663940|ref|ZP_01734935.1| cytochrome c oxidase, cbb3-type [Flavobacteria bacterium BAL38]
gi|126624204|gb|EAZ94897.1| cytochrome c oxidase, cbb3-type [Flavobacteria bacterium BAL38]
Length = 723
Score = 33.6 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
Query: 14 IKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFIS 73
++ H + +I + + A + L S + +H + W LI ++ IS
Sbjct: 55 LRPLHTNAVIFAFVGNAMFAGVYYSMQRLLKTRMLSDFLSKVHFWGWQLI---IVAAAIS 111
Query: 74 VLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111
+ + + T++ +IAI L + N I TI+
Sbjct: 112 LPLGYSTSKEYAELEWPIDIAIALIWVVFGINMIGTII 149
>gi|270308523|ref|YP_003330581.1| hypothetical protein DhcVS_1139 [Dehalococcoides sp. VS]
gi|270154415|gb|ACZ62253.1| hypothetical protein DhcVS_1139 [Dehalococcoides sp. VS]
Length = 191
Score = 33.6 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%)
Query: 59 TWSLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILE 112
+W+L+ +II+ + L + E IA+ N I+T E
Sbjct: 7 SWALLAFGLIIIAGASLFILFKNEDSRKTDLEDRIALAELAIPNVVNSIATTTE 60
>gi|212637699|ref|YP_002314224.1| formate dehydrogenase subunit gamma [Shewanella piezotolerans WP3]
gi|212559183|gb|ACJ31637.1| Formate dehydrogenase, gamma subunit [Shewanella piezotolerans WP3]
Length = 327
Score = 33.6 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 29/145 (20%)
Query: 2 IGIGFLFNLISGIKQRH----YSIMILGAITTCIIATRQV-------LIHILPGDLGYSI 50
IG G NL+ KQ H MI A+ T + A Q+ + ++ G + +
Sbjct: 152 IGEGLWSNLVYAAKQVHDIMAIPFMIGWALMTVLWAKNQLPKMYDLKWMMVVGGYINFG- 210
Query: 51 PVFGMH-----------LYTWSLIFSLVIILFISVLMLFDTAEIKVAKSPV------REI 93
P G H L+ W+ ++I +L+LF +
Sbjct: 211 PFKGKHPDAGFANAGEKLWFWAFAVFGLVISASGMLLLFPNLFEPSRTLSLIALVLHSVS 270
Query: 94 AIYLFVFLIFANFISTILECGLTQC 118
AI + F I F++T++ G +C
Sbjct: 271 AIIITAFSIVHIFMATVMSEGGMEC 295
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.321 0.161 0.523
Lambda K H
0.267 0.0490 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,765,006,226
Number of Sequences: 14124377
Number of extensions: 110895880
Number of successful extensions: 775279
Number of sequences better than 10.0: 881
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 720
Number of HSP's that attempted gapping in prelim test: 774025
Number of HSP's gapped (non-prelim): 1298
length of query: 129
length of database: 4,842,793,630
effective HSP length: 95
effective length of query: 34
effective length of database: 3,500,977,815
effective search space: 119033245710
effective search space used: 119033245710
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (20.7 bits)
S2: 76 (33.6 bits)