BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780338|ref|YP_003064751.1| hypothetical protein
CLIBASIA_01115 [Candidatus Liberibacter asiaticus str. psy62]
         (129 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|148974191|ref|ZP_01811724.1| hypothetical protein VSWAT3_13727 [Vibrionales bacterium SWAT-3]
 gi|145965888|gb|EDK31136.1| hypothetical protein VSWAT3_13727 [Vibrionales bacterium SWAT-3]
          Length = 179

 Score =  163 bits (412), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 49/132 (37%), Positives = 77/132 (58%), Gaps = 3/132 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           M+  GF+ N++ G + RHY I+++GA+     + RQV +H++PG  GY  P+FGMH YTW
Sbjct: 48  MVAFGFMLNVVYGPQPRHYGIVLIGALYGVATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107

Query: 61  SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
           + +     IL ++V+++    E        S +  +A  L + ++  N I+T +ECG  Q
Sbjct: 108 AFVLFAATILAVAVILILTNKEPSQEAYKMSNLGRVACLLAIVVVALNAIATFVECGPYQ 167

Query: 118 CFDNPTFYQLLN 129
           C DNP  Y LLN
Sbjct: 168 CPDNPVSYWLLN 179


>gi|330445116|ref|ZP_08308768.1| putative membrane protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489307|dbj|GAA03265.1| putative membrane protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 182

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 3/132 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           M+  GF+ N++ G +QRHY ++++GA+     A RQV +H++PG  G+  P+ GMH YTW
Sbjct: 48  MVMFGFMLNVVYGTQQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107

Query: 61  SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
           + +   + I  +++L++    +        +   +    L +  +  N +ST LECG  Q
Sbjct: 108 AFVIFGMTIAGVALLLMLWNKDWTSENYQMNKFGKFVCILAIVAVLINVVSTFLECGPYQ 167

Query: 118 CFDNPTFYQLLN 129
           C DNP  Y LL+
Sbjct: 168 CPDNPVSYWLLD 179


>gi|269962996|ref|ZP_06177333.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832239|gb|EEZ86361.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 179

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 3/132 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           MI  GFL N++ G + RHY ++++GA+     + RQV +H++PG  GY  P+FGMH YTW
Sbjct: 48  MIMFGFLLNVVYGPRSRHYGVVLIGALYGVATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107

Query: 61  SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
           + +  +  I  ++V+++  + E        S +  I   L + ++  N I T  ECG  Q
Sbjct: 108 AFVLFVATIFAVAVILMLTSKEESPEPYEMSNLGRITCLLAISVVALNVIGTFAECGPYQ 167

Query: 118 CFDNPTFYQLLN 129
           C DNP  Y L N
Sbjct: 168 CPDNPESYWLFN 179


>gi|84386571|ref|ZP_00989598.1| hypothetical protein V12B01_17856 [Vibrio splendidus 12B01]
 gi|84378676|gb|EAP95532.1| hypothetical protein V12B01_17856 [Vibrio splendidus 12B01]
          Length = 183

 Score =  160 bits (405), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 3/132 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           M+  GF+ N++ G + RHY ++++GA+     + RQV +H++PG  GY  P+ GMH YTW
Sbjct: 48  MVAFGFMLNVVYGPQSRHYGVILIGALYGVATSLRQVSLHVIPGTPGYGSPILGMHYYTW 107

Query: 61  SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
           + +  +  IL +SV+++                  I   L + ++  N I+T +ECG  Q
Sbjct: 108 AFVLFVATILAVSVILMLTNKTESHEPYKMGNFGRIVCLLAIAVVALNAIATFVECGPYQ 167

Query: 118 CFDNPTFYQLLN 129
           C DNP  Y LLN
Sbjct: 168 CPDNPVSYWLLN 179


>gi|90580939|ref|ZP_01236740.1| hypothetical protein VAS14_20796 [Vibrio angustum S14]
 gi|90437817|gb|EAS63007.1| hypothetical protein VAS14_20796 [Vibrio angustum S14]
          Length = 182

 Score =  158 bits (400), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 74/132 (56%), Gaps = 3/132 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           M+  GF+ N++ G +QRHY ++++GA+     A RQV +H++PG  G+  P+ GMH YTW
Sbjct: 48  MVMFGFMLNVVYGTQQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107

Query: 61  SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
           + +   + I  +++L+L    E        +   +    L +  +  N IST LECG  Q
Sbjct: 108 AFVIFAMAIAGVALLLLLWNKEWTSENYQMNKFGKFVCILAIVAVLINVISTFLECGPYQ 167

Query: 118 CFDNPTFYQLLN 129
           C DNP  Y LL+
Sbjct: 168 CPDNPVSYWLLD 179


>gi|89076419|ref|ZP_01162744.1| hypothetical protein SKA34_21524 [Photobacterium sp. SKA34]
 gi|89047887|gb|EAR53480.1| hypothetical protein SKA34_21524 [Photobacterium sp. SKA34]
          Length = 182

 Score =  158 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 3/132 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           M+  GF+ N++ G +QRHY ++++GA+     A RQV +H++PG  G+  P+ GMH YTW
Sbjct: 48  MVMFGFMLNVVYGTQQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107

Query: 61  SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
           + +   + I  +++L+L    E        +   +    L +  +  N IST +ECG  Q
Sbjct: 108 AFVIFAMAIAGVALLLLLWNKEWTSENYQMNKFGKFVCILAIVAVLINVISTFIECGPYQ 167

Query: 118 CFDNPTFYQLLN 129
           C DNP  Y LL+
Sbjct: 168 CPDNPVSYWLLD 179


>gi|153832246|ref|ZP_01984913.1| putative membrane protein [Vibrio harveyi HY01]
 gi|148871557|gb|EDL70412.1| putative membrane protein [Vibrio harveyi HY01]
          Length = 179

 Score =  158 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 3/132 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           MI  GFL N++ G + RHY ++++GA+     + RQV +H++PG  GY  P+FGMH YTW
Sbjct: 48  MIMFGFLLNVVYGPQSRHYGVVLIGALYGVATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107

Query: 61  SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
           + +  +  I  ++V+++    E        S +  I   L + ++  N I T  ECG  Q
Sbjct: 108 AFVLFVATIFAVAVILMLTNKEESSEPYEMSNLGRITCLLAISVVALNVIGTFAECGPYQ 167

Query: 118 CFDNPTFYQLLN 129
           C DNP  Y L N
Sbjct: 168 CPDNPESYWLFN 179


>gi|209809797|ref|YP_002265336.1| membrane protein [Aliivibrio salmonicida LFI1238]
 gi|208011360|emb|CAQ81816.1| membrane protein [Aliivibrio salmonicida LFI1238]
          Length = 182

 Score =  158 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 77/132 (58%), Gaps = 3/132 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           M+  GF+ N+I G +QRHY ++++GA+     A RQV +H++PG  G+  P+ GMH YTW
Sbjct: 48  MVMFGFMLNIIYGTQQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107

Query: 61  SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
           + +  ++ I+ ++VL++    +        +   + A  L +  +  N +ST +ECG  Q
Sbjct: 108 AFVIFMMAIVGVAVLLMLWNNDWSTDTYQMNAFGKFACVLAIVAVLVNVLSTFVECGPYQ 167

Query: 118 CFDNPTFYQLLN 129
           C DNP  Y LL+
Sbjct: 168 CPDNPVSYWLLD 179


>gi|149187374|ref|ZP_01865672.1| hypothetical protein VSAK1_17662 [Vibrio shilonii AK1]
 gi|148838910|gb|EDL55849.1| hypothetical protein VSAK1_17662 [Vibrio shilonii AK1]
          Length = 182

 Score =  157 bits (398), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 45/132 (34%), Positives = 75/132 (56%), Gaps = 3/132 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           M+  GFL N++ G +QRHY ++++GA+     A RQV +H++PG  G+  P+ GMH YTW
Sbjct: 48  MVMFGFLLNIVYGTEQRHYGVILVGALFGAATALRQVSLHVIPGTPGFGSPILGMHYYTW 107

Query: 61  SLIFSLVIILFISVLMLFDTA---EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
           + +   + I  +++L++       + +   S    +   L +  +  N +ST +ECG  Q
Sbjct: 108 AFVIFAMTIAGVALLLVLWNKDWSDDQYQMSMFGRVVCILAIVAVAINVLSTFIECGPYQ 167

Query: 118 CFDNPTFYQLLN 129
           C DNP  Y LL+
Sbjct: 168 CPDNPVSYWLLD 179


>gi|260779144|ref|ZP_05888036.1| putative inner membrane protein [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605308|gb|EEX31603.1| putative inner membrane protein [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 179

 Score =  157 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 3/132 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           M+  GFL N+  G +QRHY ++++GA+     A RQV +H++PG  GY   +FGMH YTW
Sbjct: 48  MVMFGFLLNVKYGPQQRHYGVVLIGALFGAATALRQVSLHVIPGTPGYGSAIFGMHYYTW 107

Query: 61  SLIFSLVIILFISVLMLFDT---AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
           + +     IL +++L++             S +      L + ++  N +ST +ECG  Q
Sbjct: 108 AFVLFSATILAVAILLMLWNEAWNTEPFEMSKIGRWVCLLAISVVALNMLSTFVECGPYQ 167

Query: 118 CFDNPTFYQLLN 129
           C DNP  Y L N
Sbjct: 168 CPDNPVSYWLFN 179


>gi|156977740|ref|YP_001448646.1| hypothetical protein VIBHAR_06528 [Vibrio harveyi ATCC BAA-1116]
 gi|156529334|gb|ABU74419.1| hypothetical protein VIBHAR_06528 [Vibrio harveyi ATCC BAA-1116]
          Length = 179

 Score =  157 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 74/132 (56%), Gaps = 3/132 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           MI  GFL N++ G + RHY ++++GA+     + RQV +H++PG  GY  P+FGMH YTW
Sbjct: 48  MIMFGFLLNVVYGPQSRHYGVVLIGALYGVATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107

Query: 61  SLIFSLVIILFISVLMLF---DTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
           + +  +  I  ++V+++    + +      S +  I   L + ++  N I T  ECG  Q
Sbjct: 108 AFVLFVATIFAVAVILMLTSREESPEPYEMSNLGRITCLLAISVVALNVIGTFAECGPYQ 167

Query: 118 CFDNPTFYQLLN 129
           C DNP  Y L N
Sbjct: 168 CPDNPESYWLFN 179


>gi|90580693|ref|ZP_01236497.1| hypothetical protein VAS14_16187 [Vibrio angustum S14]
 gi|90438150|gb|EAS63337.1| hypothetical protein VAS14_16187 [Vibrio angustum S14]
          Length = 179

 Score =  156 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 3/132 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           M+  GF+ N++ G + RHY ++++GA+     + RQV +H++PG  GY  P+FGMH YTW
Sbjct: 48  MVAFGFMLNVVYGPQSRHYGVVLIGALYGIATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKSP---VREIAIYLFVFLIFANFISTILECGLTQ 117
           + +   + I  ++V++L    +             I     + ++  N I+T +ECG  Q
Sbjct: 108 AFVLFAITIFGVAVILLLTNKDESHESYNITHFGRIVCVFAIVVVALNVIATFVECGPYQ 167

Query: 118 CFDNPTFYQLLN 129
           C DNP  Y L N
Sbjct: 168 CPDNPVSYWLFN 179


>gi|89072064|ref|ZP_01158660.1| hypothetical protein SKA34_08518 [Photobacterium sp. SKA34]
 gi|89052165|gb|EAR57616.1| hypothetical protein SKA34_08518 [Photobacterium sp. SKA34]
          Length = 179

 Score =  155 bits (393), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 3/132 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           M+  GF+ N++ G + RHY ++++GA+     + RQV +H++PG  GY  P+FGMH YTW
Sbjct: 48  MVAFGFMLNVVYGPQSRHYGVVLIGALYGIATSLRQVSLHVIPGTPGYGSPIFGMHYYTW 107

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKSP---VREIAIYLFVFLIFANFISTILECGLTQ 117
           + +   + +  ++V++L    +             I     + ++  N I+T +ECG  Q
Sbjct: 108 AFVLFAITVFGVAVILLLTNKDESHESYNITHFGRIVCVFAIVVVALNVIATFVECGPYQ 167

Query: 118 CFDNPTFYQLLN 129
           C DNP  Y L N
Sbjct: 168 CPDNPVSYWLFN 179


>gi|311108230|ref|YP_003981083.1| disulfide bond formation protein B [Achromobacter xylosoxidans A8]
 gi|310762919|gb|ADP18368.1| disulfide bond formation protein B [Achromobacter xylosoxidans A8]
          Length = 190

 Score =  154 bits (389), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 53/133 (39%), Positives = 74/133 (55%), Gaps = 4/133 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G+GFL N+  G    HY++ I GA+   + + RQVL+HI PGD GY  P+ G+H YTW
Sbjct: 53  LAGMGFLLNMRLGPSPLHYAMSIAGALGGLLASGRQVLLHIAPGDPGYGSPLLGLHFYTW 112

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKSP----VREIAIYLFVFLIFANFISTILECGLT 116
           + I  + II+F +V++  D              +  + + LF  +  AN  ST LECG  
Sbjct: 113 AFIAFIAIIVFCTVMLAVDRKWGDNMLRKPVSVLGVLVMALFFLMALANVGSTTLECGFG 172

Query: 117 QCFDNPTFYQLLN 129
            C DNPT YQ LN
Sbjct: 173 PCPDNPTSYQWLN 185


>gi|156977737|ref|YP_001448643.1| hypothetical protein VIBHAR_06525 [Vibrio harveyi ATCC BAA-1116]
 gi|156529331|gb|ABU74416.1| hypothetical protein VIBHAR_06525 [Vibrio harveyi ATCC BAA-1116]
          Length = 135

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/132 (31%), Positives = 75/132 (56%), Gaps = 3/132 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           MI  GFL N++ GI+Q+HY ++++GA+     + RQ+ +H++PG  G+   + GMH YTW
Sbjct: 1   MIMFGFLLNVVYGIEQKHYGVILIGALFGIATSLRQISLHVIPGTPGFGSAILGMHYYTW 60

Query: 61  SLIFSLVIILFISVLMLFDT---AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
           + +   + +  I++L++      +      SP+ +    L +  +  N IST +ECG  +
Sbjct: 61  AFVIFCMAVAGIALLLILWDDRYSNQNHEMSPLAKSVCILAIATVLINVISTFIECGPFE 120

Query: 118 CFDNPTFYQLLN 129
           C  +P  Y LL+
Sbjct: 121 CPADPVSYWLLD 132


>gi|163801305|ref|ZP_02195204.1| hypothetical protein 1103602000598_AND4_10569 [Vibrio sp. AND4]
 gi|159174794|gb|EDP59594.1| hypothetical protein AND4_10569 [Vibrio sp. AND4]
          Length = 135

 Score =  151 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 3/131 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           M+  GFL N++ G++Q+HY I+++GA+     + RQ+ +H++PG  G+  P+ GMH YTW
Sbjct: 1   MVMFGFLLNVVFGVEQKHYGIVLVGALFGVATSLRQISLHVIPGTPGFGSPILGMHYYTW 60

Query: 61  SLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
           + +   + I  +++L++    E        S   +    L +  +  N IST +ECG  +
Sbjct: 61  AFVIFCMAIAGVALLLILWNTEYSNKNYEMSTFGKSVCLLAIVAVLINVISTFVECGPFE 120

Query: 118 CFDNPTFYQLL 128
           C  +P  Y LL
Sbjct: 121 CPADPVSYWLL 131


>gi|163801307|ref|ZP_02195206.1| hypothetical protein 1103602000598_AND4_10579 [Vibrio sp. AND4]
 gi|159174796|gb|EDP59596.1| hypothetical protein AND4_10579 [Vibrio sp. AND4]
          Length = 179

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 3/132 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           MI  G L N++ G + RHY ++++GA+     + RQV +H++PG  GY  P+ GMH YTW
Sbjct: 48  MIMFGLLLNVVYGPQSRHYGVVLIGALYGVATSLRQVSLHVIPGTPGYGSPILGMHYYTW 107

Query: 61  SLIFSLVIILFISVLMLFDTA---EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
           + +  +  IL ++V+++             + +  ++  L + ++  N I T  ECG  Q
Sbjct: 108 AFVLFVTTILVVAVILMLTNKGESSAPYEMTSLGRVSCLLAISVVALNVIGTFAECGPYQ 167

Query: 118 CFDNPTFYQLLN 129
           C DNP  Y + N
Sbjct: 168 CPDNPESYWMFN 179


>gi|293607074|ref|ZP_06689417.1| inner protein [Achromobacter piechaudii ATCC 43553]
 gi|292814564|gb|EFF73702.1| inner protein [Achromobacter piechaudii ATCC 43553]
          Length = 190

 Score =  149 bits (376), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 49/132 (37%), Positives = 67/132 (50%), Gaps = 4/132 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G+GFL N+  G    HY + I  ++   + + RQVL+H+ PGD GY  P  GMH YTW
Sbjct: 53  LAGVGFLLNMRLGPSPMHYGMSIAASLGGMVASGRQVLLHLAPGDPGYGSPFLGMHFYTW 112

Query: 61  SLIFSLVIILFISVLMLFDTAEI----KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           + I    II+F  ++   D        K   S +  + + LF  +  AN  ST LECG  
Sbjct: 113 AFIAFGAIIVFCVLMQTADRKWGDSMLKKPVSALGILVMALFFVMTLANLGSTTLECGFG 172

Query: 117 QCFDNPTFYQLL 128
            C DNP  Y  L
Sbjct: 173 PCPDNPETYLWL 184


>gi|148978274|ref|ZP_01814792.1| hypothetical protein VSWAT3_15147 [Vibrionales bacterium SWAT-3]
 gi|145962575|gb|EDK27852.1| hypothetical protein VSWAT3_15147 [Vibrionales bacterium SWAT-3]
          Length = 129

 Score =  148 bits (373), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 3/124 (2%)

Query: 7   LFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSL 66
           + N++ G +QRHY I+++GA+     + RQ+ +H++PG  GY   +FGMH YTW+ I   
Sbjct: 1   MLNVVYGAEQRHYGIVLIGALFGAATSLRQISLHVIPGTPGYGSAIFGMHYYTWAFIIFG 60

Query: 67  VIILFISVLMLFDT---AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPT 123
           + I  +++L++         +   +   +    + +  +  N IST LECG  +C  +P 
Sbjct: 61  MTIFGVALLLMLWNNDCKTKEYQMTTFGKSVCIIAIITVLINVISTFLECGPYECPADPI 120

Query: 124 FYQL 127
            Y  
Sbjct: 121 SYWF 124


>gi|294141630|ref|YP_003557608.1| disulfide bond formation protein B [Shewanella violacea DSS12]
 gi|293328099|dbj|BAJ02830.1| disulfide bond formation protein B, putative [Shewanella violacea
           DSS12]
          Length = 182

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 6/134 (4%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           +  G L N++ G +  HY IM+ GA+    +A RQV +H++PG   Y  P    H YTW+
Sbjct: 49  VMFGLLCNVVYGPRTSHYGIMLFGALFGAAVALRQVSLHVIPGTPFYGDPFLSFHFYTWA 108

Query: 62  LIFSLVIILFISVLMLFDTAEIKVAKSPVR------EIAIYLFVFLIFANFISTILECGL 115
            I   VIIL  +V++ F +   +V    +       ++A+ + + +   N +ST  ECG 
Sbjct: 109 FITFAVIILGTAVMLSFSSQYKEVKHQTLGEMPLLSKLAVGIVLLVTLMNVLSTFAECGP 168

Query: 116 TQCFDNPTFYQLLN 129
            +C  +P  Y L +
Sbjct: 169 FECPADPVQYWLFS 182


>gi|163868988|ref|YP_001610218.1| disulfide bond formation protein B [Bartonella tribocorum CIP
           105476]
 gi|161018665|emb|CAK02223.1| disulfide bond formation protein B [Bartonella tribocorum CIP
           105476]
          Length = 193

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 4/133 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G GFL N+   +K  HY ++I+G + T  +A RQV +HI P DLGY    FG+H YTW
Sbjct: 54  LAGCGFLLNIHHKVKNTHYGMVIIGCMVTSAVAARQVFLHITPDDLGYGSTFFGLHFYTW 113

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAK----SPVREIAIYLFVFLIFANFISTILECGLT 116
           + I S++ I  ++ +M+      K  +      + + A +LFVFLI AN ISTILECG  
Sbjct: 114 AFIISVLCIFAVASVMILGELAHKFKEFSAFPILSKTASFLFVFLIAANLISTILECGGG 173

Query: 117 QCFDNPTFYQLLN 129
           QC D+P  Y+LL+
Sbjct: 174 QCADDPVRYELLS 186


>gi|170737007|ref|YP_001778267.1| hypothetical protein Bcenmc03_4643 [Burkholderia cenocepacia MC0-3]
 gi|169819195|gb|ACA93777.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3]
          Length = 195

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 53/131 (40%), Positives = 77/131 (58%), Gaps = 3/131 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + GIGF  N+  GI+  HY  +++ A+ T +IA RQVL+HI P    Y   ++G+H YTW
Sbjct: 59  LAGIGFAMNIRYGIRGTHYCCVLVSAVATGVIAGRQVLLHISPDSGAYGSALWGLHFYTW 118

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLTQ 117
             I S++IIL++S+L+        V     S    IA+ +F   I AN +ST+LECG  Q
Sbjct: 119 CFIASVLIILYVSLLLAVRRTNDTVQPASMSTSGRIAMAVFGLTIIANLVSTLLECGGGQ 178

Query: 118 CFDNPTFYQLL 128
           C  +P  Y+LL
Sbjct: 179 CASDPVEYELL 189


>gi|300724708|ref|YP_003714033.1| hypothetical protein XNC1_3917 [Xenorhabdus nematophila ATCC 19061]
 gi|297631250|emb|CBJ91945.1| conserved hypothetical protein; putative membrane protein
           [Xenorhabdus nematophila ATCC 19061]
          Length = 188

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 70/131 (53%), Positives = 86/131 (65%), Gaps = 3/131 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           MIG GFLFN+  GIK  HYS+ I G + T  +A RQV +HILPGD GY    FG+H YTW
Sbjct: 56  MIGFGFLFNIYFGIKNAHYSLSIFGCLVTGFVAMRQVSLHILPGDTGYGSTFFGLHFYTW 115

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLTQ 117
           + I S++ I+ I+V+M         AK     + +IA+ LF FLI AN +STILECG  Q
Sbjct: 116 AAILSILTIIAIAVIMPLKAGNTDSAKCTPPALGKIAMGLFAFLIAANLVSTILECGGGQ 175

Query: 118 CFDNPTFYQLL 128
           C DNPTFYQLL
Sbjct: 176 CDDNPTFYQLL 186


>gi|240851132|ref|YP_002972534.1| hypothetical membrane protein [Bartonella grahamii as4aup]
 gi|240268255|gb|ACS51843.1| hypothetical membrane protein [Bartonella grahamii as4aup]
          Length = 191

 Score =  143 bits (361), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 59/133 (44%), Positives = 81/133 (60%), Gaps = 4/133 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G GFL N+   +K  HY ++ILG + T  +A RQV +HI P DLGY    FG+H YTW
Sbjct: 54  LAGCGFLLNIHHKVKNTHYGMVILGCMVTSAVAARQVFLHITPDDLGYGSTFFGLHFYTW 113

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAK----SPVREIAIYLFVFLIFANFISTILECGLT 116
           + I S++ I  +S +M+      K  +      + + A +LFVFLI AN ISTILECG  
Sbjct: 114 AFIISVLCIFAVSFVMILGELAHKFKEFSPFPFLSKTASFLFVFLIAANLISTILECGGG 173

Query: 117 QCFDNPTFYQLLN 129
           QC D+P  Y+LL+
Sbjct: 174 QCADDPVRYELLS 186


>gi|37524258|ref|NP_927602.1| hypothetical protein plu0239 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36783681|emb|CAE12534.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 189

 Score =  143 bits (361), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 73/132 (55%), Positives = 91/132 (68%), Gaps = 4/132 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           MIG GFLFNL  GIK  HY + ++G + T I+A RQV +HI PGDLGY   +FG+H YTW
Sbjct: 56  MIGFGFLFNLCFGIKSAHYGLSLIGCVVTGIVAIRQVFLHITPGDLGYGSALFGIHFYTW 115

Query: 61  SLIFSLVIILFISVLMLFDT----AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           +LI S++ I+ ISV+++  +     E K   S + +I I LFV LI AN ISTILECG  
Sbjct: 116 ALICSVIAIIGISVMLILKSLEKTTEEKQKTSAIGQIIIGLFVILITANLISTILECGGG 175

Query: 117 QCFDNPTFYQLL 128
           QC DNPTFYQLL
Sbjct: 176 QCDDNPTFYQLL 187


>gi|90409260|ref|ZP_01217363.1| hypothetical protein PCNPT3_04227 [Psychromonas sp. CNPT3]
 gi|90309633|gb|EAS37815.1| hypothetical protein PCNPT3_04227 [Psychromonas sp. CNPT3]
          Length = 182

 Score =  142 bits (359), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 6/134 (4%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           +  G L N++ G +  HY IMI GA+    +A RQ+ +H++PG   Y  P F  H YTW+
Sbjct: 49  VLFGLLCNVVYGPRTSHYGIMIFGALFGAGVALRQISLHVIPGTPFYGDPFFSFHFYTWA 108

Query: 62  LIFSLVIILFISVLMLFDTAEIKVAKSPV------REIAIYLFVFLIFANFISTILECGL 115
            I  +VI+   +V++ F +   ++            ++AI L +F+   N +ST  ECG 
Sbjct: 109 FISFVVIVFGSAVMLSFSSQYKEIKYQTFVQMPVLSKVAIALVLFVTLLNVLSTFAECGP 168

Query: 116 TQCFDNPTFYQLLN 129
            +C  +P  Y L N
Sbjct: 169 FECPSDPIQYWLFN 182


>gi|317405865|gb|EFV86148.1| hypothetical protein HMPREF0005_02716 [Achromobacter xylosoxidans
           C54]
          Length = 190

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 4/132 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G+G L NL  G    HY++ I  ++   + + RQVL+HI PGD GY  P  G+H YTW
Sbjct: 53  LAGVGLLLNLRLGPSPMHYAMTIAASLGGMVASGRQVLLHIAPGDAGYGTPFLGLHFYTW 112

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKSP----VREIAIYLFVFLIFANFISTILECGLT 116
           + I    +I+F  +++  D              +  + + LF  ++ AN  ST L+CG  
Sbjct: 113 AFIAFGALIVFCVLMLSVDRKWGDNMLKRPVSVLGVVIMALFFIMVLANLGSTTLQCGFG 172

Query: 117 QCFDNPTFYQLL 128
            C DNP  Y  L
Sbjct: 173 PCPDNPAGYLWL 184


>gi|254780338|ref|YP_003064751.1| hypothetical protein CLIBASIA_01115 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040015|gb|ACT56811.1| hypothetical protein CLIBASIA_01115 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 129

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 129/129 (100%), Positives = 129/129 (100%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW
Sbjct: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFD 120
           SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFD
Sbjct: 61  SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFD 120

Query: 121 NPTFYQLLN 129
           NPTFYQLLN
Sbjct: 121 NPTFYQLLN 129


>gi|260434000|ref|ZP_05787971.1| hypothetical protein SL1157_3162 [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417828|gb|EEX11087.1| hypothetical protein SL1157_3162 [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 189

 Score =  141 bits (357), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/135 (32%), Positives = 81/135 (60%), Gaps = 7/135 (5%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           +G+G   NL+ G + +HY++M++ A+    ++ RQ+L+HI+PG   Y  PV G+H YTW+
Sbjct: 49  VGVGLGLNLLYGPRPQHYAMMLIAALYGGSVSVRQILLHIVPGTGHYGSPVLGLHYYTWA 108

Query: 62  LIFSLVIILFISVLMLFDTAEIKVAK-------SPVREIAIYLFVFLIFANFISTILECG 114
            I   +I+L  +++++FD   +   +       + + ++A ++ + L   N  ST+LECG
Sbjct: 109 AICFFLILLGTAIMLMFDRQYVDDRRAQPRFGGNRLAKVAFFIMLGLAVLNAGSTLLECG 168

Query: 115 LTQCFDNPTFYQLLN 129
              C D PT Y+L++
Sbjct: 169 PGVCADPPTDYKLID 183


>gi|254480095|ref|ZP_05093343.1| hypothetical protein GPB2148_3132 [marine gamma proteobacterium
           HTCC2148]
 gi|214039657|gb|EEB80316.1| hypothetical protein GPB2148_3132 [marine gamma proteobacterium
           HTCC2148]
          Length = 181

 Score =  141 bits (357), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           + IG L N+  G +  HY   I  ++    +A RQV +H++PG  GY  P  G+H YTW+
Sbjct: 47  VSIGLLLNVTHGPRPSHYGFAIAASVAGGAMALRQVSLHVIPGTPGYGSPFLGLHFYTWA 106

Query: 62  LIFSLVIILFISVLMLFDTAEIKVAKSPVR------EIAIYLFVFLIFANFISTILECGL 115
            +    +I  I+++         +     R      ++AI +   +I  N ++   ECG 
Sbjct: 107 FLLFAFMIAAIAMISSLPRQYDDLGWLQWRQQPLLCKLAIVVITIIISLNALAAFSECGP 166

Query: 116 TQCFDNPTFYQLL 128
             C DNP  Y L 
Sbjct: 167 GTCPDNPEQYWLF 179


>gi|290476875|ref|YP_003469786.1| hypothetical protein XBJ1_3906 [Xenorhabdus bovienii SS-2004]
 gi|289176219|emb|CBJ83024.1| conserved hypothetical protein; putative membrane protein
           [Xenorhabdus bovienii SS-2004]
          Length = 184

 Score =  141 bits (356), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 66/131 (50%), Positives = 87/131 (66%), Gaps = 3/131 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           MIG+GFLFN+  GIK  HYS+ +LG + T  IA RQV +HILPGD GY     G+H YTW
Sbjct: 52  MIGLGFLFNIYFGIKNAHYSLSLLGCLVTGFIAMRQVSLHILPGDTGYGSTFLGLHFYTW 111

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAK---SPVREIAIYLFVFLIFANFISTILECGLTQ 117
           + + S++ I+ I+V+M         ++     + +IA+ LF FLI AN +ST+LECG  Q
Sbjct: 112 AAVLSILTIIAIAVIMPLKAGNSDSSRYTPPTLGKIAMGLFAFLIAANLVSTVLECGSGQ 171

Query: 118 CFDNPTFYQLL 128
           C DNPTFYQLL
Sbjct: 172 CDDNPTFYQLL 182


>gi|170735271|ref|YP_001774385.1| hypothetical protein Bcenmc03_6778 [Burkholderia cenocepacia MC0-3]
 gi|169821309|gb|ACA95890.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3]
          Length = 195

 Score =  141 bits (356), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/131 (39%), Positives = 78/131 (59%), Gaps = 3/131 (2%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + GIGF  N+  GI+  HY  +++ A+ T +IA RQVL+HI P    Y   ++G+H YTW
Sbjct: 59  LAGIGFAMNVRYGIRGTHYCCVLVSAVATGVIAGRQVLLHISPDSGAYGSALWGLHFYTW 118

Query: 61  SLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
             I S++IIL++S+L+           V+ +    IA+ +F   I AN +ST+LECG  Q
Sbjct: 119 CFIASVLIILYVSLLLAVRRTSHTVQPVSMTTGGRIAMAVFGLTIIANLVSTLLECGGGQ 178

Query: 118 CFDNPTFYQLL 128
           C  +P  Y+LL
Sbjct: 179 CESDPVAYELL 189


>gi|49476082|ref|YP_034123.1| hypothetical protein BH14180 [Bartonella henselae str. Houston-1]
 gi|49238890|emb|CAF28183.1| hypothetical protein BH14180 [Bartonella henselae str. Houston-1]
          Length = 193

 Score =  141 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 58/133 (43%), Positives = 81/133 (60%), Gaps = 4/133 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G GFL N+   +K  HY ++ILG + T I+A RQV +HI P DLGY    FG+H YTW
Sbjct: 54  LAGCGFLLNIHHKVKNTHYGMVILGCMVTSIVAARQVFLHITPDDLGYGSTFFGLHFYTW 113

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAK----SPVREIAIYLFVFLIFANFISTILECGLT 116
           + I +++ I  ++ LM+      K         + ++A  LFVFLI AN IST+LECG  
Sbjct: 114 AFIIAVLCIFAVAFLMILSELSYKFKVFAPFPLLSKMASGLFVFLIAANLISTVLECGTG 173

Query: 117 QCFDNPTFYQLLN 129
           QC D+P  Y+LL+
Sbjct: 174 QCADDPVRYELLS 186


>gi|158422613|ref|YP_001523905.1| putative transmembrane protein [Azorhizobium caulinodans ORS 571]
 gi|158329502|dbj|BAF86987.1| putative transmembrane protein [Azorhizobium caulinodans ORS 571]
          Length = 185

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 48/133 (36%), Positives = 67/133 (50%), Gaps = 6/133 (4%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
              G   N+  G +  HY+I+IL A    +I+ RQ L+HI+PG   Y   + G+H Y+W+
Sbjct: 49  AAFGLALNVKFGPRPSHYAIVILSAFCGGLISGRQTLLHIVPGTGTYGDALLGLHFYSWA 108

Query: 62  LIFSLVIILFISVLMLFDTAEIKVAKS------PVREIAIYLFVFLIFANFISTILECGL 115
           L+   VIIL   +++LFD       +             + L   L F N  ST+LECG 
Sbjct: 109 LVLFCVIILGCGLMLLFDQQFAGDNRPLGPRAATFGLAMVVLGFLLAFGNGASTVLECGG 168

Query: 116 TQCFDNPTFYQLL 128
             C DNPT YQL 
Sbjct: 169 GLCPDNPTSYQLF 181


>gi|253987664|ref|YP_003039020.1| hypothetical protein PAU_00181 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211638571|emb|CAR67191.1| putative membrane protein [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253779114|emb|CAQ82274.1| putative membrane protein [Photorhabdus asymbiotica]
          Length = 189

 Score =  140 bits (353), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 71/132 (53%), Positives = 89/132 (67%), Gaps = 4/132 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           MIG GFLFNL  GIK  HY I ++G I T IIA RQV +HILPGD+GY   +FG+H YTW
Sbjct: 56  MIGFGFLFNLRFGIKSAHYGIALIGCIVTGIIAIRQVFLHILPGDIGYGSALFGIHFYTW 115

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKSP----VREIAIYLFVFLIFANFISTILECGLT 116
           +L+ S++ I+ ISV+++  + E    +        +I I  FV LI AN IST+LECG  
Sbjct: 116 ALLSSVIAIIAISVMLILKSLEKTTEEKGNTPVFGQILIGFFVLLITANLISTVLECGGG 175

Query: 117 QCFDNPTFYQLL 128
           QC DNPTFYQLL
Sbjct: 176 QCDDNPTFYQLL 187


>gi|49474631|ref|YP_032673.1| hypothetical protein BQ11210 [Bartonella quintana str. Toulouse]
 gi|49240135|emb|CAF26582.1| hypothetical protein BQ11210 [Bartonella quintana str. Toulouse]
          Length = 193

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/133 (40%), Positives = 81/133 (60%), Gaps = 4/133 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G GFLFN+   +K  HY ++ILG + T ++A RQV +HI P DLGY    FG+H YTW
Sbjct: 54  LAGCGFLFNIHHKVKNTHYGMVILGCMVTSVVAARQVFLHITPDDLGYGSTFFGLHFYTW 113

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116
           + + +++ I  ++ +M+      K         +   A +LF+FLI AN +ST+LECG  
Sbjct: 114 AFLIAVLCIFAVTFIMILSELAHKFKVFSPIPLLSGAASFLFIFLIAANLVSTVLECGGG 173

Query: 117 QCFDNPTFYQLLN 129
           QC D+P  Y+LL+
Sbjct: 174 QCADDPVRYELLS 186


>gi|238919044|ref|YP_002932558.1| hypothetical protein NT01EI_1112 [Edwardsiella ictaluri 93-146]
 gi|238868612|gb|ACR68323.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 189

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 63/132 (47%), Positives = 86/132 (65%), Gaps = 4/132 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           +IG GFLFN+  GIK  HY I ++G + T  IA RQ+ +HILPGD GY      +H YTW
Sbjct: 56  LIGFGFLFNVRFGIKGAHYGIALIGCVITGSIAARQMFLHILPGDSGYGSTFLELHFYTW 115

Query: 61  SLIFSLVIILFISVLMLF----DTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           +L+ S+++I+ I+V+M+      T    ++     +IAI LF  +I AN IST+LECG  
Sbjct: 116 ALLASIIVIVAIAVMMMLGEVRPTTGETISVPLWGKIAIALFALVIVANLISTVLECGGG 175

Query: 117 QCFDNPTFYQLL 128
           QC DNPTFYQL+
Sbjct: 176 QCADNPTFYQLI 187


>gi|300693183|ref|YP_003749156.1| hypothetical protein RPSI07_mp0150 [Ralstonia solanacearum PSI07]
 gi|299075220|emb|CBJ34509.1| conserved membrane protein of unknown function [Ralstonia
           solanacearum PSI07]
          Length = 183

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 6/133 (4%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
            G+G   NL  G +  HY++MIL ++   +IA RQ+L+HI+PG   Y   ++G+HLYT +
Sbjct: 49  AGVGLALNLRFGSRPAHYALMILASLAGAVIAGRQILLHIVPGTGTYGEALWGLHLYTLA 108

Query: 62  LIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGL 115
            I   V+I   +V++        D     V  S     A+ L   L   N + T LECG 
Sbjct: 109 FIAFSVMIAGTAVMLFLERSSEADEGPALVPPSRAALTAVVLLAVLTLGNVVGTFLECGG 168

Query: 116 TQCFDNPTFYQLL 128
             C D+P  Y+LL
Sbjct: 169 GMCADDPVIYELL 181


>gi|298293265|ref|YP_003695204.1| disulfide bond formation protein DsbB [Starkeya novella DSM 506]
 gi|296929776|gb|ADH90585.1| Disulfide bond formation protein DsbB [Starkeya novella DSM 506]
          Length = 199

 Score =  133 bits (335), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 4/131 (3%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           +G+G   NL  G +  HY+I IL A+   +I+TRQVL+HI+PG   +     G+H Y+W+
Sbjct: 58  VGLGLALNLRFGPRPSHYAIAILSAMAGGVISTRQVLLHIVPGSGTFGADFLGLHFYSWA 117

Query: 62  LIFSLVIILFISVLMLFDT----AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
           L+  +VI    +VL+LFD        +     +   A  L   L   N +ST+LEC    
Sbjct: 118 LVLFIVIAAGCAVLLLFDRQFAPGTARYRLGGLALAAFALIALLALGNGVSTVLECAGGL 177

Query: 118 CFDNPTFYQLL 128
           C DNPT YQLL
Sbjct: 178 CPDNPTTYQLL 188


>gi|332184421|gb|AEE26675.1| Putative inner membrane protein [Francisella cf. novicida 3523]
          Length = 189

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           IG GFL N+   I+  HY++ +L A+ T  ++ RQ+ +H+    +G+   V GMH+Y+W 
Sbjct: 53  IGFGFLLNMRYNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSRVLGMHMYSWV 111

Query: 62  LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109
            + S++ I++I+++M +        +              + +I   +F+ ++FAN  ST
Sbjct: 112 FVISMIAIIYIAIVMSYPRQYELRKRPQEISEAKNNIIRILTQIVFIIFLIVVFANVAST 171

Query: 110 ILECGLTQCFDNPTFY 125
             ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187


>gi|254374698|ref|ZP_04990179.1| hypothetical protein FTDG_00873 [Francisella novicida GA99-3548]
 gi|151572417|gb|EDN38071.1| hypothetical protein FTDG_00873 [Francisella novicida GA99-3548]
          Length = 194

 Score =  129 bits (326), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 13/136 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           IG GFL N+   I+  HY++ +L A+ T  ++ RQ+ +H+    +G+   V GMH+Y+W 
Sbjct: 58  IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 116

Query: 62  LIFSLVIILFISVLMLFDTAE------------IKVAKSPVREIAIYLFVFLIFANFIST 109
            + S+V I++I+++M +                         +I   +F+ ++FAN +ST
Sbjct: 117 FVISMVAIIYIAIVMSYPRQYELRRQPQQISEAKNNIMRLFIQIIFIIFLLVVFANVVST 176

Query: 110 ILECGLTQCFDNPTFY 125
             ECGL +C D+PT Y
Sbjct: 177 FFECGLHECPDDPTRY 192


>gi|62263489|gb|AAX78165.1| unknown protein [synthetic construct]
          Length = 224

 Score =  129 bits (326), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           IG GFL N+   I+  HY++ +L A+ T  ++ RQ+ +H+    +G+   V GMH+Y+W 
Sbjct: 79  IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 137

Query: 62  LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109
            + S++ I++I+++M +        +                +I   +F+ ++FAN +ST
Sbjct: 138 FVISMIAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 197

Query: 110 ILECGLTQCFDNPTFY 125
             ECGL +C D+PT Y
Sbjct: 198 FFECGLHECPDDPTRY 213


>gi|194323862|ref|ZP_03057638.1| hypothetical protein FTE_0697 [Francisella tularensis subsp.
           novicida FTE]
 gi|208779953|ref|ZP_03247297.1| hypothetical protein FTG_0700 [Francisella novicida FTG]
 gi|194322226|gb|EDX19708.1| hypothetical protein FTE_0697 [Francisella tularensis subsp.
           novicida FTE]
 gi|208744408|gb|EDZ90708.1| hypothetical protein FTG_0700 [Francisella novicida FTG]
          Length = 194

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 13/136 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           IG GFL N+   I+  HY++ +L A+ T  ++ RQ+ +H+    +G+   V GMH+Y+W 
Sbjct: 58  IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 116

Query: 62  LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109
            + S+V I++I+++M +        +                +I   +F+ ++FAN +ST
Sbjct: 117 FVISMVAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 176

Query: 110 ILECGLTQCFDNPTFY 125
             ECGL +C D+PT Y
Sbjct: 177 FFECGLHECPDDPTRY 192


>gi|254373241|ref|ZP_04988730.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151570968|gb|EDN36622.1| conserved hypothetical protein [Francisella novicida GA99-3549]
          Length = 194

 Score =  128 bits (322), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           IG GFL N+   I+  HY++ +L A+ T  ++ RQ+ +H+    +G+   V GMH+Y+W 
Sbjct: 58  IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 116

Query: 62  LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109
            + S++ I++I+++M +        +                +I   +F+ ++FAN +ST
Sbjct: 117 FVISMIAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 176

Query: 110 ILECGLTQCFDNPTFY 125
             ECGL +C D+PT Y
Sbjct: 177 FFECGLHECPDDPTRY 192


>gi|134301613|ref|YP_001121581.1| hypothetical protein FTW_0552 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134049390|gb|ABO46461.1| hypothetical protein FTW_0552 [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 194

 Score =  128 bits (322), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           IG GFL N+   I+  HY++ +L A+ T  ++ RQ+ +H+    +G+   V GMH+Y+W 
Sbjct: 58  IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 116

Query: 62  LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109
            + S++ I++I+++M +        +                +I   +F+ ++FAN +ST
Sbjct: 117 FVISMIAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 176

Query: 110 ILECGLTQCFDNPTFY 125
             ECGL +C D+PT Y
Sbjct: 177 FFECGLHECPDDPTRY 192


>gi|170701333|ref|ZP_02892296.1| putative transmembrane protein [Burkholderia ambifaria IOP40-10]
 gi|170133749|gb|EDT02114.1| putative transmembrane protein [Burkholderia ambifaria IOP40-10]
          Length = 201

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/140 (33%), Positives = 74/140 (52%), Gaps = 13/140 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
            G+G   NL  G++  HY+I++ GA+   +I+ RQ L+HI+PG   Y   + GMH+Y  +
Sbjct: 58  AGMGLALNLRFGMRPSHYAIILFGALLGGVISARQSLLHIVPGSGAYGREILGMHMYVAA 117

Query: 62  LIFSLVIILFISVLMLFD-------TAEIKVAKSPVRE------IAIYLFVFLIFANFIS 108
            +  + I++ ++ ++LFD        +E    + P R       +A+ LF  L   N +S
Sbjct: 118 FVGFVAIVVAVACMLLFDCQFLQRADSEAPAEQQPPRSLGGVSMVAVALFAVLTLGNAVS 177

Query: 109 TILECGLTQCFDNPTFYQLL 128
           T LECG   C  NP  Y LL
Sbjct: 178 TALECGAGLCVANPVSYLLL 197


>gi|283479837|emb|CAY75753.1| hypothetical protein EPYR_03373 [Erwinia pyrifoliae DSM 12163]
          Length = 211

 Score =  127 bits (321), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/124 (42%), Positives = 79/124 (63%), Gaps = 3/124 (2%)

Query: 8   FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67
           FNL  G ++ HY ++I+GA+    +ATR V +HI PGD GY +P  G+HLYTWSLI ++ 
Sbjct: 87  FNLYFGNRKLHYGMVIIGALALAAVATRHVFLHITPGDTGYGLPFLGIHLYTWSLILAVA 146

Query: 68  IILFISVLMLFDTAEIK---VAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124
           II+ ++V ++          V KS  +   + ++  ++ AN  ST+L+CG  QC DNPT+
Sbjct: 147 IIIGVAVTLMITPDAATAPVVIKSFTQRFLMIIYALILVANLSSTVLQCGGGQCDDNPTY 206

Query: 125 YQLL 128
           YQLL
Sbjct: 207 YQLL 210


>gi|332678603|gb|AEE87732.1| Putative inner membrane protein [Francisella cf. novicida Fx1]
          Length = 189

 Score =  127 bits (320), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 13/136 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           IG GFL N+   I+  HY++ +L A+ T  ++ RQ+ +H+    +G+   V GMH+Y+W 
Sbjct: 53  IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111

Query: 62  LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109
            + S+V I++I+++M +        +                +I   +F+ ++FAN +ST
Sbjct: 112 FVISMVAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171

Query: 110 ILECGLTQCFDNPTFY 125
             ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187


>gi|83747350|ref|ZP_00944390.1| Disulfide bond formation protein B [Ralstonia solanacearum UW551]
 gi|83725937|gb|EAP73075.1| Disulfide bond formation protein B [Ralstonia solanacearum UW551]
          Length = 188

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 11/138 (7%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           +G+G   NL  G +  HY++MIL ++   +IA RQVL+HI+PG   Y   ++G+HLYT +
Sbjct: 49  VGVGLALNLRFGARPAHYALMILASLGGAVIAGRQVLLHIVPGTGTYGEALWGLHLYTLA 108

Query: 62  LIFSLVIILFISVLMLFDT-----------AEIKVAKSPVREIAIYLFVFLIFANFISTI 110
            I   VII   +V++  +                   S     A+ L   L   N + T 
Sbjct: 109 FIAFSVIIAGTAVMLFLERLPEADEGTARLPREPSLTSRAALAAVALLTVLTLGNVVGTF 168

Query: 111 LECGLTQCFDNPTFYQLL 128
           LECG   C D+P  Y+LL
Sbjct: 169 LECGAGMCADDPVVYELL 186


>gi|145589498|ref|YP_001156095.1| hypothetical protein Pnuc_1317 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047904|gb|ABP34531.1| conserved hypothetical protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 187

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 69/125 (55%), Gaps = 1/125 (0%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           +IG   + N+  G    HY   ILG +    ++ RQV +HILPGD G+      +H YTW
Sbjct: 52  IIGFALVLNIRCGAHSAHYGWAILGGLVGMTVSLRQVFLHILPGDKGFGATFLELHFYTW 111

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFD 120
           + +  + ++   ++L++    E++ +++      + +F+ L+F N +ST+LECG   C D
Sbjct: 112 AFVGYMGLLAGQAILLMLPNREVR-SRTWFANALVIIFILLVFGNLLSTLLECGFGPCAD 170

Query: 121 NPTFY 125
           +P  Y
Sbjct: 171 DPVKY 175


>gi|207739629|ref|YP_002258022.1| hypothetical protein RSIPO_04330 [Ralstonia solanacearum IPO1609]
 gi|206593009|emb|CAQ59915.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
          Length = 172

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 11/138 (7%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           +G+G   NL  G +  HY++MIL ++   +IA RQVL+HI+PG   Y   ++G+HLYT +
Sbjct: 33  VGVGLALNLRFGARPAHYALMILASLGGAVIAGRQVLLHIVPGTGTYGEALWGLHLYTLA 92

Query: 62  LIFSLVIILFISVLMLFDT-----------AEIKVAKSPVREIAIYLFVFLIFANFISTI 110
            I   VII   +V++  +                   S     A+ L   L   N + T 
Sbjct: 93  FIAFSVIIAGTAVMLFLERLPEADEGTARLPREPSLTSRAALAAVALLTVLTLGNVVGTF 152

Query: 111 LECGLTQCFDNPTFYQLL 128
           LECG   C D+P  Y+LL
Sbjct: 153 LECGAGMCADDPVVYELL 170


>gi|292486979|ref|YP_003529849.1| hypothetical protein EAMY_0491 [Erwinia amylovora CFBP1430]
 gi|292900634|ref|YP_003540003.1| disulfide bond formation membrane protein [Erwinia amylovora ATCC
           49946]
 gi|291200482|emb|CBJ47611.1| putative disulfide bond formation membrane protein [Erwinia
           amylovora ATCC 49946]
 gi|291552396|emb|CBA19441.1| hypothetical protein EAMY_0491 [Erwinia amylovora CFBP1430]
          Length = 183

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 53/124 (42%), Positives = 81/124 (65%), Gaps = 3/124 (2%)

Query: 8   FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67
           FNL  G ++ HY ++I GA+    +ATR V +HI+PGD GY +P  G+HLYTWSLI ++ 
Sbjct: 59  FNLYFGNRKLHYGMVIFGALALATVATRHVFLHIMPGDTGYGLPFLGIHLYTWSLILAVA 118

Query: 68  IILFISVLMLFDTAEIK---VAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124
           +I  ++V ++          V KS  ++I + ++  ++ AN +ST+L+CG  QC DNPT+
Sbjct: 119 LIFGVAVTLMITPDAATPSVVNKSITQKILMIIYALIVVANLLSTVLQCGGGQCDDNPTY 178

Query: 125 YQLL 128
           YQLL
Sbjct: 179 YQLL 182


>gi|118497888|ref|YP_898938.1| DsbB family disulfide bond formation protein [Francisella
           tularensis subsp. novicida U112]
 gi|118423794|gb|ABK90184.1| disulfide bond formation protein DsbB family [Francisella novicida
           U112]
          Length = 189

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 13/136 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           IG GFL N+   I+  HY++ +L A+ T  ++ RQ+ +H+    +G+   V GMH+Y+W 
Sbjct: 53  IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111

Query: 62  LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109
            + S+V I++I+++M +        +                +I   +F+ ++FAN +ST
Sbjct: 112 FVISMVAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171

Query: 110 ILECGLTQCFDNPTFY 125
             ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187


>gi|17548420|ref|NP_521760.1| hypothetical protein RS04712 [Ralstonia solanacearum GMI1000]
 gi|17430667|emb|CAD17350.1| probable transmembrane protein [Ralstonia solanacearum GMI1000]
          Length = 184

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 7/134 (5%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
            G+G   NL  G +  HY++MIL ++    IA RQ+L+HI+PG   Y   ++G+HLYT +
Sbjct: 49  AGVGLALNLRFGARPAHYALMILASLAGAAIAGRQILLHIVPGTGTYGEALWGLHLYTLA 108

Query: 62  LIFSLVIILFISVLMLFDTAE-------IKVAKSPVREIAIYLFVFLIFANFISTILECG 114
            I   V+I   ++L+L + +         +   S     A+ L   L   N + T LECG
Sbjct: 109 FIAFAVMIAGTAILLLLERSPEADEGPAKRAPMSRAALAAVALLTVLTLGNVLGTFLECG 168

Query: 115 LTQCFDNPTFYQLL 128
              C D+P  Y LL
Sbjct: 169 GGMCADDPVIYDLL 182


>gi|167627604|ref|YP_001678104.1| hypothetical protein Fphi_1378 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597605|gb|ABZ87603.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 146

 Score =  126 bits (317), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 13/138 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           IG  FL N+   ++  HY++ +L A+ T  I+ RQ+ +H+    +G+   VFG+H+YTW 
Sbjct: 9   IGFEFLLNIRYSVRPSHYALSLLAAVLTSFISLRQIALHVS-DPVGFGSTVFGLHMYTWV 67

Query: 62  LIFSLVIILFISVLMLFDTAEI------------KVAKSPVREIAIYLFVFLIFANFIST 109
            +  ++ I++IS++M +                       +  I   +F+  IF N  ST
Sbjct: 68  FVICMIAIIYISIVMSYPNQYKINKDANEIADAKNNKIRTLSHIVFVIFIIAIFTNIAST 127

Query: 110 ILECGLTQCFDNPTFYQL 127
            +ECG+ +C DNPT Y L
Sbjct: 128 FIECGIHECPDNPTKYIL 145


>gi|310766387|gb|ADP11337.1| hypothetical protein EJP617_16560 [Erwinia sp. Ejp617]
          Length = 183

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/124 (43%), Positives = 80/124 (64%), Gaps = 3/124 (2%)

Query: 8   FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67
           FNL  G ++ HY ++I+GA+    +ATR V +HI PGD GY +P  G+HLYTWSLI ++ 
Sbjct: 59  FNLYFGNRKLHYGMVIIGALALAAVATRHVFLHITPGDTGYGLPFLGIHLYTWSLILAVA 118

Query: 68  IILFISVLMLFDTAEIK---VAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124
           II+ ++V ++          V KS  ++  + +F  ++ AN  ST+L+CG  QC DNPT+
Sbjct: 119 IIIGVAVTLMITPDAATAPIVHKSLTQKCLMVIFALMMVANLASTVLQCGGGQCDDNPTY 178

Query: 125 YQLL 128
           YQLL
Sbjct: 179 YQLL 182


>gi|187931777|ref|YP_001891762.1| disulfide bond formation protein DsbB family [Francisella
           tularensis subsp. mediasiatica FSC147]
 gi|187712686|gb|ACD30983.1| disulfide bond formation protein DsbB family [Francisella
           tularensis subsp. mediasiatica FSC147]
          Length = 189

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           IG GFL N+   I+  HY++ +L A+ T  ++ RQ+ +H+    +G+   V GMH+Y+W 
Sbjct: 53  IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111

Query: 62  LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109
            + S++ I++I+++M +        +                +I   +F+ ++FAN +ST
Sbjct: 112 FVISMIAIIYIAIVMSYPRQYELRRQPQQISETKNNIIRLFIQIIFIIFLLVVFANVVST 171

Query: 110 ILECGLTQCFDNPTFY 125
             ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187


>gi|320085627|emb|CBY95405.1| hypothetical protein SENTW_1325 [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 204

 Score =  126 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/133 (41%), Positives = 86/133 (64%), Gaps = 4/133 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G GFLFNL  G++  HY ++I+G+I T ++A+RQ+ +HI+PGD GY    FG+H YTW
Sbjct: 53  IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116
           +LI S++II+ ++V++   +             +  I  ++F+ LI AN IST+LECG  
Sbjct: 113 TLITSILIIIAVAVVLAISSMNAAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGG 172

Query: 117 QCFDNPTFYQLLN 129
           +C  NP  Y+LL+
Sbjct: 173 ECAANPVTYKLLS 185


>gi|56708347|ref|YP_170243.1| hypothetical protein FTT_1288 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670818|ref|YP_667375.1| hypothetical protein FTF1288 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224457473|ref|ZP_03665946.1| hypothetical protein FtultM_07362 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370969|ref|ZP_04986973.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254875170|ref|ZP_05247880.1| disulfide bond formation protein DsbB family [Francisella
           tularensis subsp. tularensis MA00-2987]
 gi|54114265|gb|AAV29766.1| NT02FT0215 [synthetic construct]
 gi|56604839|emb|CAG45921.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110321151|emb|CAL09304.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. tularensis FSC198]
 gi|151569211|gb|EDN34865.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254841169|gb|EET19605.1| disulfide bond formation protein DsbB family [Francisella
           tularensis subsp. tularensis MA00-2987]
 gi|282159586|gb|ADA78977.1| hypothetical protein NE061598_07440 [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 189

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           IG GFL N+   I+  HY++ +L A+ T  ++ RQ+ +H+    +G+   V GMH+Y+W 
Sbjct: 53  IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111

Query: 62  LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109
            + S++ I++I+++M +        +                +I   +F+ ++FAN +ST
Sbjct: 112 FVISMIAIIYIAIVMSYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171

Query: 110 ILECGLTQCFDNPTFY 125
             ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187


>gi|16760750|ref|NP_456367.1| hypothetical protein STY2002 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29141492|ref|NP_804834.1| hypothetical protein t1014 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213163491|ref|ZP_03349201.1| hypothetical protein Salmoneentericaenterica_27100 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213424177|ref|ZP_03357042.1| hypothetical protein SentesTyphi_00330 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213581983|ref|ZP_03363809.1| hypothetical protein SentesTyph_12584 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213609962|ref|ZP_03369788.1| hypothetical protein SentesTyp_05317 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648148|ref|ZP_03378201.1| hypothetical protein SentesTy_13194 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213857347|ref|ZP_03384318.1| hypothetical protein SentesT_19425 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289825633|ref|ZP_06544810.1| hypothetical protein Salmonellentericaenterica_09396 [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25513171|pir||AH0730 probable membrane protein STY2002 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16503047|emb|CAD05546.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137119|gb|AAO68683.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 204

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/133 (41%), Positives = 86/133 (64%), Gaps = 4/133 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G GFLFNL  G++  HY ++I+G+I T ++A+RQ+ +HI+PGD GY    FG+H YTW
Sbjct: 53  IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116
           +LI S++II+ ++V++   +             +  I  ++F+ LI AN IST+LECG  
Sbjct: 113 TLITSILIIIAVAVVLAISSMNAAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGG 172

Query: 117 QCFDNPTFYQLLN 129
           +C  NP  Y+LL+
Sbjct: 173 ECAANPVTYKLLS 185


>gi|312171047|emb|CBX79306.1| hypothetical protein EAIL5_0486 [Erwinia amylovora ATCC BAA-2158]
          Length = 183

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/124 (42%), Positives = 81/124 (65%), Gaps = 3/124 (2%)

Query: 8   FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67
           FNL  G ++ HY ++I GA+    +ATR V +HI+PGD GY +P  G+HLYTWSLI ++ 
Sbjct: 59  FNLYFGNRKLHYGMVIFGALALATVATRHVFLHIMPGDTGYGLPFLGIHLYTWSLILAVA 118

Query: 68  IILFISVLMLFDT---AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124
           +I+ ++V ++          V KS   +I + ++  ++ AN +ST+L+CG  QC DNPT+
Sbjct: 119 LIIGVAVTLMITPDAGTPYVVNKSITEKILMIIYALIMVANLLSTVLQCGGGQCDDNPTY 178

Query: 125 YQLL 128
           YQLL
Sbjct: 179 YQLL 182


>gi|194442392|ref|YP_002041129.1| hypothetical protein SNSL254_A2020 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|205357369|ref|ZP_03223727.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|207856629|ref|YP_002243280.1| hypothetical protein SEN1172 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|194401055|gb|ACF61277.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|205322135|gb|EDZ09974.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|206708432|emb|CAR32753.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
          Length = 206

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G GFLFNL  G++  HY ++I+G+I T ++A+RQ+ +HI+PGD GY    FG+H YTW
Sbjct: 55  IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116
           +LI S++II+ ++V++   +  +          +  I  ++F+ LI AN IST+LECG  
Sbjct: 115 TLITSILIIIAVAVVLAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 174

Query: 117 QCFDNPTFYQLLN 129
           +C  NP  Y+LL+
Sbjct: 175 ECAANPVTYKLLS 187


>gi|205352473|ref|YP_002226274.1| hypothetical protein SG1250 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205272254|emb|CAR37130.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326627529|gb|EGE33872.1| Putative membrane protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 204

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G GFLFNL  G++  HY ++I+G+I T ++A+RQ+ +HI+PGD GY    FG+H YTW
Sbjct: 53  IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116
           +LI S++II+ ++V++   +  +          +  I  ++F+ LI AN IST+LECG  
Sbjct: 113 TLITSILIIIAVAVVLAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 172

Query: 117 QCFDNPTFYQLLN 129
           +C  NP  Y+LL+
Sbjct: 173 ECAANPVTYKLLS 185


>gi|241668173|ref|ZP_04755751.1| hypothetical protein FphipA2_05361 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876708|ref|ZP_05249418.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842729|gb|EET21143.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 190

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 13/138 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           IG GFL N+   I+  HY++ +L A+ T  I+ RQ+ +H+    +G+   VFG+H+YTW 
Sbjct: 53  IGFGFLLNMHYHIRPSHYALSLLAAVLTSFISLRQIALHVS-DPVGFGSTVFGLHMYTWV 111

Query: 62  LIFSLVIILFISVLMLFDTAEI------------KVAKSPVREIAIYLFVFLIFANFIST 109
            +  ++ I++IS++M +                       +  I   +F+  IF N  ST
Sbjct: 112 FVICMIAIIYISIVMSYPNQYKINKDANEIADAKNNKIRKLSHIVFVIFIIAIFTNIAST 171

Query: 110 ILECGLTQCFDNPTFYQL 127
            +ECG+ +C DNPT Y L
Sbjct: 172 FIECGIHECPDNPTKYIL 189


>gi|299068597|emb|CBJ39827.1| conserved membrane protein of unknown function [Ralstonia
           solanacearum CMR15]
          Length = 168

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 7/134 (5%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
            G+G   NL  G +  HY++MIL ++    IA RQ+L+HI+PG   Y   ++G+HLYT +
Sbjct: 33  AGVGLALNLRFGARPAHYALMILASLAGAAIAGRQILLHIVPGTGTYGEALWGLHLYTLA 92

Query: 62  LIFSLVIILFISVLMLFDTAE-------IKVAKSPVREIAIYLFVFLIFANFISTILECG 114
            I  + +I   +VL+L +               S     A+ L   L   N + T LECG
Sbjct: 93  FIAFMAMIAGTAVLLLLERLPDADEGLAKPAPMSRAALAAVALLTVLTLGNVLGTFLECG 152

Query: 115 LTQCFDNPTFYQLL 128
              C D+P  Y LL
Sbjct: 153 GGMCADDPVIYDLL 166


>gi|200390522|ref|ZP_03217133.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|199602967|gb|EDZ01513.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
          Length = 204

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G GFLFNL  G++  HY ++I+G+I T ++A+RQ+ +HI+PGD GY    FG+H YTW
Sbjct: 53  ITGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116
           +LI S++II+ ++V++   +  +          +  I  ++F+ LI AN IST+LECG  
Sbjct: 113 TLITSILIIIAVAVVLAISSMNVAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGG 172

Query: 117 QCFDNPTFYQLLN 129
           +C  NP  Y+LL+
Sbjct: 173 ECAANPVTYKLLS 185


>gi|56413218|ref|YP_150293.1| hypothetical protein SPA1008 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362143|ref|YP_002141780.1| hypothetical protein SSPA0940 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56127475|gb|AAV76981.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197093620|emb|CAR59089.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 204

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/133 (41%), Positives = 86/133 (64%), Gaps = 4/133 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G GFLFNL  G++  HY ++I+G+I T ++A+RQ+ +HI+PGD GY    FG+H YTW
Sbjct: 53  IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQMCLHIMPGDTGYGSAFFGLHFYTW 112

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116
           +LI S++II+ ++V++   +             +  I  ++F+ LI AN IST+LECG  
Sbjct: 113 TLITSILIIIAVAVVLAISSMNAAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGG 172

Query: 117 QCFDNPTFYQLLN 129
           +C  NP  Y+LL+
Sbjct: 173 ECAANPVTYKLLS 185


>gi|259909747|ref|YP_002650103.1| hypothetical protein EpC_31220 [Erwinia pyrifoliae Ep1/96]
 gi|224965369|emb|CAX56901.1| putative membrane protein [Erwinia pyrifoliae Ep1/96]
          Length = 183

 Score =  123 bits (310), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 53/124 (42%), Positives = 79/124 (63%), Gaps = 3/124 (2%)

Query: 8   FNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLV 67
           FNL  G ++ HY ++I+GA+    +ATR V +HI PGD GY +P  G+HLYTWSLI ++ 
Sbjct: 59  FNLYFGNRKLHYGMVIIGALALAAVATRHVFLHITPGDTGYGLPFLGIHLYTWSLILAVA 118

Query: 68  IILFISVLMLFDTAEIK---VAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTF 124
           II+ ++V ++          V KS  +   + ++  ++ AN  ST+L+CG  QC DNPT+
Sbjct: 119 IIIGVAVTLMITPDAATAPVVIKSFTQRFLMIIYALILVANLSSTVLQCGGGQCDDNPTY 178

Query: 125 YQLL 128
           YQLL
Sbjct: 179 YQLL 182


>gi|198243055|ref|YP_002215275.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197937571|gb|ACH74904.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|326623020|gb|EGE29365.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 204

 Score =  123 bits (310), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G GFLFNL  G++  HY ++I+G+I T ++A+RQ+ +HI+PGD GY    FG+H YTW
Sbjct: 53  IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116
           +LI S++II+ ++V++   +  +          +  I  ++F+ LI AN IST+LECG  
Sbjct: 113 TLITSILIIIAVAVVLAISSMNVAFRSLNINPVLFSIVGWVFLLLITANLISTVLECGGG 172

Query: 117 QCFDNPTFYQLLN 129
           +C  NP  Y+LL+
Sbjct: 173 ECAANPVTYKLLS 185


>gi|52840653|ref|YP_094452.1| inner (transmembrane) protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52627764|gb|AAU26505.1| inner (transmembrane) protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 182

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 58/130 (44%), Positives = 82/130 (63%), Gaps = 2/130 (1%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           +G+ F+ NL+ GI+  HY +M+L  +    I+ RQ+ IH+ PGD GY   +FG+HLYTWS
Sbjct: 51  VGLCFVMNLMLGIRASHYGLMLLATLLGLSISVRQMYIHLTPGDPGYGGLIFGLHLYTWS 110

Query: 62  LIFSLVIILFISVLMLFDTAEIK--VAKSPVREIAIYLFVFLIFANFISTILECGLTQCF 119
            I  LVIIL I+  ++ D   +     +S   ++ I++F  LI AN IST LECG  +C 
Sbjct: 111 AIIFLVIILLIAGALILDKGFMPDYKVRSKSAKVMIWVFFILILANGISTFLECGPHECP 170

Query: 120 DNPTFYQLLN 129
           DNP+ Y LLN
Sbjct: 171 DNPSKYYLLN 180


>gi|160872578|ref|ZP_02062710.1| disulfide bond formation protein DsbB family [Rickettsiella grylli]
 gi|159121377|gb|EDP46715.1| disulfide bond formation protein DsbB family [Rickettsiella grylli]
          Length = 234

 Score =  122 bits (307), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 6/132 (4%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           I  GFL N+   I+  HY++ +L A+ T  I+TRQ+ +H+ PGD GY +P+FG+HLYTW 
Sbjct: 93  IAFGFLLNVQFKIRPVHYALSLLSAMLTAAISTRQIFLHVAPGDQGYGLPLFGLHLYTWV 152

Query: 62  LIFSLVIILFISVLML------FDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGL 115
            I  + II++IS++        ++          ++         L   N I+T LECG+
Sbjct: 153 FILCVAIIIYISIIFSIFPQYQYEEPPKTKTMKLLKHATFAAVFVLAIFNGIATYLECGI 212

Query: 116 TQCFDNPTFYQL 127
             C +NP  Y++
Sbjct: 213 KVCPENPVHYEI 224


>gi|300696744|ref|YP_003747405.1| hypothetical protein RCFBP_mp10194 [Ralstonia solanacearum
           CFBP2957]
 gi|299073468|emb|CBJ52984.1| conserved membrane protein of unknown function [Ralstonia
           solanacearum CFBP2957]
          Length = 188

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/138 (34%), Positives = 68/138 (49%), Gaps = 11/138 (7%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           +G+G   NL  G +  HY++MIL ++   +IA RQVL+HI+PG   Y   ++G+HLYT +
Sbjct: 49  VGVGLALNLCFGARPAHYALMILASLGGAVIAGRQVLLHIVPGTGTYGEALWGLHLYTLA 108

Query: 62  LIFSLVIILFISVLMLFDT-----------AEIKVAKSPVREIAIYLFVFLIFANFISTI 110
            I   VII   +V++  +                   S     A+ L   L   N + T 
Sbjct: 109 FIAFSVIIAGTAVMLFLERLPDADEGTAGVPREPSLTSRAALAAVALLTVLTLGNVVGTF 168

Query: 111 LECGLTQCFDNPTFYQLL 128
           LECG   C D+P  Y LL
Sbjct: 169 LECGTGMCADDPVIYDLL 186


>gi|51246282|ref|YP_066166.1| hypothetical protein DP2430 [Desulfotalea psychrophila LSv54]
 gi|50877319|emb|CAG37159.1| hypothetical membrane protein [Desulfotalea psychrophila LSv54]
          Length = 195

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 4/129 (3%)

Query: 4   IGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLI 63
           IG + NL  G++  HY I+++ A+     + RQ+L+HI+PG   Y  P++G H+YTW+ I
Sbjct: 66  IGAVLNLNFGMRTSHYGIILISALFGMAGSVRQILLHIVPGTGNYGAPIWGYHMYTWAGI 125

Query: 64  FSLVIILFISVLMLFDTA-EIKVAKSPVREIAIYLFVFLIFANF---ISTILECGLTQCF 119
                ++F ++++L +    + +      +   Y+ +F I  +    + T  ECGL QC 
Sbjct: 126 AFFCSLVFSAIMLLQERTITLGMIVQQRDKATRYITIFAITLSLTLVVLTFAECGLGQCP 185

Query: 120 DNPTFYQLL 128
           DNPT Y L 
Sbjct: 186 DNPTRYWLF 194


>gi|207722325|ref|YP_002252761.1| hypothetical protein RSMK04922 [Ralstonia solanacearum MolK2]
 gi|206587502|emb|CAQ18084.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
          Length = 174

 Score =  121 bits (303), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 13/140 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP--GDLGYSIPVFGMHLYT 59
           +G+G   NL  G +  HY++MIL ++   +IA RQVL+HI+P  G   Y   ++G+HLYT
Sbjct: 33  VGVGLALNLRFGARPAHYALMILASLGGAVIAGRQVLLHIVPGTGTGTYGEALWGLHLYT 92

Query: 60  WSLIFSLVIILFISVLMLFDT-----------AEIKVAKSPVREIAIYLFVFLIFANFIS 108
            + I   VII   +V++  +                   S     A+ L   L   N + 
Sbjct: 93  LAFIAFSVIIAGTAVMLFLERLPEADEGTARLPREPSLTSRAALAAVALLTVLTLGNVVG 152

Query: 109 TILECGLTQCFDNPTFYQLL 128
           T LECG   C D+P  Y+LL
Sbjct: 153 TFLECGAGMCADDPGAYELL 172


>gi|194738032|ref|YP_002114899.1| hypothetical protein SeSA_A2012 [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197301067|ref|ZP_03166277.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|194713534|gb|ACF92755.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197288641|gb|EDY28016.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
          Length = 206

 Score =  120 bits (302), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G GFLFNL  G++  HY ++I+G+I T ++A+RQ+ +HI+PGD GY    FG+H YTW
Sbjct: 55  IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116
           +LI S++II+ ++V++   +  +          +  I  ++F+ LI AN IST+LECG  
Sbjct: 115 TLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 174

Query: 117 QCFDNPTFYQLLN 129
           +C  NP  Y+LL+
Sbjct: 175 ECAANPVTYKLLS 187


>gi|205358999|ref|ZP_03224187.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205339493|gb|EDZ26257.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 206

 Score =  120 bits (302), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G GFLFNL  G++  HY ++I+G+I T ++A+RQ+ +HI+PGD GY    FG+H YTW
Sbjct: 55  IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116
           +LI S++II+ ++V++   +  +          +  I  ++F+ LI AN IST+LECG  
Sbjct: 115 TLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 174

Query: 117 QCFDNPTFYQLLN 129
           +C  NP  Y+LL+
Sbjct: 175 ECAANPVTYKLLS 187


>gi|16765205|ref|NP_460820.1| inner membrane protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167993831|ref|ZP_02574924.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168462619|ref|ZP_02696550.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|194451478|ref|YP_002045916.1| hypothetical protein SeHA_C2074 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197261831|ref|ZP_03161905.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|204931001|ref|ZP_03221827.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|16420398|gb|AAL20779.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|194409782|gb|ACF70001.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|195634091|gb|EDX52443.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197240086|gb|EDY22706.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|204320045|gb|EDZ05250.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205328218|gb|EDZ14982.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|267993834|gb|ACY88719.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301158386|emb|CBW17889.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912858|dbj|BAJ36832.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321224505|gb|EFX49568.1| Putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322616860|gb|EFY13768.1| hypothetical protein SEEM315_15824 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618099|gb|EFY14991.1| hypothetical protein SEEM971_05198 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322625770|gb|EFY22589.1| hypothetical protein SEEM973_08997 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322626220|gb|EFY23030.1| hypothetical protein SEEM974_05795 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322633826|gb|EFY30566.1| hypothetical protein SEEM201_02204 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322638980|gb|EFY35673.1| hypothetical protein SEEM202_10198 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322640518|gb|EFY37170.1| hypothetical protein SEEM954_02430 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644185|gb|EFY40730.1| hypothetical protein SEEM054_02737 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648391|gb|EFY44845.1| hypothetical protein SEEM675_10827 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655415|gb|EFY51723.1| hypothetical protein SEEM965_14118 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322660829|gb|EFY57060.1| hypothetical protein SEEM19N_10393 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322662875|gb|EFY59082.1| hypothetical protein SEEM801_18882 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322668059|gb|EFY64218.1| hypothetical protein SEEM507_21346 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674179|gb|EFY70273.1| hypothetical protein SEEM877_13623 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675466|gb|EFY71540.1| hypothetical protein SEEM867_03512 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322683119|gb|EFY79135.1| hypothetical protein SEEM180_11192 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686813|gb|EFY82791.1| hypothetical protein SEEM600_19185 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323130142|gb|ADX17572.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323195295|gb|EFZ80475.1| hypothetical protein SEEM581_08834 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199188|gb|EFZ84283.1| hypothetical protein SEEM501_00410 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202999|gb|EFZ88032.1| hypothetical protein SEEM460_02801 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323207444|gb|EFZ92392.1| hypothetical protein SEEM020_07033 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323209933|gb|EFZ94845.1| hypothetical protein SEEM6152_06518 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217427|gb|EGA02146.1| hypothetical protein SEEM0077_21182 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323224646|gb|EGA08919.1| hypothetical protein SEEM0055_00781 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323231449|gb|EGA15562.1| hypothetical protein SEEM0052_14546 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235890|gb|EGA19969.1| hypothetical protein SEEM3312_13514 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240459|gb|EGA24502.1| hypothetical protein SEEM5258_10806 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323245352|gb|EGA29352.1| hypothetical protein SEEM1156_16456 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246718|gb|EGA30690.1| hypothetical protein SEEM9199_07591 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323253573|gb|EGA37401.1| hypothetical protein SEEM8282_15368 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323257720|gb|EGA41403.1| hypothetical protein SEEM8283_00622 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323260383|gb|EGA43999.1| hypothetical protein SEEM8284_20548 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266825|gb|EGA50311.1| hypothetical protein SEEM8285_18889 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269031|gb|EGA52487.1| hypothetical protein SEEM8287_03672 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|332988754|gb|AEF07737.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 204

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G GFLFNL  G++  HY ++I+G+I T ++A+RQ+ +HI+PGD GY    FG+H YTW
Sbjct: 53  IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116
           +LI S++II+ ++V++   +  +          +  I  ++F+ LI AN IST+LECG  
Sbjct: 113 TLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 172

Query: 117 QCFDNPTFYQLLN 129
           +C  NP  Y+LL+
Sbjct: 173 ECAANPVTYKLLS 185


>gi|241668105|ref|ZP_04755683.1| DsbB family disulfide bond formation protein [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
 gi|254876640|ref|ZP_05249350.1| disulfide bond formation protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842661|gb|EET21075.1| disulfide bond formation protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 178

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 1/119 (0%)

Query: 12  SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
            G K ++Y  + L AI    +A  Q+L+HI+PG   Y   VF +H+YTW+ I S++ I++
Sbjct: 59  HGNKYKNYLFVTLVAILNAAMAMTQILLHIVPGTGNYGDAVFSLHMYTWNFIVSIIFIIY 118

Query: 72  ISVLMLFDTAEIKVAK-SPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
            ++   F   E K    +   +IAI+L + L  AN I+  +ECG   C  +P  Y LLN
Sbjct: 119 ATICGFFTPNEDKKKNLNLFTKIAIFLILALTLANTINVFVECGPHLCPSDPDSYWLLN 177


>gi|167627537|ref|YP_001678037.1| DsbB family disulfide bond formation protein [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
 gi|167597538|gb|ABZ87536.1| disulfide bond formation protein, DsbB family [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
          Length = 178

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 1/119 (0%)

Query: 12  SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
            G K ++Y  + L AI    +A  Q+L+HI+PG   Y   VF +H+YTW+ I S++ I++
Sbjct: 59  HGNKYKNYLFVTLVAILNAAMAMTQILLHIVPGTGNYGDAVFSLHMYTWNFIVSIIFIIY 118

Query: 72  ISVLMLFD-TAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
            ++   F    + K   S   ++AI+L + L  AN IS  +ECG   C  +P  Y LLN
Sbjct: 119 ATICGFFTLNEDKKKNLSLFAKVAIFLILALTLANTISVFIECGPHLCPSDPDSYWLLN 177


>gi|168259875|ref|ZP_02681848.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|205350713|gb|EDZ37344.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
          Length = 204

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G GFLFNL  G++  HY ++I+G+I T ++A+RQ+ +HI+PGD GY    FG+H YTW
Sbjct: 53  IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTW 112

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116
           +LI S++II+ ++V++   +  +          +  I  ++F+ LI AN IST+LECG  
Sbjct: 113 TLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 172

Query: 117 QCFDNPTFYQLLN 129
           +C  NP  Y+LL+
Sbjct: 173 ECAANPVTYKLLS 185


>gi|148360976|ref|YP_001252183.1| transmembrane protein [Legionella pneumophila str. Corby]
 gi|296105958|ref|YP_003617658.1| inner (transmembrane) protein [Legionella pneumophila 2300/99
           Alcoy]
 gi|148282749|gb|ABQ56837.1| inner (transmembrane) protein [Legionella pneumophila str. Corby]
 gi|295647859|gb|ADG23706.1| inner (transmembrane) protein [Legionella pneumophila 2300/99
           Alcoy]
          Length = 182

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 57/130 (43%), Positives = 81/130 (62%), Gaps = 2/130 (1%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           +G+ F+ NL+ GI+  HY +M+L ++    I+ RQ+ IH+ PGD GY     G+HLYTWS
Sbjct: 51  VGLCFVMNLMLGIRASHYGLMLLASLLGLSISVRQMYIHLTPGDPGYGGLFLGLHLYTWS 110

Query: 62  LIFSLVIILFISVLMLFDTAEIK--VAKSPVREIAIYLFVFLIFANFISTILECGLTQCF 119
            I  LVIIL I+  ++ D   +     +S   ++ I++F  LI AN IST LECG  +C 
Sbjct: 111 AIIFLVIILLIAGALILDKGFMPDYKVRSKSAKVMIWVFFILILANGISTFLECGPHECP 170

Query: 120 DNPTFYQLLN 129
           DNP+ Y LLN
Sbjct: 171 DNPSKYYLLN 180


>gi|62180435|ref|YP_216852.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224583639|ref|YP_002637437.1| hypothetical protein SPC_1858 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|62128068|gb|AAX65771.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224468166|gb|ACN45996.1| hypothetical protein SPC_1858 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322714908|gb|EFZ06479.1| putative inner membrane protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 204

 Score =  119 bits (300), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 4/133 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G GFLFNL  G++  HY ++I+G+I T ++A+RQ+ +HI+PGD GY    FG+H YTW
Sbjct: 53  IAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQMCLHIMPGDTGYGSTFFGLHFYTW 112

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLT 116
           +LI S++II+ ++V++   +  +          +  I  ++F+ LI AN IST+LECG  
Sbjct: 113 TLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGG 172

Query: 117 QCFDNPTFYQLLN 129
           +C  NP  Y+LL+
Sbjct: 173 ECAANPVTYKLLS 185


>gi|54296443|ref|YP_122812.1| hypothetical protein lpp0474 [Legionella pneumophila str. Paris]
 gi|53750228|emb|CAH11622.1| hypothetical protein lpp0474 [Legionella pneumophila str. Paris]
          Length = 182

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/130 (43%), Positives = 81/130 (62%), Gaps = 2/130 (1%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           +G+ F+ NL+ GI+  HY +M+L ++    I+ RQ+ IH+ PGD GY     G+HLYTWS
Sbjct: 51  VGLCFVMNLMLGIRASHYGLMLLASLLGLSISVRQMYIHLTPGDPGYGGLFLGLHLYTWS 110

Query: 62  LIFSLVIILFISVLMLFDTAEIK--VAKSPVREIAIYLFVFLIFANFISTILECGLTQCF 119
            I  LVIIL I+  ++ D   +     +S   ++ I++F  LI AN IST LECG  +C 
Sbjct: 111 AIIFLVIILLIAGALILDKGLMPDYKVRSKSAKVMIWVFFILILANGISTFLECGPHECP 170

Query: 120 DNPTFYQLLN 129
           DNP+ Y LLN
Sbjct: 171 DNPSKYYLLN 180


>gi|54293401|ref|YP_125816.1| hypothetical protein lpl0450 [Legionella pneumophila str. Lens]
 gi|53753233|emb|CAH14680.1| hypothetical protein lpl0450 [Legionella pneumophila str. Lens]
 gi|307609216|emb|CBW98680.1| hypothetical protein LPW_04891 [Legionella pneumophila 130b]
          Length = 182

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/130 (43%), Positives = 81/130 (62%), Gaps = 2/130 (1%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           +G+ F+ NL+ GI+  HY +M+L ++    I+ RQ+ IH+ PGD GY     G+HLYTWS
Sbjct: 51  VGLCFVMNLMLGIRASHYGLMLLASLLGLSISVRQMYIHLTPGDPGYGGLFLGLHLYTWS 110

Query: 62  LIFSLVIILFISVLMLFDTAEIK--VAKSPVREIAIYLFVFLIFANFISTILECGLTQCF 119
            I  LVIIL I+  ++ D   +     +S   ++ I++F  LI AN IST LECG  +C 
Sbjct: 111 AIIFLVIILLIAGALILDKGLMPDYKVRSKSAKVMIWVFFILILANGISTFLECGPHECP 170

Query: 120 DNPTFYQLLN 129
           DNP+ Y LLN
Sbjct: 171 DNPSKYYLLN 180


>gi|170728156|ref|YP_001762182.1| disulfide bond formation protein DsbB [Shewanella woodyi ATCC
           51908]
 gi|169813503|gb|ACA88087.1| Disulphide bond formation protein DsbB [Shewanella woodyi ATCC
           51908]
          Length = 482

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           ++ +  +F    G+K ++   +IL ++       R    HIL     G+   +FG+H Y 
Sbjct: 52  LVALIAIFITRYGLKPKYLGALILASVYGLWAGYRHSSNHILKDIGQGFGPAIFGVHTYV 111

Query: 60  WSLIFSLVIILFISVLML-----FDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECG 114
           W ++  LVI+LF +VL++         E K + + +    + +F+ +I  N +    + G
Sbjct: 112 WVMVVFLVILLFAAVLLMLQGDKLSEKEDKNSWTLLNRSTVMVFLVVIGFNIVQAFSQTG 171

Query: 115 LTQCFDNPTFYQL 127
                     Y++
Sbjct: 172 PFPFIGQSDPYRM 184


>gi|156502603|ref|YP_001428668.1| hypothetical protein FTA_1237 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|156253206|gb|ABU61712.1| hypothetical membrane protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 194

 Score =  117 bits (293), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           IG GFL N+   I+  HY++ +L A+ T  I+ RQ+ +H+    +G+   V GMH+Y+W 
Sbjct: 58  IGFGFLLNMRFNIRPSHYALSLLAAVFTSFISLRQIALHVT-DPVGFGSKVLGMHMYSWV 116

Query: 62  LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109
            + S++ I++I++++ +        +                +I   +F+ ++FAN +ST
Sbjct: 117 FVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 176

Query: 110 ILECGLTQCFDNPTFY 125
             ECGL +C D+PT Y
Sbjct: 177 FFECGLHECPDDPTRY 192


>gi|157963725|ref|YP_001503759.1| disulfide bond formation protein DsbB [Shewanella pealeana ATCC
           700345]
 gi|157848725|gb|ABV89224.1| Disulphide bond formation protein DsbB [Shewanella pealeana ATCC
           700345]
          Length = 484

 Score =  117 bits (293), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 8/132 (6%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           ++ +  +F +  G+K ++   +I+ A+       R    HIL     G+   +FG+H Y 
Sbjct: 51  LVSLIAIFIMRYGLKPKYIGALIITAVYGLWAGYRHSSAHILRDIGQGFGPAIFGVHTYV 110

Query: 60  WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFANFISTILECG 114
           W ++   +I+LF  VLML               S + ++ + +F+ +I  N +    + G
Sbjct: 111 WVIVVFAIILLFAGVLMLLQGDKLVEKSDSSEWSLLNKVTVNVFLVIICFNIVQAFTQTG 170

Query: 115 LTQCFD--NPTF 124
                   +P  
Sbjct: 171 PFPYIGQSDPVR 182


>gi|49474632|ref|YP_032674.1| hypothetical protein BQ11240 [Bartonella quintana str. Toulouse]
 gi|49240136|emb|CAF26585.1| hypothetical protein BQ11240 [Bartonella quintana str. Toulouse]
          Length = 196

 Score =  116 bits (292), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 48/133 (36%), Positives = 78/133 (58%), Gaps = 4/133 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G GFLFN+   +++ HY ++ILG +  CI A RQ+ + I  GDLG    +FG+HLY W
Sbjct: 57  IAGCGFLFNIHLRVRKIHYGMVILGCMVICISAARQIFLQITLGDLGDGPTLFGLHLYIW 116

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAK----SPVREIAIYLFVFLIFANFISTILECGLT 116
           + I + + +  ++ +M+      K         +  +A +LFVFLI AN ++ ILECG  
Sbjct: 117 AFIIAGLCLFAVAFIMILSEWTRKFKVFSPFPRLGGMASFLFVFLIAANLLTAILECGSG 176

Query: 117 QCFDNPTFYQLLN 129
            C ++P  Y++L+
Sbjct: 177 LCTNDPVKYEVLS 189


>gi|167622296|ref|YP_001672590.1| disulfide bond formation protein DsbB [Shewanella halifaxensis
           HAW-EB4]
 gi|167352318|gb|ABZ74931.1| Disulphide bond formation protein DsbB [Shewanella halifaxensis
           HAW-EB4]
          Length = 483

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 8/132 (6%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           ++ +  +F +  G+K ++   +I+ A+       R    HIL     G+   +FG+H Y 
Sbjct: 50  LVSLIAIFIMRYGLKPKYIGALIITAVYGLWAGYRHSSAHILRDIGQGFGPAIFGVHTYV 109

Query: 60  WSLIFSLVIILFISVLMLFD-----TAEIKVAKSPVREIAIYLFVFLIFANFISTILECG 114
           W ++   +I+LF  VLML               S + +I + +F+ +I  N +    + G
Sbjct: 110 WVIVVFAIILLFAGVLMLLQGDKLVEKSDSSEWSLLNKITVNVFLVIIGFNIVQAFTQTG 169

Query: 115 LTQCFD--NPTF 124
                   +P  
Sbjct: 170 PFPYIGQSDPVR 181


>gi|89256495|ref|YP_513857.1| hypothetical protein FTL_1173 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314925|ref|YP_763648.1| hypothetical protein FTH_1146 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|167011114|ref|ZP_02276045.1| hypothetical protein Ftulh_10473 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254367827|ref|ZP_04983847.1| hypothetical protein FTHG_01111 [Francisella tularensis subsp.
           holarctica 257]
 gi|89144326|emb|CAJ79612.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. holarctica LVS]
 gi|115129824|gb|ABI83011.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134253637|gb|EBA52731.1| hypothetical protein FTHG_01111 [Francisella tularensis subsp.
           holarctica 257]
          Length = 189

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           IG GFL N+   I+  HY++ +L A+ T  ++ RQ+ +H+    +G+   V GMH+Y+W 
Sbjct: 53  IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111

Query: 62  LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109
            + S++ I++I++++ +        +                +I   +F+ ++FAN +ST
Sbjct: 112 FVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171

Query: 110 ILECGLTQCFDNPTFY 125
             ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187


>gi|290953960|ref|ZP_06558581.1| hypothetical protein FtulhU_06713 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312637|ref|ZP_06803387.1| hypothetical protein FtulhU_06705 [Francisella tularensis subsp.
           holarctica URFT1]
          Length = 189

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           IG GFL N+   I+  HY++ +L A+ T  I+ RQ+ +H+    +G+   V GMH+Y+W 
Sbjct: 53  IGFGFLLNMRFNIRPSHYALSLLAAVFTSFISLRQIALHVT-DPVGFGSKVLGMHMYSWV 111

Query: 62  LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109
            + S++ I++I++++ +        +                +I   +F+ ++FAN +ST
Sbjct: 112 FVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171

Query: 110 ILECGLTQCFDNPTFY 125
             ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187


>gi|254369614|ref|ZP_04985625.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122568|gb|EDO66703.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 189

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           IG GFL N+   I+  HY++ +L A+ T  ++ RQ+ +H+    +G+   V GMH+Y+W 
Sbjct: 53  IGFGFLLNMRFNIRPSHYALSLLAAVFTSFVSLRQIALHVT-DPVGFGSKVLGMHMYSWV 111

Query: 62  LIFSLVIILFISVLMLFDTAEIKVAKSP------------VREIAIYLFVFLIFANFIST 109
            + S++ I++I++++ +        +                +I   +F+ ++FAN +ST
Sbjct: 112 FVISMIAIIYIAIVISYPRQYELRRQPQQISEAKNNIIRLFIQIIFIIFLLVVFANVVST 171

Query: 110 ILECGLTQCFDNPTFY 125
             ECGL +C D+PT Y
Sbjct: 172 FFECGLHECPDDPTRY 187


>gi|62257904|gb|AAX77752.1| unknown protein [synthetic construct]
          Length = 216

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 1/119 (0%)

Query: 12  SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
            G   +HY ++IL A+    +A  Q+L+HI+PG   Y   VF +H+YTW+ I S++ IL+
Sbjct: 88  HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 147

Query: 72  ISVL-MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
            ++  ++      K   S + ++AI L + L  AN ++  +ECG   C  +P  Y L N
Sbjct: 148 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 206


>gi|261886322|ref|ZP_06010361.1| DsbB family disulfide bond formation protein [Campylobacter fetus
           subsp. venerealis str. Azul-94]
          Length = 498

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 55/137 (40%), Gaps = 11/137 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60
           I +  LF L  G K ++ +++++        +   +  H L     G+ + + G+H   W
Sbjct: 51  ISVAALFVLRYGFKPKYLAMILIITAVGLWESFYHLGNHALEDVGQGFGVAILGLHTQFW 110

Query: 61  SLIFSLVIILFISVLMLFDT--AEIKVAKSPVRE------IAIYLFVFLIFANFISTILE 112
           + +    ++  + V++ F     E +      R+      +A ++F  +I +N +   + 
Sbjct: 111 AEVVFWAVVFLLGVILFFAPNLKEFEDEAYKFRKLTSANIVAFWVFFIVIVSNIVQAFIS 170

Query: 113 CG--LTQCFDNPTFYQL 127
            G        +P  Y+ 
Sbjct: 171 TGPPPFLGQGDPVRYRW 187


>gi|118475681|ref|YP_892774.1| DsbB family disulfide bond formation protein [Campylobacter fetus
           subsp. fetus 82-40]
 gi|118414907|gb|ABK83327.1| disulfide bond formation protein, DsbB family [Campylobacter fetus
           subsp. fetus 82-40]
          Length = 499

 Score =  112 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 54/137 (39%), Gaps = 11/137 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60
           I +  LF L  G K ++ +++++        +   +  H L     G+ + + G+H   W
Sbjct: 52  ISVAALFVLRYGFKPKYLAMILIITAVGLWESFYHLGNHALEDVGQGFGVAILGLHTQFW 111

Query: 61  SLIFSLVIILFISVLMLFDT--AEIKVAKSPVRE------IAIYLFVFLIFANFISTILE 112
           + +    ++  + V++ F     E +      R+      +A ++F  +I +N +   + 
Sbjct: 112 AEVVFWAVVFLLGVILFFAPNLKEFEDEAYKFRKLTSANIVAFWVFFIVIVSNIVQAFIS 171

Query: 113 CG--LTQCFDNPTFYQL 127
            G        +P  Y  
Sbjct: 172 TGPPPFLGQGDPVRYSW 188


>gi|149178805|ref|ZP_01857386.1| hypothetical protein PM8797T_06467 [Planctomyces maris DSM 8797]
 gi|148842346|gb|EDL56728.1| hypothetical protein PM8797T_06467 [Planctomyces maris DSM 8797]
          Length = 196

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 4/114 (3%)

Query: 19  YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
           Y + IL A+    I+TRQ+LIHI+P D GY  PV G+HLYTW+L+  LV+++   + ++F
Sbjct: 74  YGMSILAAVCGACISTRQILIHIVPPDPGYGDPVLGLHLYTWALVVFLVVLIDSGLNLMF 133

Query: 79  DTA---EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQC-FDNPTFYQLL 128
                 +  +  + V +  I +   +I AN +S   + G      D+P  Y+L 
Sbjct: 134 VPELVTDHPIEFNWVSKAVIGILGAVIIANLLSVFCQEGFHWVLPDDPVRYELF 187


>gi|87306912|ref|ZP_01089058.1| conserved membrane protein [Blastopirellula marina DSM 3645]
 gi|87290285|gb|EAQ82173.1| conserved membrane protein [Blastopirellula marina DSM 3645]
          Length = 196

 Score =  111 bits (278), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/114 (35%), Positives = 64/114 (56%), Gaps = 4/114 (3%)

Query: 19  YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
           Y + IL A+    I+TRQ+L+HI+P D GY  PVFG+HLYTW+L+  +V+++   + ++F
Sbjct: 74  YGMSILAAVCGAAISTRQILLHIVPPDPGYGDPVFGLHLYTWALVVFVVVLIDSGLNLMF 133

Query: 79  DTA---EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQC-FDNPTFYQLL 128
             +   +  V    V +  I LF  +I AN +    + G      D+P  Y+L 
Sbjct: 134 AGSLVTDQPVKFGSVSKGVIGLFGAVIVANLLCVFCQAGFHWILPDDPARYELF 187


>gi|217032036|ref|ZP_03437537.1| hypothetical protein HPB128_187g63 [Helicobacter pylori B128]
 gi|298736288|ref|YP_003728814.1| hypothetical protein HPB8_793 [Helicobacter pylori B8]
 gi|216946346|gb|EEC24952.1| hypothetical protein HPB128_187g63 [Helicobacter pylori B128]
 gi|298355478|emb|CBI66350.1| conserved hypothetical protein [Helicobacter pylori B8]
          Length = 490

 Score =  111 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 55/133 (41%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     ++  ++VL+ F            + +++ A Y+F  ++ +N +      G  
Sbjct: 111 WALFVFFSVVALLAVLLFFAPNTQPFKVRLLNTLQKSAFYVFFIVVGSNAVQAFFSTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|255323029|ref|ZP_05364165.1| disulfide bond formation protein, DsbB family [Campylobacter showae
           RM3277]
 gi|255299891|gb|EET79172.1| disulfide bond formation protein, DsbB family [Campylobacter showae
           RM3277]
          Length = 515

 Score =  109 bits (274), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 58/141 (41%), Gaps = 14/141 (9%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           ++G+  +  L  G+K R+ + ++ GA     +  RQ    +      G+   +FG H YT
Sbjct: 53  VVGVAGILILRYGLKARYIAAVLFGAAYGIFMTLRQASFSLYRDVGMGFGGDIFGAHTYT 112

Query: 60  WSLIFSLVIILFISVLMLFDT-----------AEIKVAKSPVREIAIYLFVFLIFANFIS 108
           W ++   V+++ + ++MLF                    +   +  I L +F+I +N + 
Sbjct: 113 WGILVYWVVVVAMGLMMLFAKDKVVSGDIARSDTRIKPLNAYSKFVIALSLFVILSNAVQ 172

Query: 109 TILECG--LTQCFDNPTFYQL 127
            ++  G        +P    L
Sbjct: 173 ALISAGIPPYSGKGDPERISL 193


>gi|282891246|ref|ZP_06299748.1| hypothetical protein pah_c050o008 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498743|gb|EFB41060.1| hypothetical protein pah_c050o008 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 169

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 4/121 (3%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
           +  G L NL  G++  HY++ +L  +    +A RQ+ +H+ PG   + +PV G+ LYTWS
Sbjct: 48  VAAGLLLNLFFGVRMSHYALSLLSCLFGGFVALRQISLHVCPGFSTFGLPVLGLSLYTWS 107

Query: 62  LIFSLVIILFISVLMLFDTAEI----KVAKSPVREIAIYLFVFLIFANFISTILECGLTQ 117
            I     +  IS+++     +      + +    ++A+ L + +  AN ++T L+CG   
Sbjct: 108 FIVFACAVCAISLILFLYRPDKSEQVPLNQEWFSKLALGLTLAISLANILTTYLQCGWGV 167

Query: 118 C 118
           C
Sbjct: 168 C 168


>gi|118497951|ref|YP_899001.1| DsbB family disulfide bond formation protein [Francisella
           tularensis subsp. novicida U112]
 gi|134301548|ref|YP_001121516.1| hypothetical protein FTW_0477 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|187931395|ref|YP_001891379.1| disulfide bond formation protein, DsbB family [Francisella
           tularensis subsp. mediasiatica FSC147]
 gi|194323173|ref|ZP_03056957.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida FTE]
 gi|208779641|ref|ZP_03246986.1| conserved hypothetical protein [Francisella novicida FTG]
 gi|224457609|ref|ZP_03666082.1| hypothetical protein FtultM_08199 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254373304|ref|ZP_04988792.1| disulfide bond formation protein [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|254374767|ref|ZP_04990248.1| disulfide bond formation protein [Francisella novicida GA99-3548]
 gi|46254985|gb|AAP97855.2| 20 kDa putative exported protein [Francisella tularensis]
 gi|118423857|gb|ABK90247.1| disulfide bond formation protein, DsbB family [Francisella novicida
           U112]
 gi|134049325|gb|ABO46396.1| putative disulfide bond formation protein [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|151571030|gb|EDN36684.1| disulfide bond formation protein [Francisella novicida GA99-3549]
 gi|151572486|gb|EDN38140.1| disulfide bond formation protein [Francisella novicida GA99-3548]
 gi|187712304|gb|ACD30601.1| disulfide bond formation protein, DsbB family [Francisella
           tularensis subsp. mediasiatica FSC147]
 gi|194322537|gb|EDX20017.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida FTE]
 gi|208744602|gb|EDZ90901.1| conserved hypothetical protein [Francisella novicida FTG]
 gi|282159653|gb|ADA79044.1| hypothetical protein NE061598_07835 [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 178

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 1/119 (0%)

Query: 12  SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
            G   +HY ++IL A+    +A  Q+L+HI+PG   Y   VF +H+YTW+ I S++ IL+
Sbjct: 59  HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 118

Query: 72  ISVL-MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
            ++  ++      K   S + ++AI L + L  AN ++  +ECG   C  +P  Y L N
Sbjct: 119 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 177


>gi|56708458|ref|YP_170354.1| hypothetical protein FTT_1410 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670929|ref|YP_667486.1| hypothetical protein FTF1410 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|254371082|ref|ZP_04987084.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254875302|ref|ZP_05248012.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56604950|emb|CAG46043.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110321262|emb|CAL09426.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. tularensis FSC198]
 gi|151569322|gb|EDN34976.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254841301|gb|EET19737.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 181

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 1/119 (0%)

Query: 12  SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
            G   +HY ++IL A+    +A  Q+L+HI+PG   Y   VF +H+YTW+ I S++ IL+
Sbjct: 62  HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 121

Query: 72  ISVL-MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
            ++  ++      K   S + ++AI L + L  AN ++  +ECG   C  +P  Y L N
Sbjct: 122 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 180


>gi|222824494|ref|YP_002576068.1| disulfide bond formation protein, DsbB family [Campylobacter lari
           RM2100]
 gi|222539715|gb|ACM64816.1| disulfide bond formation protein, DsbB family [Campylobacter lari
           RM2100]
          Length = 505

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 54/139 (38%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G+K +  + +++        +   +  H     D G+ +P+FG+H Y W
Sbjct: 55  IGVAALFVVRYGMKGKFLAFLLIATAFGLWQSFNHISGHAHRDLDQGFGLPIFGLHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAK----------SPVREIAIYLFVFLIFANFISTI 110
           + +    ++L + V+  F        K          S     A+ +  F++ +N     
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFGSFEKEMEGASFRKLSKFNLAAMVIVAFIVASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGPIPYSGQGDPVRFSL 193


>gi|213420991|ref|ZP_03354057.1| hypothetical protein Salmonentericaenterica_25887 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 136

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/116 (40%), Positives = 75/116 (64%), Gaps = 4/116 (3%)

Query: 18  HYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLML 77
           HY ++I+G+I T ++A+RQ+ +HI+PGD GY    FG+H YTW+LI S++II+ ++V++ 
Sbjct: 2   HYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLA 61

Query: 78  FDTAEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
             +             +  I  ++F+ LI AN IST+LECG  +C  NP  Y+LL+
Sbjct: 62  ISSMNAAFRSLNINPNLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLS 117


>gi|254368867|ref|ZP_04984880.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157121788|gb|EDO65958.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 181

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 1/119 (0%)

Query: 12  SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
            G   +HY ++IL A+    +A  Q+L+HI+PG   Y   VF +H+YTW+ I S++ IL+
Sbjct: 62  HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 121

Query: 72  ISVL-MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
            ++  ++      K   S + ++AI L + L  AN ++  +ECG   C  +P  Y L N
Sbjct: 122 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 180


>gi|89256043|ref|YP_513405.1| hypothetical protein FTL_0652 [Francisella tularensis subsp.
           holarctica LVS]
 gi|156502055|ref|YP_001428120.1| hypothetical protein FTA_0688 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167010201|ref|ZP_02275132.1| hypothetical protein Ftulh_05650 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254367383|ref|ZP_04983409.1| hypothetical protein FTHG_00611 [Francisella tularensis subsp.
           holarctica 257]
 gi|290954244|ref|ZP_06558865.1| hypothetical protein FtulhU_08389 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312364|ref|ZP_06803149.1| hypothetical protein FtulhU_08376 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|89143874|emb|CAJ79092.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. holarctica LVS]
 gi|134253199|gb|EBA52293.1| hypothetical protein FTHG_00611 [Francisella tularensis subsp.
           holarctica 257]
 gi|156252658|gb|ABU61164.1| putative disulfide bond formation protein [Francisella tularensis
           subsp. holarctica FTNF002-00]
          Length = 178

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 1/119 (0%)

Query: 12  SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
            G   +HY ++IL A+    +A  Q+L+HI+PG   Y   VF +H+YTW+ I S++ IL+
Sbjct: 59  HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 118

Query: 72  ISVL-MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
            ++  ++      K   S + ++AI L + L  AN ++  +ECG   C  +P  Y L N
Sbjct: 119 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFN 177


>gi|242310377|ref|ZP_04809532.1| disulfide bond formation protein [Helicobacter pullorum MIT
           98-5489]
 gi|239522775|gb|EEQ62641.1| disulfide bond formation protein [Helicobacter pullorum MIT
           98-5489]
          Length = 505

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 56/139 (40%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G+K ++ + +++ A      +  Q  +H +   D G+ + VFG+H Y W
Sbjct: 55  IGVMALFIVRYGMKGKYIAAILIMAAFGLYQSFAQYGMHAMRDLDQGFGLAVFGLHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKSPVRE----------IAIYLFVFLIFANFISTI 110
           + +    ++L + V+  F     +       +           ++ +   +I +N     
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFGEFDVEMAGKKFREWTKLSFASVVIVTLIIASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGIPPYAGQGDPVRFSL 193


>gi|15611609|ref|NP_223260.1| hypothetical protein jhp0542 [Helicobacter pylori J99]
 gi|4155079|gb|AAD06114.1| putative [Helicobacter pylori J99]
          Length = 490

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 56/133 (42%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     ++  ++VL+ F            + +++ A Y+F  ++ +N +   +  G  
Sbjct: 111 WALFVFFSVVALLAVLLFFAPNAQPFKDRLLNTLQKSAFYVFFIVVGSNAVQAFVSTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|208434515|ref|YP_002266181.1| DsbB-like protein [Helicobacter pylori G27]
 gi|208432444|gb|ACI27315.1| DsbB-like protein [Helicobacter pylori G27]
          Length = 490

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 56/133 (42%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     ++  ++VL+ F            + +++ A Y+F  ++ +N +   +  G  
Sbjct: 111 WALFVFFSVVALLAVLLFFAPNTQLSKDYPLNALQKSAFYVFFMVVGSNAVQAFISTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|307637283|gb|ADN79733.1| putative ATP/GTP binding protein [Helicobacter pylori 908]
 gi|325995873|gb|ADZ51278.1| putative ATP /GTP binding protein [Helicobacter pylori 2018]
 gi|325997468|gb|ADZ49676.1| hypothetical protein hp2017_0582 [Helicobacter pylori 2017]
          Length = 490

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 56/133 (42%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     +I  ++VL+ F            + +++ A Y+F  ++ +N I   +  G  
Sbjct: 111 WALFVFFSVITLLAVLLFFAPNAQPFKDRLLNTLQKSAFYVFFMVVGSNAIQAFVSTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|223039067|ref|ZP_03609358.1| disulfide bond formation protein, DsbB family [Campylobacter rectus
           RM3267]
 gi|222879706|gb|EEF14796.1| disulfide bond formation protein, DsbB family [Campylobacter rectus
           RM3267]
          Length = 515

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 56/141 (39%), Gaps = 14/141 (9%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           ++G+  +  L  G+K R+   ++ GA     +  R     +      G+   +FG H YT
Sbjct: 53  VVGVAGILILRYGLKARYIVAVLFGAAYGIFMTLRHASFSLYRDVGMGFGGDIFGAHTYT 112

Query: 60  WSLIFSLVIILFISVLMLFDT-----------AEIKVAKSPVREIAIYLFVFLIFANFIS 108
           W ++   V+++ + ++MLF                    +   +  I L +F+I +N + 
Sbjct: 113 WGILVYWVVVVAMGLMMLFAKDKVVSNDIARADTRVKPLNAYSKFVIALSLFVILSNAVQ 172

Query: 109 TILECG--LTQCFDNPTFYQL 127
            ++  G        +P    L
Sbjct: 173 ALISSGIPPYSGKGDPERISL 193


>gi|317009389|gb|ADU79969.1| dsbb-like protein [Helicobacter pylori India7]
          Length = 490

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 56/133 (42%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     ++  ++VL+ F          + + +++ A Y+F  ++ +N +      G  
Sbjct: 111 WALFVFFSVVALLAVLLFFAPNTQLFKDRSLNALQKSAFYIFFMVVGSNAVQAFFSTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|224418545|ref|ZP_03656551.1| disulfide bond formation protein, DsbB family [Helicobacter
           canadensis MIT 98-5491]
 gi|253826902|ref|ZP_04869787.1| disulfide bond formation protein, DsbB family [Helicobacter
           canadensis MIT 98-5491]
 gi|313142073|ref|ZP_07804266.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|253510308|gb|EES88967.1| disulfide bond formation protein, DsbB family [Helicobacter
           canadensis MIT 98-5491]
 gi|313131104|gb|EFR48721.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
          Length = 505

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 55/139 (39%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G K ++ + +++ A      +  Q  +H +   D G+ + VFG+H Y W
Sbjct: 55  IGVMALFIVRYGFKGKYVAAILVMAAFGLYQSFAQYGMHAMRDLDQGFGLAVFGLHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKSPVRE----------IAIYLFVFLIFANFISTI 110
           + I    ++L + V+  F     +       +           ++ +   +I +N     
Sbjct: 115 AEIVFWAVVLLLGVIFAFAPKFSEFEVEMAGKKVREWTKLSFASVVVVTLIIASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGVPPYAGQGDPVRFSL 193


>gi|317012409|gb|ADU83017.1| dsbb-like protein [Helicobacter pylori Lithuania75]
          Length = 490

 Score =  107 bits (268), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 56/133 (42%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     + + ++VL+ F          + + +++ A Y+F  ++ +N +      G  
Sbjct: 111 WALFVFFSVAVLLAVLLFFAPNTQLFKDDSLNALQKSAFYVFFMVVGSNAVQAFFSTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|109947915|ref|YP_665143.1| hypothetical protein Hac_1414 [Helicobacter acinonychis str.
           Sheeba]
 gi|109715136|emb|CAK00144.1| conserved hypothetical protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 490

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 56/133 (42%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     +++ +++L+ F            + +++ A Y+F  ++ +N +      G  
Sbjct: 111 WALFVFFSVVVSLALLLFFSPNIHNFKDRSLNMLQKSAFYIFFIVVGSNAMQAFFSTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|332678668|gb|AEE87797.1| Putative inner membrane protein [Francisella cf. novicida Fx1]
          Length = 178

 Score =  106 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 1/119 (0%)

Query: 12  SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
            G   +HY ++IL A+    +A  Q+L+HI+PG   Y   VF +H+YTW+ I S++ IL+
Sbjct: 59  HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 118

Query: 72  ISVL-MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
            ++  ++      K   S + ++AI L + L  AN ++  +ECG   C  +P  Y L N
Sbjct: 119 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCLSDPNSYWLFN 177


>gi|154174738|ref|YP_001408864.1| DsbB family disulfide bond formation protein [Campylobacter curvus
           525.92]
 gi|112803685|gb|EAU01029.1| disulfide bond formation protein, DsbB family [Campylobacter curvus
           525.92]
          Length = 504

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G+K R+ +++++ A      +     IH +   D G+ + VFG+H Y W
Sbjct: 55  IGVMALFIVRYGMKARYLAMILIMAGFGLWQSFAHYGIHAMRDLDQGFGLAVFGIHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110
           + +    ++L + V+  F        +                A  +   +I +N     
Sbjct: 115 AEVVFWAVVLLLGVIFFFAPKFSAFDEELDGEKFRRFTKASLCAFVIATLIIASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGVPPYYGQGDPVRFTL 193


>gi|283956195|ref|ZP_06373680.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792349|gb|EFC31133.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 508

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G+K ++ + +++        +      H     D G+ + VFG+H Y W
Sbjct: 55  IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110
           + +    ++L + V+  F                         A+ +   ++ +N     
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSLAAVVISAIVVASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193


>gi|159038828|ref|YP_001538081.1| hypothetical protein Sare_3287 [Salinispora arenicola CNS-205]
 gi|157917663|gb|ABV99090.1| conserved hypothetical protein [Salinispora arenicola CNS-205]
          Length = 197

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 19  YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
           Y + I+ A+     A RQ+L+HI+P D GY  PV G+H YTW+ I   V+++F  V ++F
Sbjct: 74  YGLSIVAAVAGAAYAARQILLHIVPPDPGYGSPVLGLHPYTWAFITFCVVLVFCGVSLVF 133

Query: 79  DTA--EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQC-FDNPTFYQLLN 129
                   V      ++ I LF+ ++ AN ++  ++ G       +PT Y++ +
Sbjct: 134 GRELVPRGVRFGWPSKVVIGLFLVIVAANLVAVFVQEGFHWFLPADPTRYEIFD 187


>gi|332184486|gb|AEE26740.1| Putative inner membrane protein [Francisella cf. novicida 3523]
          Length = 178

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)

Query: 12  SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
            G   +HY ++IL A+    +A  Q+L+HI+PG   Y   VF +H+YTW+ I S++ IL+
Sbjct: 59  HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 118

Query: 72  ISVL-MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
            ++  ++      K   + + ++AI L + L  AN ++  +ECG   C  +P  Y L +
Sbjct: 119 AAICGLITPNENKKKKLNILAKLAIILILILTLANTLNVFVECGPHLCPSDPNSYWLFS 177


>gi|305432553|ref|ZP_07401714.1| DsbB family disulfide bond formation protein [Campylobacter coli
           JV20]
 gi|5921219|emb|CAB56502.1| putative membrane protein CjaE [Campylobacter jejuni]
 gi|304444264|gb|EFM36916.1| DsbB family disulfide bond formation protein [Campylobacter coli
           JV20]
          Length = 505

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 51/139 (36%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G+K ++ + +++        +      H     D G+ + VFG+H Y W
Sbjct: 55  IGVIALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110
           + +    ++L + V+  F        K                A+ +   ++ +N     
Sbjct: 115 AEVVFWAVVLLLGVMFAFAPKFGSFDKELNGEKFRKFTKFSFAAVLISTLIVASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193


>gi|313836796|gb|EFS74510.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2]
 gi|314929796|gb|EFS93627.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1]
 gi|314972225|gb|EFT16322.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3]
          Length = 218

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 3/112 (2%)

Query: 19  YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
           Y + IL AI     + R +L+HI PGD GY     G+  YTW+ I  +++I F  V+M F
Sbjct: 100 YGVSILSAILGGAESARHILLHIQPGDPGYGSKALGLSTYTWAFITFVIVIAFCGVMMTF 159

Query: 79  DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT-QCFDNPTFYQL 127
                   V    +  + ++LF  ++ AN +  +   G       +P  Y+L
Sbjct: 160 APWLTPRGVKTHALSAVIMWLFALIVVANLVMIVFLEGFHVLLPGDPACYEL 211


>gi|57169011|ref|ZP_00368139.1| probable ATP /GTP binding protein Cj0017c [Campylobacter coli
           RM2228]
 gi|57019556|gb|EAL56246.1| probable ATP /GTP binding protein Cj0017c [Campylobacter coli
           RM2228]
          Length = 505

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 51/139 (36%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G+K ++ + +++        +      H     D G+ + VFG+H Y W
Sbjct: 55  IGVIALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110
           + +    ++L + V+  F        K                A+ +   ++ +N     
Sbjct: 115 AEVVFWAVVLLLGVMFAFAPKFGSFDKELNGEKFRKFTKFSFAAVLISTLIVASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193


>gi|261867547|ref|YP_003255469.1| DsbB family disulfide bond formation protein [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412879|gb|ACX82250.1| DsbB family disulfide bond formation protein [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 499

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 46/132 (34%), Gaps = 10/132 (7%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGD-LGYSIPVFGMHLYTW 60
           +   F   +  G K ++   +I  A+       R            G+   + G H Y+W
Sbjct: 51  VMFTF-LIIRYGPKPKYIGWVIFIAVFGIFAGFRHSSGSFAWDIHQGWWAEILGAHTYSW 109

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKSP------VREIAIYLFVFLIFANFISTILECG 114
            ++   V+++F++++  F                 + +  + +F+ +I  N +   +  G
Sbjct: 110 PMVIHAVVLIFVALIFCFTKDIYNFVSQSHKQLNILSKTCMAIFMIVICGNMVQAFISTG 169

Query: 115 --LTQCFDNPTF 124
                   NP  
Sbjct: 170 LPPNMGVSNPAR 181


>gi|293391425|ref|ZP_06635759.1| DsbB family disulfide bond formation protein [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951959|gb|EFE02078.1| DsbB family disulfide bond formation protein [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 499

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 46/132 (34%), Gaps = 10/132 (7%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGD-LGYSIPVFGMHLYTW 60
           +   F   +  G K ++   +I  A+       R            G+   + G H Y+W
Sbjct: 51  VMFTF-LIIRYGPKPKYIGWVIFIAVFGIFAGFRHSSGSFAWDIHQGWWAEILGAHTYSW 109

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKSP------VREIAIYLFVFLIFANFISTILECG 114
            ++   V+++F++++  F                 + +  + +F+ +I  N +   +  G
Sbjct: 110 PMVIHAVVLIFVALIFCFTKDIYNFVSQSHKQLNILSKTCMAIFMIVICGNMVQAFISTG 169

Query: 115 --LTQCFDNPTF 124
                   NP  
Sbjct: 170 LPPNMGVSNPAR 181


>gi|163857909|ref|YP_001632207.1| hypothetical protein Bpet3596 [Bordetella petrii DSM 12804]
 gi|163261637|emb|CAP43939.1| putative membrane protein [Bordetella petrii]
          Length = 192

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 4/124 (3%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           M G+G L N+  G    HY+++I  ++   + A  Q+L     G+     P+FG+ +++W
Sbjct: 55  MAGVGLLLNIRLGPSPLHYAMVIAASLGGLVAAGNQLLAQASAGEPPSGPPLFGLSIHSW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKSP----VREIAIYLFVFLIFANFISTILECGLT 116
           + +    ++ F  +++  D      A          I + LF+  I  N  +T LECGL 
Sbjct: 115 AFLAFCALLAFCVLMLAADRKWGDNALKKPVALPALIVMGLFLLAILVNVAATSLECGLG 174

Query: 117 QCFD 120
           +C  
Sbjct: 175 ECEG 178


>gi|282854664|ref|ZP_06263999.1| conserved hypothetical protein [Propionibacterium acnes J139]
 gi|282582246|gb|EFB87628.1| conserved hypothetical protein [Propionibacterium acnes J139]
 gi|314923761|gb|EFS87592.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1]
 gi|314966225|gb|EFT10324.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2]
 gi|314981991|gb|EFT26084.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3]
 gi|315090902|gb|EFT62878.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4]
 gi|315095115|gb|EFT67091.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1]
 gi|315104344|gb|EFT76320.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2]
 gi|327328107|gb|EGE69876.1| hypothetical protein HMPREF9341_01159 [Propionibacterium acnes
           HL103PA1]
          Length = 216

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 3/112 (2%)

Query: 19  YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
           Y + IL A+     + R +L+HI PGD GY    FG+  YTW+ I   ++I F  V+M F
Sbjct: 98  YGVSILSAVLGAAESARHILLHIQPGDPGYGSKAFGLSTYTWAFITFTIVIAFCGVMMTF 157

Query: 79  DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT-QCFDNPTFYQL 127
                   V    +  + ++LF  ++ AN +  +   G       +P  Y+L
Sbjct: 158 APWLTPRDVKAHAISTVIMWLFALIVVANLVMIVFLEGFHFLLPGDPACYEL 209


>gi|283953650|ref|ZP_06371181.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283794691|gb|EFC33429.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 508

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G+K ++ + +++        +      H     D G+ + VFG+H Y W
Sbjct: 55  IGVIALFIVRYGMKGKYLAALLIVTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110
           + +    ++L + V+  F                         A+ +   ++ +N     
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNSFEAELNGAKFRKYTKFSFAAVLISTIIVASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGVPPYLGQGDPVRFSL 193


>gi|315638055|ref|ZP_07893240.1| DsbB family disulfide bond formation protein [Campylobacter
           upsaliensis JV21]
 gi|315481903|gb|EFU72522.1| DsbB family disulfide bond formation protein [Campylobacter
           upsaliensis JV21]
          Length = 505

 Score =  104 bits (259), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 53/139 (38%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G+K ++ + +++        +      H     D G+ + VFG+H Y W
Sbjct: 55  IGVIALFIVRYGLKGKYLAALLIMTAFGLYQSFAHFGNHAHRDLDQGFGLAVFGIHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVA----------KSPVREIAIYLFVFLIFANFISTI 110
           + +    ++L + V+  F                   +    +A+ +  F++ +N     
Sbjct: 115 AEVVFWAVVLILGVIFAFAPKFSAFETEMAGEKFRQWTKFSFVAVLISTFIVASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGVPPYVGQGDPVRFSL 193


>gi|86152351|ref|ZP_01070561.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|315123630|ref|YP_004065634.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
 gi|85840648|gb|EAQ57900.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|315017352|gb|ADT65445.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
          Length = 508

 Score =  104 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G+K ++ + +++        +      H     D G+ + VFG+H Y W
Sbjct: 55  IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110
           + +    ++L + V+  F                         A+ +   ++ +N     
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193


>gi|57236929|ref|YP_178044.1| DsbB family disulfide bond formation protein [Campylobacter jejuni
           RM1221]
 gi|148926833|ref|ZP_01810512.1| putative ATP /GTP binding protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|205355757|ref|ZP_03222527.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|57165733|gb|AAW34512.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
           RM1221]
 gi|145844558|gb|EDK21665.1| putative ATP /GTP binding protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|205346534|gb|EDZ33167.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|315057458|gb|ADT71787.1| Putative ATP /GTP binding protein [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 508

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G+K ++ + +++        +      H     D G+ + VFG+H Y W
Sbjct: 55  IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110
           + +    ++L + V+  F                         A+ +   ++ +N     
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193


>gi|86154001|ref|ZP_01072203.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|85842539|gb|EAQ59752.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|307746980|gb|ADN90250.1| Putative ATP/GTP binding protein [Campylobacter jejuni subsp.
           jejuni M1]
          Length = 508

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G+K ++ + +++        +      H     D G+ + VFG+H Y W
Sbjct: 55  IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110
           + +    ++L + V+  F                         A+ +   ++ +N     
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193


>gi|86150526|ref|ZP_01068750.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|121613521|ref|YP_999737.1| DsbB family disulfide bond formation protein [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|167004713|ref|ZP_02270471.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|218561710|ref|YP_002343489.1| disulphide bond formation protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|85838978|gb|EAQ56243.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|87248957|gb|EAQ71919.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|112359416|emb|CAL34198.1| disulphide bond formation protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|284925320|gb|ADC27672.1| DsbB family disulfide bond formation protein [Campylobacter jejuni
           subsp. jejuni IA3902]
 gi|315929943|gb|EFV09100.1| disulfide bond formation protein DsbB family protein [Campylobacter
           jejuni subsp. jejuni 305]
          Length = 508

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G+K ++ + +++        +      H     D G+ + VFG+H Y W
Sbjct: 55  IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110
           + +    ++L + V+  F                         A+ +   ++ +N     
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193


>gi|88597728|ref|ZP_01100961.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|88190032|gb|EAQ94008.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
           subsp. jejuni 84-25]
          Length = 508

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G+K ++ + +++        +      H     D G+ + VFG+H Y W
Sbjct: 55  IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110
           + +    ++L + V+  F                         A+ +   ++ +N     
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193


>gi|157414338|ref|YP_001481594.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|157385302|gb|ABV51617.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|315931289|gb|EFV10258.1| disulfide bond formation protein DsbB family protein [Campylobacter
           jejuni subsp. jejuni 327]
          Length = 508

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G+K ++ + +++        +      H     D G+ + VFG+H Y W
Sbjct: 55  IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKV----------AKSPVREIAIYLFVFLIFANFISTI 110
           + +    ++L + V+  F                   +     A+ +   ++ +N     
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFETELNGEKFRKYTKFSFAAVLISTIIVASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193


>gi|153950977|ref|YP_001397289.1| DsbB family disulfide bond formation protein [Campylobacter jejuni
           subsp. doylei 269.97]
 gi|152938423|gb|ABS43164.1| disulfide bond formation protein, DsbB family [Campylobacter jejuni
           subsp. doylei 269.97]
          Length = 508

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G+K ++ + +++        +      H     D G+ + VFG+H Y W
Sbjct: 55  IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKV----------AKSPVREIAIYLFVFLIFANFISTI 110
           + +    ++L + V+  F                   +     A+ +   ++ +N     
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFETELNGEKFRKYTKFSFTAVLISAIIVASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193


>gi|315928445|gb|EFV07757.1| disulfide bond formation protein DsbB family protein [Campylobacter
           jejuni subsp. jejuni DFVF1099]
          Length = 495

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G+K ++ + +++        +      H     D G+ + VFG+H Y W
Sbjct: 42  IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 101

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110
           + +    ++L + V+  F                         A+ +   ++ +N     
Sbjct: 102 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAF 161

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 162 VSTGVPPYVGQGDPVRFSL 180


>gi|315100321|gb|EFT72297.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1]
          Length = 216

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 3/112 (2%)

Query: 19  YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
           Y + IL A+     + R +L+HI PGD GY    FG+  YTW+ I   ++I F  V+M F
Sbjct: 98  YGVSILSAVLGAAESARHILLHIQPGDPGYGSKTFGLSTYTWAFITFTIVIAFCGVMMTF 157

Query: 79  DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT-QCFDNPTFYQL 127
                   V    +  + ++LF  ++ AN +  +   GL      +P  Y+L
Sbjct: 158 APWLTPRGVKAHAISTVIMWLFALIVVANLVMIVFLEGLHFLLPGDPACYEL 209


>gi|57505823|ref|ZP_00371748.1| probable ATP /GTP binding protein Cj0017c [Campylobacter
           upsaliensis RM3195]
 gi|57015853|gb|EAL52642.1| probable ATP /GTP binding protein Cj0017c [Campylobacter
           upsaliensis RM3195]
          Length = 505

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G+K ++ + +++        +      H     D G+ + VFG+H Y W
Sbjct: 55  IGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110
           + +    ++L + V+  F                         A+ +   ++ +N     
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKIRKYTKFSFAAVLISTIIVASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGIPPYVGQGDPVRFSL 193


>gi|50842993|ref|YP_056220.1| hypothetical protein PPA1515 [Propionibacterium acnes KPA171202]
 gi|289426393|ref|ZP_06428136.1| conserved hypothetical protein [Propionibacterium acnes SK187]
 gi|289428753|ref|ZP_06430436.1| conserved hypothetical protein [Propionibacterium acnes J165]
 gi|50840595|gb|AAT83262.1| conserved membrane protein [Propionibacterium acnes KPA171202]
 gi|289153121|gb|EFD01839.1| conserved hypothetical protein [Propionibacterium acnes SK187]
 gi|289158151|gb|EFD06371.1| conserved hypothetical protein [Propionibacterium acnes J165]
 gi|313763569|gb|EFS34933.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1]
 gi|313773508|gb|EFS39474.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1]
 gi|313793962|gb|EFS41986.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1]
 gi|313801349|gb|EFS42600.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2]
 gi|313807971|gb|EFS46452.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2]
 gi|313811560|gb|EFS49274.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1]
 gi|313813382|gb|EFS51096.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1]
 gi|313816749|gb|EFS54463.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1]
 gi|313819540|gb|EFS57254.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2]
 gi|313822137|gb|EFS59851.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1]
 gi|313823629|gb|EFS61343.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
 gi|313825953|gb|EFS63667.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1]
 gi|313829420|gb|EFS67134.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2]
 gi|313831300|gb|EFS69014.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1]
 gi|313834911|gb|EFS72625.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1]
 gi|313839930|gb|EFS77644.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1]
 gi|314914723|gb|EFS78554.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4]
 gi|314919315|gb|EFS83146.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1]
 gi|314920775|gb|EFS84606.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3]
 gi|314924722|gb|EFS88553.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3]
 gi|314930454|gb|EFS94285.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1]
 gi|314954389|gb|EFS98795.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1]
 gi|314957478|gb|EFT01581.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1]
 gi|314962107|gb|EFT06208.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2]
 gi|314963686|gb|EFT07786.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1]
 gi|314968486|gb|EFT12584.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1]
 gi|314974176|gb|EFT18272.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1]
 gi|314976534|gb|EFT20629.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1]
 gi|314978903|gb|EFT22997.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2]
 gi|314984353|gb|EFT28445.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1]
 gi|314986543|gb|EFT30635.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2]
 gi|314990902|gb|EFT34993.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3]
 gi|315079536|gb|EFT51529.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2]
 gi|315081236|gb|EFT53212.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1]
 gi|315083602|gb|EFT55578.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2]
 gi|315087119|gb|EFT59095.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3]
 gi|315089292|gb|EFT61268.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1]
 gi|315095315|gb|EFT67291.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1]
 gi|315099196|gb|EFT71172.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2]
 gi|315106753|gb|EFT78729.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1]
 gi|315108995|gb|EFT80971.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2]
 gi|327328422|gb|EGE70184.1| hypothetical protein HMPREF9338_01439 [Propionibacterium acnes
           HL096PA2]
 gi|327329712|gb|EGE71468.1| hypothetical protein HMPREF9337_01776 [Propionibacterium acnes
           HL096PA3]
 gi|327334228|gb|EGE75942.1| hypothetical protein HMPREF9344_01129 [Propionibacterium acnes
           HL097PA1]
 gi|327444209|gb|EGE90863.1| hypothetical protein HMPREF9571_02340 [Propionibacterium acnes
           HL043PA2]
 gi|327444912|gb|EGE91566.1| hypothetical protein HMPREF9570_01974 [Propionibacterium acnes
           HL043PA1]
 gi|327446397|gb|EGE93051.1| hypothetical protein HMPREF9568_00979 [Propionibacterium acnes
           HL013PA2]
 gi|327452015|gb|EGE98669.1| hypothetical protein HMPREF9584_02221 [Propionibacterium acnes
           HL092PA1]
 gi|327454948|gb|EGF01603.1| hypothetical protein HMPREF9581_01136 [Propionibacterium acnes
           HL087PA3]
 gi|327457766|gb|EGF04421.1| hypothetical protein HMPREF9586_00342 [Propionibacterium acnes
           HL083PA2]
 gi|328752152|gb|EGF65768.1| hypothetical protein HMPREF9563_02421 [Propionibacterium acnes
           HL020PA1]
 gi|328755219|gb|EGF68835.1| hypothetical protein HMPREF9579_01246 [Propionibacterium acnes
           HL087PA1]
 gi|328758302|gb|EGF71918.1| hypothetical protein HMPREF9588_00942 [Propionibacterium acnes
           HL025PA2]
 gi|328760027|gb|EGF73608.1| hypothetical protein HMPREF9343_02235 [Propionibacterium acnes
           HL099PA1]
 gi|332675943|gb|AEE72759.1| putative transmembrane protein [Propionibacterium acnes 266]
          Length = 216

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 3/112 (2%)

Query: 19  YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
           Y + IL A+     + R +L+HI PGD GY    FG+  YTW+ I   ++I F  V+M F
Sbjct: 98  YGVSILSAVLGAAESARHILLHIQPGDPGYGSKAFGLSTYTWAFITFTIVIAFCGVMMTF 157

Query: 79  DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT-QCFDNPTFYQL 127
                   V    +  + ++LF  ++ AN +  +   GL      +P  Y+L
Sbjct: 158 APWLTPRGVKAHAISTVIMWLFALIVVANLVMIVFLEGLHFLLPGDPACYEL 209


>gi|223040679|ref|ZP_03610948.1| disulfide bond formation protein, DsbB family [Campylobacter rectus
           RM3267]
 gi|222878043|gb|EEF13155.1| disulfide bond formation protein, DsbB family [Campylobacter rectus
           RM3267]
          Length = 518

 Score =  102 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 50/139 (35%), Gaps = 12/139 (8%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGD--LGYSIPVFGMHLY 58
           +IG+  +F L  G K ++ S + + A     ++ R   +     D  +G+   +FG H Y
Sbjct: 49  LIGVLGIFILRYGAKIKYVSAVFICAAYGLFMSIRHTSLDGFAWDVGMGFGDAIFGAHTY 108

Query: 59  TWSLIFSLVIILFISVLMLFDTAEIKVAKS--------PVREIAIYLFVFLIFANFISTI 110
           TW       ++L + V++LF      + +               + +   +I +N     
Sbjct: 109 TWGAFVYWAVVLVMPVMLLFAPKVQNLDEQSESFNPFSAYTTAIVAISFAVIVSNAFQAF 168

Query: 111 LECG--LTQCFDNPTFYQL 127
              G         P    L
Sbjct: 169 FSTGVPPFSGKGEPERISL 187


>gi|115314520|ref|YP_763243.1| hypothetical protein FTH_0654 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|115129419|gb|ABI82606.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica OSU18]
          Length = 176

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 12  SGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILF 71
            G   +HY ++IL A+    +A  Q+L+HI+PG   Y   VF +H+YTW+ I S++ IL+
Sbjct: 62  HGNNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILY 121

Query: 72  ISVL-MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFY 125
            ++  ++      K   S + ++AI L + L  AN ++  +ECG   C  +P  Y
Sbjct: 122 AAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSY 176


>gi|237753331|ref|ZP_04583811.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375598|gb|EEO25689.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 505

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+   F +  GIK ++ S +++        +      H +   D G+ + VFG+H Y W
Sbjct: 55  IGVIAFFIIRYGIKGKYVSALLIVTAFGLYQSLAHFGNHAMRDLDQGFGLAVFGIHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKSPVRE----------IAIYLFVFLIFANFISTI 110
           + +    ++L + V+  F     +       +          IA+ +  F+I +N     
Sbjct: 115 AEVVFWAVVLLLGVIFAFAPKFGEFDTEMAGKKIRDWTKFSFIAVLITTFIIASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGIPPYAGQGDPVRFSL 193


>gi|217033540|ref|ZP_03438969.1| hypothetical protein HP9810_905g59 [Helicobacter pylori 98-10]
 gi|216944065|gb|EEC23496.1| hypothetical protein HP9810_905g59 [Helicobacter pylori 98-10]
          Length = 489

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 55/133 (41%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +           H L     G+S+ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYEGFYYTGSHALEDVGQGFSLAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     ++  + VL+ F          + + +++ A Y+F  ++ +N +   +  G  
Sbjct: 111 WALFVFFSVVAILGVLLFFAPNTQLFKDYSLNTLQKSAFYIFFIVVGSNAVQAFISTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYVGQSSPVRFSW 183


>gi|297379797|gb|ADI34684.1| DsbB-like protein [Helicobacter pylori v225d]
          Length = 490

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 58/133 (43%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     +++F++VL+ F          + + +++ A Y+F  ++ +N +      G  
Sbjct: 111 WALFVFFSVVVFLAVLLFFAPNTQLFKDYSLNTLQKSAFYVFFIVVGSNAVQAFFSTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|223039985|ref|ZP_03610267.1| disulfide bond formation protein, DsbB family [Campylobacter rectus
           RM3267]
 gi|222878705|gb|EEF13804.1| disulfide bond formation protein, DsbB family [Campylobacter rectus
           RM3267]
          Length = 504

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 53/139 (38%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYTW 60
           IG+  LF +  G+K ++ +++++        +     IH     D G+ + VFG+H Y W
Sbjct: 55  IGVMALFIVRYGLKAKYLAMLLVMTGFGLWQSFAHFGIHAHRDLDQGFGLAVFGIHTYFW 114

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKS----------PVREIAIYLFVFLIFANFISTI 110
           + +    +++ +  +  F      + +                A  +  F+I +N     
Sbjct: 115 AEVVFWAVVVLLGAIFFFAPKFSALEEEMGGDTIRKFGSFTRAAFIVCAFIIASNVFQAF 174

Query: 111 LECG--LTQCFDNPTFYQL 127
           +  G        +P  + L
Sbjct: 175 VSTGIPPYYGQGDPVRFTL 193


>gi|108563000|ref|YP_627316.1| hypothetical protein HPAG1_0575 [Helicobacter pylori HPAG1]
 gi|107836773|gb|ABF84642.1| DsbB-like protein [Helicobacter pylori HPAG1]
          Length = 490

 Score =  101 bits (251), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 57/132 (43%), Gaps = 6/132 (4%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60
           IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   W
Sbjct: 52  IGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQFW 111

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLTQ 117
           +L     +++F++VL+ F            + +++ A Y+F  ++ +N +   +  G   
Sbjct: 112 ALFVFFSVVVFLAVLLFFAPNTQPFKDHSLNALQKSAFYVFFIVVGSNAVQAFISTGPFP 171

Query: 118 CFD--NPTFYQL 127
                +P  +  
Sbjct: 172 YIGQSDPVRFSW 183


>gi|317177572|dbj|BAJ55361.1| DsbB-like protein [Helicobacter pylori F16]
          Length = 489

 Score =  101 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 55/133 (41%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +           H L     G+S+ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYEGFYYTGSHALEDVGQGFSLAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     ++  + VL+ F          + + +++ A Y+F  ++ +N +   +  G  
Sbjct: 111 WALFVFFSVVALLGVLLFFAPNTQLFKDYSLNTLQKSAFYIFFIVVGSNAVQAFISTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYVGQSSPVRFSW 183


>gi|153001068|ref|YP_001366749.1| disulfide bond formation protein DsbB [Shewanella baltica OS185]
 gi|151365686|gb|ABS08686.1| Disulphide bond formation protein DsbB [Shewanella baltica OS185]
          Length = 478

 Score = 99.9 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 62/133 (46%), Gaps = 9/133 (6%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           ++ +  L+ +  G+K ++ + ++   I    +A+    I++      G+S+ + G H YT
Sbjct: 50  LVALTALYIVRFGLKPKYIAALVWLGIYGAFMASVHTSINLGSDIGQGFSLKIMGAHTYT 109

Query: 60  WSLIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILEC 113
           W+L   + +++ +++LML       +    K     + ++A ++F+ +I  N +    + 
Sbjct: 110 WALFVFVTVLIVVALLMLTLGNKFPNNGYGKQPLDTLPKVACWIFLVVISGNIVQAFTQT 169

Query: 114 G--LTQCFDNPTF 124
           G       D+P  
Sbjct: 170 GPLPFVGQDSPGR 182


>gi|328907652|gb|EGG27416.1| conserved membrane protein [Propionibacterium sp. P08]
          Length = 188

 Score = 99.9 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 3/112 (2%)

Query: 19  YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
           Y + IL AI     + R +L+HI PGD GY     G+  YTW+ I  +++I F  V+M F
Sbjct: 70  YGVSILSAILGGAESARHILLHIQPGDPGYGSKALGLSTYTWAFITFVIVIAFCGVMMTF 129

Query: 79  DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT-QCFDNPTFYQL 127
                   V    +  + ++LF  ++ AN +  +   G       +P  Y+L
Sbjct: 130 APWLTPRGVKTHALSAVIMWLFALIVVANLVMIVFLEGFHVLLPGDPACYEL 181


>gi|260913349|ref|ZP_05919830.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260632580|gb|EEX50750.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 497

 Score = 99.9 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 47/132 (35%), Gaps = 10/132 (7%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGD-LGYSIPVFGMHLYTW 60
           +   F+  +  G K ++   +I   +       R            G+   + G H YTW
Sbjct: 51  VMFAFM-IVRYGPKPKYVGWIIFIGVFGMFAGFRHSSGSFAWDIHQGWWAEILGAHTYTW 109

Query: 61  SLIFSLVIILFISVLMLFDTAEIKV------AKSPVREIAIYLFVFLIFANFISTILECG 114
            ++   V+++F ++L LF               S + +  +  F+ ++  N +   +  G
Sbjct: 110 PIVIQGVVLVFTALLFLFTKNVYSFVSESYKPFSKLTKTTMVAFMVVVAGNIVQAFISTG 169

Query: 115 --LTQCFDNPTF 124
                   NPT 
Sbjct: 170 YPPNMGVGNPTR 181


>gi|254779412|ref|YP_003057517.1| putative disulfide oxidoreductase B (DsbB-like protein); putative
           membrane protein [Helicobacter pylori B38]
 gi|254001323|emb|CAX29308.1| Putative disulfide oxidoreductase B (DsbB-like protein); putative
           membrane protein [Helicobacter pylori B38]
          Length = 490

 Score = 99.1 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 56/133 (42%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     ++  +++L+ F            + +++ A Y+F  ++ +N +   +  G  
Sbjct: 111 WALFVFFSVVALLALLLFFAPNAQPFKDRLLNALQKSAFYVFFIVVGSNAVQAFVSTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|284007427|emb|CBA72860.1| conserved hypothetical protein [Arsenophonus nasoniae]
          Length = 151

 Score = 98.3 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 79/99 (79%), Positives = 86/99 (86%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           MIGIGFLFNLI GI QRHYSI+I  +ITTC+ ATRQVLIHILPGD GY   VFG+HLYTW
Sbjct: 53  MIGIGFLFNLILGINQRHYSIIIFSSITTCMTATRQVLIHILPGDPGYYSTVFGLHLYTW 112

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFV 99
           SL+FSL IILFISVLMLF+TAEI+VAKSP REIAIYL  
Sbjct: 113 SLLFSLAIILFISVLMLFNTAEIQVAKSPAREIAIYLCF 151


>gi|161613607|ref|YP_001587572.1| hypothetical protein SPAB_01330 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161362971|gb|ABX66739.1| hypothetical protein SPAB_01330 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|323220563|gb|EGA05014.1| hypothetical protein SEEM0047_12171 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
          Length = 132

 Score = 98.3 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/113 (39%), Positives = 74/113 (65%), Gaps = 4/113 (3%)

Query: 21  IMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDT 80
           ++I+G+I T ++A+RQ+ +HI+PGD GY    FG+H YTW+LI S++II+ ++V++   +
Sbjct: 1   MVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVILAISS 60

Query: 81  AEIKVA----KSPVREIAIYLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
             +          +  I  ++F+ LI AN IST+LECG  +C  NP  Y+LL+
Sbjct: 61  MNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLS 113


>gi|295131064|ref|YP_003581727.1| hypothetical protein HMPREF0675_4582 [Propionibacterium acnes
           SK137]
 gi|291377094|gb|ADE00949.1| conserved hypothetical protein [Propionibacterium acnes SK137]
          Length = 188

 Score = 97.9 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 3/112 (2%)

Query: 19  YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
           Y + IL A+     + R +L+HI PGD GY    FG+  YTW+ I   ++I F  V+M F
Sbjct: 70  YGVSILSAVLGAAESARHILLHIQPGDPGYGSKAFGLSTYTWAFITFTIVIAFCGVMMTF 129

Query: 79  DT--AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT-QCFDNPTFYQL 127
                   V    +  + ++LF  ++ AN +  +   GL      +P  Y+L
Sbjct: 130 APWLTPRGVKAHAISTVIMWLFALIVVANLVMIVFLEGLHFLLPGDPACYEL 181


>gi|223038973|ref|ZP_03609265.1| conserved hypothetical protein [Campylobacter rectus RM3267]
 gi|222879946|gb|EEF15035.1| conserved hypothetical protein [Campylobacter rectus RM3267]
          Length = 519

 Score = 97.9 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 51/130 (39%), Gaps = 13/130 (10%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHLYT 59
           ++G+  LF L  G + R+   +   A     +  R +   +    D+G    + G+  YT
Sbjct: 52  LVGLLGLFILRYGPRPRYVVAVFFIAAFGMHMGLRHLGNFVQLDVDMGLGASILGVRTYT 111

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAK------------SPVREIAIYLFVFLIFANFI 107
           W+ I    +++ +S+ ++F     ++              +   ++  YL   L+ +N +
Sbjct: 112 WAAIVYWAVVIVMSLFLIFIKKSAELNADFSGQRSVIKPFNAYGKVVFYLSFALVISNGV 171

Query: 108 STILECGLTQ 117
                 G+  
Sbjct: 172 QAFFTNGIPP 181


>gi|312882601|ref|ZP_07742341.1| membrane protein [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369761|gb|EFP97273.1| membrane protein [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 89

 Score = 97.9 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 44  GDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVF 100
           G  GY  P+FGMH YTW+ +     +L +++L++    E        S    +   L + 
Sbjct: 1   GTPGYGSPIFGMHYYTWAFVLFGATVLGVALLLILWNEEWNSQSFTMSGFGRLVCLLAIT 60

Query: 101 LIFANFISTILECGLTQCFDNPTFYQLLN 129
            +  NF+ST  ECG  +C  +P  Y L +
Sbjct: 61  AVALNFVSTFAECGPYECPADPVSYWLFS 89


>gi|308061927|gb|ADO03815.1| DsbB-like protein [Helicobacter pylori Cuz20]
          Length = 490

 Score = 97.2 bits (241), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 57/133 (42%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     +++ ++VL+ F          + + +++ A Y+F  ++ +N +      G  
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTQLFKDYSLNTLQKSAFYVFFIVVGSNAVQAFFSTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|317180366|dbj|BAJ58152.1| DsbB-like protein [Helicobacter pylori F32]
          Length = 490

 Score = 96.8 bits (240), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 56/133 (42%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++  A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLFMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     +++ ++VL+ F          + + +++ A Y+F  ++ +N +      G  
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTQLFKDDSLNTLQKSAFYIFFIVVGSNAVQAFFSTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|317181910|dbj|BAJ59694.1| DsbB-like protein [Helicobacter pylori F57]
          Length = 490

 Score = 96.8 bits (240), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 57/133 (42%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     +++ ++VL+ F          + + +++ A Y+F  ++ +N +      G  
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTPLFKNYSLNTLQKSAFYIFFIVVGSNAVQAFFSTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|261839577|gb|ACX99342.1| DsbB-like protein [Helicobacter pylori 52]
          Length = 490

 Score = 96.8 bits (240), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 56/133 (42%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---VREIAIYLFVFLIFANFISTILECGLT 116
           W+L     +++ ++VL+ F          P   +++ A Y+F  ++ +N +      G  
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTPLFKNYPLNTLQKSAFYIFFIVVGSNAVQAFFSTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|15645220|ref|NP_207390.1| hypothetical protein HP0595 [Helicobacter pylori 26695]
 gi|2313718|gb|AAD07664.1| predicted coding region HP0595 [Helicobacter pylori 26695]
          Length = 490

 Score = 96.8 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 58/133 (43%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     +++ ++VL+ F            + +++IA Y+F  ++ +N +   +  G  
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNAQPFKDHSLNALQKIAFYVFFMVVGSNAVQAFISTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|188527557|ref|YP_001910244.1| DsbB-like protein [Helicobacter pylori Shi470]
 gi|188143797|gb|ACD48214.1| DsbB-like protein [Helicobacter pylori Shi470]
          Length = 490

 Score = 96.4 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 56/133 (42%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTA---EIKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     +++ ++VL+ F            + +++ A Y+F  ++ +N +      G  
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNAQLFKDYPLNTLQKSAFYVFFIVVGSNAVQAFFSTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|317014016|gb|ADU81452.1| hypothetical protein HPGAM_03060 [Helicobacter pylori Gambia94/24]
          Length = 490

 Score = 96.4 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 57/133 (42%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGGHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     +++ ++VL+ F            + +++ A Y+F  ++ +N I   +  G  
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNAQPFKDRLLNTLQKSAFYVFFIVVGSNAIQAFVSTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|317010816|gb|ADU84563.1| hypothetical protein HPSA_02780 [Helicobacter pylori SouthAfrica7]
          Length = 490

 Score = 96.4 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 56/133 (42%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     +++ +++L+ F            + +++ A  +F  ++ +N I   +  G  
Sbjct: 111 WALFVFFSVVVLLALLLFFAPNTQPFKDRLLNALQKSAFCVFFIVVGSNAIQAFVSTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|308184378|ref|YP_003928511.1| putative disulfide oxidoreductase B (DsbB-like protein); putative
           membrane protein [Helicobacter pylori SJM180]
 gi|308060298|gb|ADO02194.1| putative disulfide oxidoreductase B (DsbB-like protein); putative
           membrane protein [Helicobacter pylori SJM180]
          Length = 490

 Score = 96.0 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 57/133 (42%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVA---KSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     +++ ++VL+ F            + +++ A Y+F  ++ +N +   +  G  
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTQPFKVRLLNTLQKSAFYVFFMVVGSNAVQAFISTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|261838162|gb|ACX97928.1| DsbB-like protein [Helicobacter pylori 51]
          Length = 490

 Score = 96.0 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 56/133 (42%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++  A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLFMAGSGLYESFYHTSSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     +++ ++VL+ F          + + +++ A Y+F  ++ +N +      G  
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTQLFKNYSLNTLQKSAFYVFFIVVGSNAVQAFFSTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|308063615|gb|ADO05502.1| DsbB-like protein [Helicobacter pylori Sat464]
          Length = 490

 Score = 95.6 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 58/133 (43%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +    +      H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     +++ ++VL+ F +        + + +++ A Y+F  ++ +N +      G  
Sbjct: 111 WALFVFFSVVVLLAVLLFFASNTQLFKDYSLNTLQKSAFYVFFIVVGSNAVQAFFSTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|315586720|gb|ADU41101.1| DsbB family protein [Helicobacter pylori 35A]
          Length = 489

 Score = 95.6 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 58/133 (43%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +           H L     G+++ + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYEGFYYTGSHALEDVGQGFALAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAE---IKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     +++F++VL+ F          + + +++ A Y+F  ++ +N +   +  G  
Sbjct: 111 WALFVFFSVVVFLAVLLFFAPNTPLFKDYSLNTLQKSAFYIFFIVVGSNAVQAFISTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 NP  +  
Sbjct: 171 PYVGQSNPVRFSW 183


>gi|332673607|gb|AEE70424.1| DsbB family protein [Helicobacter pylori 83]
          Length = 489

 Score = 95.6 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 59/133 (44%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +           H L     G+++P+ G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMAGSGLYEGFYYTGSHALEDVGQGFALPILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECG-- 114
           W+L     +++F++VL+ F          + + +++ A Y+F  ++ +N +   +  G  
Sbjct: 111 WALFVFFSVVVFLAVLLFFAPNTQLFKNYSLNTLQKSAFYIFFIVVGSNAVQAFISTGPL 170

Query: 115 LTQCFDNPTFYQL 127
                 NP  +  
Sbjct: 171 PYIGQSNPVRFSW 183


>gi|210134796|ref|YP_002301235.1| dsbb-like protein [Helicobacter pylori P12]
 gi|210132764|gb|ACJ07755.1| dsbb-like protein [Helicobacter pylori P12]
          Length = 490

 Score = 94.5 bits (234), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 55/133 (41%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++  A +    +      H L     G++  + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLFMASSGLYESFYHTGSHALEDVGQGFAFAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     +++ ++VL+ F            + +++ A Y+F  ++ +N +   +  G  
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTQLFKDYPLNALQKSAFYVFFMVVGSNAVQAFISTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYIGQSDPVRFSW 183


>gi|317179041|dbj|BAJ56829.1| DsbB-like protein [Helicobacter pylori F30]
          Length = 489

 Score = 94.5 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 58/133 (43%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +           H L     G+++P+ G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMASSGLYEGFYYTGSHALEDIGQGFALPILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     +++F+ VL+ F          + + +++ A Y+F  ++ +N +   +  G  
Sbjct: 111 WALFVFFSVVVFLGVLLFFAPNTQLFKNYSLNTLQKSAFYIFFIVVGSNAVQAFISTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYVGQSSPVRFSW 183


>gi|322380685|ref|ZP_08054830.1| disulfide bond formation protein [Helicobacter suis HS5]
 gi|321146895|gb|EFX41650.1| disulfide bond formation protein [Helicobacter suis HS5]
          Length = 569

 Score = 93.7 bits (232), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 52/133 (39%), Gaps = 7/133 (5%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60
           I +  LF L  G+K ++ ++M+L  +     +   +  H L     G+++ +F +H   W
Sbjct: 51  IALSGLFILRYGLKPKYIALMLLIIVGGLYQSFYHLGNHALEDVGQGFALTIFRLHTQFW 110

Query: 61  SLIFSLVIILFISVLMLFDT----AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           + +   +  L +  L+ F       +     +     A  +F  L+ +N +   +  G  
Sbjct: 111 AELVFWLAALVLGSLLFFAPNFNTQDHPRQLTRSNRWAFAIFSALVASNMLQAFISTGPF 170

Query: 117 QCF--DNPTFYQL 127
                 NP  +  
Sbjct: 171 PYLGHGNPIRFSW 183


>gi|322378597|ref|ZP_08053037.1| DsbB-like protein [Helicobacter suis HS1]
 gi|321149005|gb|EFX43465.1| DsbB-like protein [Helicobacter suis HS1]
          Length = 567

 Score = 93.7 bits (232), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 52/133 (39%), Gaps = 7/133 (5%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60
           I +  LF L  G+K ++ ++M+L  +     +   +  H L     G+++ +F +H   W
Sbjct: 49  IALSGLFILRYGLKPKYIALMLLIIVGGLYQSFYHLGNHALEDVGQGFALTIFRLHTQFW 108

Query: 61  SLIFSLVIILFISVLMLFDT----AEIKVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           + +   +  L +  L+ F       +     +     A  +F  L+ +N +   +  G  
Sbjct: 109 AELVFWLAALVLGSLLFFAPNFNTQDHPRQLTRSNRWAFAIFSALVASNMLQAFISTGPF 168

Query: 117 QCF--DNPTFYQL 127
                 NP  +  
Sbjct: 169 PYLGHGNPIRFSW 181


>gi|302206945|gb|ADL11287.1| Disulfide bond formation protein DsbB [Corynebacterium
           pseudotuberculosis C231]
 gi|308277199|gb|ADO27098.1| Disulfide bond formation protein DsbB [Corynebacterium
           pseudotuberculosis I19]
          Length = 496

 Score = 92.9 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 53/140 (37%), Gaps = 15/140 (10%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   +F L  G + R+   ++L A        R            G+   V G+H YT
Sbjct: 51  LIGALGVFILRYGARMRYVVTLLLVAFYYLYTTVRHWGGRANADLGQGFGDAVLGVHTYT 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAK------------SPVREIAIYLFVFLIFANFI 107
           W ++   V+I  +++ ++F   +  + K            SP  +    + + +  AN +
Sbjct: 111 WGILVYWVVIGVLAIGLIFIGKDKMLQKEFTSSELEVKKFSPATKFVAIVAIVITCANCV 170

Query: 108 STILECG--LTQCFDNPTFY 125
             ++  G        +P  +
Sbjct: 171 QFLIGNGIPPYAGAGDPARF 190


>gi|38234617|ref|NP_940384.1| hypothetical protein DIP2060 [Corynebacterium diphtheriae NCTC
           13129]
 gi|38200881|emb|CAE50586.1| Putative membrane protein [Corynebacterium diphtheriae]
          Length = 476

 Score = 92.2 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 50/140 (35%), Gaps = 15/140 (10%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   +F L  G + R+   ++L A        R            G+   V G+H YT
Sbjct: 51  LIGALGVFILRYGARMRYIVTLLLVAFYYLYTTVRHWGGRASADLGQGFGDAVLGVHTYT 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKS------------PVREIAIYLFVFLIFANFI 107
           W ++   V+I  +++ ++F   +  + +             P       + + +  +N +
Sbjct: 111 WGILVYWVVIGVLAIGLIFIGKDKALQQEFISSEAVVKDFGPATRFVAIVAIVITCSNCV 170

Query: 108 STILECG--LTQCFDNPTFY 125
             +   G        +P  +
Sbjct: 171 QFLFGNGIPPYAGAGDPARF 190


>gi|222824339|ref|YP_002575913.1| disulfide bond formation protein, DsbB family [Campylobacter lari
           RM2100]
 gi|222539560|gb|ACM64661.1| disulfide bond formation protein, DsbB family [Campylobacter lari
           RM2100]
          Length = 528

 Score = 92.2 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 49/139 (35%), Gaps = 15/139 (10%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG+  +  L  G + ++   + L A     +  R            G    + G H YT
Sbjct: 56  IIGVLGMLILRYGPQIKYIVCVFLFAGYGIYMGIRHTASWWQRDIGIGLGDKLVGAHTYT 115

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSPV------------REIAIYLFVFLIFANFI 107
           W+++    +++ + + +LF      + +  V             ++ I L   ++ +N  
Sbjct: 116 WAVVVYWCVVVVMGLALLFIRKNSSMMQDLVNEKISVKPLNGYSKLVIILSFIVVCSNAF 175

Query: 108 STILECG--LTQCFDNPTF 124
             ++  G        NP  
Sbjct: 176 QALIINGIPPYTGKSNPDR 194


>gi|289807693|ref|ZP_06538322.1| hypothetical protein Salmonellaentericaenterica_26102 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 121

 Score = 89.5 bits (221), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/94 (40%), Positives = 57/94 (60%), Gaps = 4/94 (4%)

Query: 40  HILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAEIKVA----KSPVREIAI 95
           HI+PGD GY    FG+H YTW+LI S++II+ ++V++   +             +  I  
Sbjct: 9   HIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLAISSMNAAFRSLNINPNLFSIVG 68

Query: 96  YLFVFLIFANFISTILECGLTQCFDNPTFYQLLN 129
           ++F+ LI AN IST+LECG  +C  NP  Y+LL+
Sbjct: 69  WVFLLLITANLISTVLECGGGECAANPVTYKLLS 102


>gi|319941675|ref|ZP_08015998.1| disulfide bond formation protein [Sutterella wadsworthensis
           3_1_45B]
 gi|319804796|gb|EFW01658.1| disulfide bond formation protein [Sutterella wadsworthensis
           3_1_45B]
          Length = 511

 Score = 88.7 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 48/139 (34%), Gaps = 13/139 (9%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60
           IG+  LF +  G K ++ + M++ A      + R +  H       G+ + + G+H   W
Sbjct: 64  IGVVALFMVRYGFKPKYLATMLVMAAVGLWSSFRHLGNHAARDVGQGFGLEIMGLHTQMW 123

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKSPVRE----------IAIYLFVFLIFANFISTI 110
           + I    +++   + +        +      +          IA  +  F++ +N     
Sbjct: 124 AEIVFWCVVMLFGLALFLAPRFDALIAEFKGKRWRPTTGFMQIAFGIVSFILASNAFQAA 183

Query: 111 LECG--LTQCFDNPTFYQL 127
              G        +P  +  
Sbjct: 184 WTTGLPPNWGQGDPWRFSW 202


>gi|308182757|ref|YP_003926884.1| DsbB-like protein [Helicobacter pylori PeCan4]
 gi|308064942|gb|ADO06834.1| DsbB-like protein [Helicobacter pylori PeCan4]
          Length = 489

 Score = 88.7 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 58/133 (43%), Gaps = 6/133 (4%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   L  +  G K ++ ++++L A +        V  H L     G++I + G+H   
Sbjct: 51  LIGAVALLVVRFGFKPKYIALLLLMAGSGLYEGFYYVGSHALEDVGQGFAIAILGLHTQF 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEI---KVAKSPVREIAIYLFVFLIFANFISTILECGLT 116
           W+L     +++ ++VL+ F          + + +++ A Y+F  ++ +N +   +  G  
Sbjct: 111 WALFVFFSVVVLLAVLLFFAPNTQLFKDYSLNTLQKSAFYVFFIVVGSNAVQAFISTGPF 170

Query: 117 QCFD--NPTFYQL 127
                 +P  +  
Sbjct: 171 PYVGQSSPVRFSW 183


>gi|300859255|ref|YP_003784238.1| hypothetical protein cpfrc_01838 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686709|gb|ADK29631.1| putative membrane protein [Corynebacterium pseudotuberculosis
           FRC41]
          Length = 376

 Score = 88.3 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 53/140 (37%), Gaps = 15/140 (10%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +IG   +F L  G + R+   ++L A        R            G+   V G+H YT
Sbjct: 51  LIGALGVFILRYGARMRYVVTLLLVAFYYLYTTVRHWGGRANADLGQGFGDAVLGVHTYT 110

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAK------------SPVREIAIYLFVFLIFANFI 107
           W ++   V+I  +++ ++F   +  + K            SP  +    + + +  AN +
Sbjct: 111 WGILVYWVVIGVLAIGLIFIGKDKMLQKEFTSSELEVKKFSPATKFVAIVAIVITCANCV 170

Query: 108 STILECG--LTQCFDNPTFY 125
             ++  G        +P  +
Sbjct: 171 QFLIGNGIPPYAGAGDPARF 190


>gi|308049255|ref|YP_003912821.1| disulfide bond formation protein DsbB [Ferrimonas balearica DSM
           9799]
 gi|307631445|gb|ADN75747.1| Disulfide bond formation protein DsbB [Ferrimonas balearica DSM
           9799]
          Length = 486

 Score = 87.5 bits (216), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 8/132 (6%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           ++ +  LF    G+K ++  +++L AI       R    HIL     G+   +FG+H Y 
Sbjct: 55  LVSLIALFITRYGLKPKYIGLLLLTAIYGLFAGYRHSSAHILRDIGQGFGPAIFGVHTYV 114

Query: 60  WSLIFSLVIILFISVLML-----FDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECG 114
           W ++  LV++LF  VL+L           K     + + A  +F+ +I  N +    + G
Sbjct: 115 WVMVVFLVVLLFAGVLLLLQGDKLVQWTEKTRWEGLNKAAANVFLVVIAFNIVQAFSQTG 174

Query: 115 --LTQCFDNPTF 124
                   +P  
Sbjct: 175 PAPFLGQGDPVR 186


>gi|302535716|ref|ZP_07288058.1| predicted protein [Streptomyces sp. C]
 gi|302444611|gb|EFL16427.1| predicted protein [Streptomyces sp. C]
          Length = 216

 Score = 84.9 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 8/118 (6%)

Query: 19  YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
           + + I+ A+    ++  QVL+HI+P D GY+  +FG+HLYTW+ I  L+ +L  +V ++ 
Sbjct: 95  WGVAIVSALIGSTVSASQVLMHIVPPDPGYAGALFGLHLYTWAAITFLLAVLAAAVNLVL 154

Query: 79  DTAEIKV-------AKSPVREIAIYLFVFLIFANFISTILECGLTQ-CFDNPTFYQLL 128
                 +       A        + +  F   +N ++  L  GL      +PT Y+  
Sbjct: 155 AREFQPLGAAQASPALRRAAGFTLAVLAFFAVSNLVACFLLQGLHWQMPGDPTGYRFF 212


>gi|167625924|ref|YP_001676218.1| disulfide bond formation protein DsbB [Shewanella halifaxensis
           HAW-EB4]
 gi|167355946|gb|ABZ78559.1| Disulphide bond formation protein DsbB [Shewanella halifaxensis
           HAW-EB4]
          Length = 478

 Score = 83.3 bits (205), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 63/133 (47%), Gaps = 9/133 (6%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           +I +  L+++  G+K ++ + ++   +    +A     I++      G+S+ + G H YT
Sbjct: 50  LIALTALYSVRYGLKPKYIAALVWLGVYGAFMAAVHTSINLGSDIGQGFSLKIMGAHTYT 109

Query: 60  WSLIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILEC 113
           W+L   +++++ +++LM        D A  K A  P+ + A  +F+ +I  N +    + 
Sbjct: 110 WALFVFVMVLVVVALLMFTLGNKFPDNAYGKKALDPLPKYAFIVFLVVIAGNIVQAFTQT 169

Query: 114 GLTQCF--DNPTF 124
           G       D+P  
Sbjct: 170 GPAPFIGQDSPGR 182


>gi|254384695|ref|ZP_05000033.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194343578|gb|EDX24544.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 214

 Score = 82.2 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 9/120 (7%)

Query: 19  YSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLF 78
           + + ++ A      + RQ  +HILPG  G    V G+HLY W+ I   + +  I V++ F
Sbjct: 74  WGLALVAATGGSFASWRQTALHILPGAKGQGAEVLGLHLYVWAWILFQLSVAAIGVVLAF 133

Query: 79  DTAEIKVAKSP--------VREIAIYLFVFLIFANFISTILECGLTQC-FDNPTFYQLLN 129
             A    A           V   A++     +  +  +  LE G      D+P  Y+  +
Sbjct: 134 AHATADRAIPTSGPGPYRAVGLFALWFLGAAVALSLAAVFLEQGFHWFLPDDPGRYEFFH 193


>gi|113971986|ref|YP_735779.1| disulfide bond formation protein DsbB [Shewanella sp. MR-4]
 gi|113886670|gb|ABI40722.1| Disulphide bond formation protein DsbB [Shewanella sp. MR-4]
          Length = 478

 Score = 82.2 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 61/133 (45%), Gaps = 9/133 (6%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           ++ +  L+ +  G+K ++ + ++   I    +A+    I++      G+S+ + G H YT
Sbjct: 50  LVALTALYIVRFGLKPKYIAALVWLGIYGAFMASVHTSINLGSDIGQGFSLKIMGAHTYT 109

Query: 60  WSLIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILEC 113
           W+L   +V+++ +++LML            K     + +IA  +F+ +I  N +    + 
Sbjct: 110 WALFVFVVVLIVVALLMLTLGNKFPSNGYGKQPLDTLPKIACGVFLVVISGNIVQAFTQT 169

Query: 114 G--LTQCFDNPTF 124
           G       D+P  
Sbjct: 170 GPLPFVGQDSPGR 182


>gi|114045799|ref|YP_736349.1| disulfide bond formation protein DsbB [Shewanella sp. MR-7]
 gi|113887241|gb|ABI41292.1| Disulphide bond formation protein DsbB [Shewanella sp. MR-7]
          Length = 478

 Score = 82.2 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 61/133 (45%), Gaps = 9/133 (6%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           ++ +  L+ +  G+K ++ + ++   I    +A+    I++      G+S+ + G H YT
Sbjct: 50  LVALTALYIVRFGLKPKYIAALVWLGIYGAFMASVHTSINLGSDIGQGFSLKIMGAHTYT 109

Query: 60  WSLIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILEC 113
           W+L   +V+++ +++LML            K     + +IA  +F+ +I  N +    + 
Sbjct: 110 WALFVFVVVLIVVALLMLTLGNKFPSNGYGKQPLDTLPKIACGVFLVVISGNIVQAFTQT 169

Query: 114 G--LTQCFDNPTF 124
           G       D+P  
Sbjct: 170 GPLPFVGQDSPGR 182


>gi|315452684|ref|YP_004072954.1| disulfide bond formation protein [Helicobacter felis ATCC 49179]
 gi|315131736|emb|CBY82364.1| disulfide bond formation protein [Helicobacter felis ATCC 49179]
          Length = 573

 Score = 81.0 bits (199), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 52/145 (35%), Gaps = 19/145 (13%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYTW 60
           IG+  LF L  G+K ++ +I++L        +      H L     G+++ + G+H   W
Sbjct: 52  IGLAGLFILRYGLKPKYLAILLLIVAGGLYQSFYHYGNHALEDVGQGFALSILGLHTQFW 111

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKS----------------PVREIAIYLFVFLIFA 104
           + +    ++L +  L+LF  +   +A+                      A  +   +   
Sbjct: 112 AHVVFWFVVLILGGLLLFAPSFQVLAQEGGVYAHGSRRTYRDLTKANNWAFLIVGVIAIT 171

Query: 105 NFISTILECGLTQ--CFDNPTFYQL 127
           N +   +  G        +P  +  
Sbjct: 172 NMVQAFISTGPFPYLGQGDPIRFSW 196


>gi|83269709|ref|YP_419000.1| Frizzled protein [Brucella melitensis biovar Abortus 2308]
 gi|237817269|ref|ZP_04596261.1| Frizzled protein [Brucella abortus str. 2308 A]
 gi|82939983|emb|CAJ13012.1| Frizzled protein [Brucella melitensis biovar Abortus 2308]
 gi|237788082|gb|EEP62298.1| Frizzled protein [Brucella abortus str. 2308 A]
          Length = 208

 Score = 80.6 bits (198), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 68  VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110
           WS++ +LV+I   +V M+          +          +  I     + +   N  S  
Sbjct: 128 WSILIALVLIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 188 VQCGVGQC 195


>gi|308049207|ref|YP_003912773.1| disulfide bond formation protein DsbB [Ferrimonas balearica DSM
           9799]
 gi|307631397|gb|ADN75699.1| Disulfide bond formation protein DsbB [Ferrimonas balearica DSM
           9799]
          Length = 487

 Score = 79.8 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 60/133 (45%), Gaps = 9/133 (6%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL-GYSIPVFGMHLYT 59
           ++ +  L+ +  G+K ++   ++   I    +A+    I++      G+S+ + G H YT
Sbjct: 52  LVALTALYIVRFGLKPKYIGALVWLGIYGAWMASVHTSINLGSDIGQGFSVKIMGAHTYT 111

Query: 60  WSLIFSLVIILFISVLMLF------DTAEIKVAKSPVREIAIYLFVFLIFANFISTILEC 113
           W+L+  +V+++ ++ LM+F                 + ++   +F+F+I  N +    + 
Sbjct: 112 WALLVFVVVLVVVAALMMFLGNRFPGKPTQTPGNPALVKVVASVFLFVISGNIVQAFTQT 171

Query: 114 G--LTQCFDNPTF 124
           G       D+P  
Sbjct: 172 GPPPFVGQDSPGR 184


>gi|110633609|ref|YP_673817.1| disulfide bond formation protein DsbB, putative [Mesorhizobium sp.
           BNC1]
 gi|110284593|gb|ABG62652.1| disulfide bond formation protein DsbB, putative [Chelativorans sp.
           BNC1]
          Length = 215

 Score = 78.3 bits (192), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 63/128 (49%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +    +G   R+    +L  +   +++ RQ L+ I P          VFG+H+  
Sbjct: 69  VCFGIMQQFRNGFSVRNTGFSLLFTVFLLVVSVRQTLLDIYPRPGHEYIGSAVFGLHMPV 128

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSPVREI--------AIYLFVFLI-FANFISTI 110
           WS++ +L +++  +  ++F + +  + ++ +  +        A+ L+V LI   NF S +
Sbjct: 129 WSVLIALALLIAFTFELIFWSGKNHMHEARLTGLPVIRGLATALSLYVILIGLVNFGSVV 188

Query: 111 LECGLTQC 118
           L+CG+ +C
Sbjct: 189 LQCGVGEC 196


>gi|213021900|ref|ZP_03336347.1| hypothetical protein Salmonelentericaenterica_03902 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 97

 Score = 77.5 bits (190), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 4/92 (4%)

Query: 37  VLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAEIKVA----KSPVRE 92
           +  HI+PGD GY    FG+H YTW+LI S++II+ ++V++   +             +  
Sbjct: 5   IFCHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLAISSMNAAFRSLNINPNLFS 64

Query: 93  IAIYLFVFLIFANFISTILECGLTQCFDNPTF 124
           I  ++F+ LI AN IST+LECG  +C  NP  
Sbjct: 65  IVGWVFLLLITANLISTVLECGGGECAANPVH 96


>gi|163844533|ref|YP_001622188.1| hypothetical protein BSUIS_B0362 [Brucella suis ATCC 23445]
 gi|163675256|gb|ABY39366.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 208

 Score = 77.1 bits (189), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 68  VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110
           WS++ +L +I   +V M+F         +          +  I     + +   N  S  
Sbjct: 128 WSILIALALIAAFAVQMMFWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 188 VQCGVGQC 195


>gi|23500110|ref|NP_699550.1| disulfide bond formation protein DsbB [Brucella suis 1330]
 gi|161620429|ref|YP_001594315.1| disulfide bond formation protein DsbB [Brucella canis ATCC 23365]
 gi|254702754|ref|ZP_05164582.1| disulfide bond formation protein DsbB [Brucella suis bv. 3 str.
           686]
 gi|23463704|gb|AAN33555.1| disulfide bond formation protein DsbB, putative [Brucella suis
           1330]
 gi|161337240|gb|ABX63544.1| disulfide bond formation protein DsbB [Brucella canis ATCC 23365]
          Length = 208

 Score = 76.8 bits (188), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 68  VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110
           WS++ +L +I   +V M+F         +          +  I     + +   N  S  
Sbjct: 128 WSILIALALIAAFAVQMMFWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 188 VQCGVGQC 195


>gi|260568339|ref|ZP_05838808.1| frizzled protein [Brucella suis bv. 4 str. 40]
 gi|261753349|ref|ZP_05997058.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|260155004|gb|EEW90085.1| frizzled protein [Brucella suis bv. 4 str. 40]
 gi|261743102|gb|EEY31028.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
          Length = 203

 Score = 76.4 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 63  VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 122

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110
           WS++ +L +I   +V M+F         +          +  I     + +   N  S  
Sbjct: 123 WSILIALALIAAFAVQMMFWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 182

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 183 VQCGVGQC 190


>gi|254699631|ref|ZP_05161459.1| Frizzled protein [Brucella suis bv. 5 str. 513]
 gi|261750095|ref|ZP_05993804.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261739848|gb|EEY27774.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
          Length = 203

 Score = 76.0 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 68  VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110
           WS++ +L +I   +V M+          +          +  I     + +   N  S  
Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 188 VQCGVGQC 195


>gi|254720565|ref|ZP_05182376.1| Frizzled protein [Brucella sp. 83/13]
 gi|306838068|ref|ZP_07470925.1| Frizzled protein [Brucella sp. NF 2653]
 gi|306406805|gb|EFM63027.1| Frizzled protein [Brucella sp. NF 2653]
          Length = 208

 Score = 76.0 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 68  VCFGIMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSPVRE---------IAIYLFVFLIFANFISTI 110
           WS++ +L +I   +V M+          + +++         I     + +   N  S  
Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTITQIKKYPVINGLGTILALYVLAVATINMASVF 187

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 188 VQCGVGQC 195


>gi|33592616|ref|NP_880260.1| hypothetical protein BP1525 [Bordetella pertussis Tohama I]
 gi|33572262|emb|CAE41814.1| putative membrane protein [Bordetella pertussis Tohama I]
 gi|332382033|gb|AEE66880.1| hypothetical protein BPTD_1507 [Bordetella pertussis CS]
          Length = 159

 Score = 75.6 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 42/107 (39%), Gaps = 12/107 (11%)

Query: 9   NLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVI 68
           N+  G    HY++++  A+     A  Q+L    P     + P  G     W+ +    +
Sbjct: 61  NVRMGPSPLHYAMVLAPALGGLTAAGWQLL---SPDAGAAAPPWQG-----WAFLLFGAM 112

Query: 69  ILFISVLMLFDTAEIKVAKSP----VREIAIYLFVFLIFANFISTIL 111
           +++ ++++  D      A          + + LF+  + AN   T L
Sbjct: 113 LVYCTLMLAADRKWGDNALKKPVALPGALVMGLFLVAVLANAAGTAL 159


>gi|265985598|ref|ZP_06098333.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|264664190|gb|EEZ34451.1| conserved hypothetical protein [Brucella sp. 83/13]
          Length = 203

 Score = 75.6 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 63  VCFGIMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 122

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSPVRE---------IAIYLFVFLIFANFISTI 110
           WS++ +L +I   +V M+          + +++         I     + +   N  S  
Sbjct: 123 WSILIALALIAAFAVQMMVWGGRHGQTITQIKKYPVINGLGTILALYVLAVATINMASVF 182

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 183 VQCGVGQC 190


>gi|306840813|ref|ZP_07473560.1| Frizzled protein [Brucella sp. BO2]
 gi|306289208|gb|EFM60457.1| Frizzled protein [Brucella sp. BO2]
          Length = 208

 Score = 75.6 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 68  VCFGIMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110
           WS++ +L +I   +V M+          +          +  I     + +   N  S  
Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTITQIKNHPVINGLGTILALYVLAVATINMASVF 187

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 188 VQCGVGQC 195


>gi|254695467|ref|ZP_05157295.1| Frizzled protein [Brucella abortus bv. 3 str. Tulya]
          Length = 208

 Score = 75.6 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 68  VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110
           WS++ +L +I   +V M+          +          +  I     + +   N  S  
Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 188 VQCGVGQC 195


>gi|62317726|ref|YP_223579.1| disulfide bond formation protein DsbB [Brucella abortus bv. 1 str.
           9-941]
 gi|189022981|ref|YP_001932722.1| Frizzled protein [Brucella abortus S19]
 gi|254691229|ref|ZP_05154483.1| Frizzled protein [Brucella abortus bv. 6 str. 870]
 gi|254699016|ref|ZP_05160844.1| Frizzled protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|254732463|ref|ZP_05191041.1| Frizzled protein [Brucella abortus bv. 4 str. 292]
 gi|256256416|ref|ZP_05461952.1| Frizzled protein [Brucella abortus bv. 9 str. C68]
 gi|297249776|ref|ZP_06933477.1| frizzled protein [Brucella abortus bv. 5 str. B3196]
 gi|62197919|gb|AAX76218.1| hypothetical DsbB, disulfide bond formation protein [Brucella
           abortus bv. 1 str. 9-941]
 gi|189021555|gb|ACD74276.1| Frizzled protein [Brucella abortus S19]
 gi|297173645|gb|EFH33009.1| frizzled protein [Brucella abortus bv. 5 str. B3196]
          Length = 208

 Score = 75.2 bits (184), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 68  VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110
           WS++ +L +I   +V M+          +          +  I     + +   N  S  
Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 188 VQCGVGQC 195


>gi|256015139|ref|YP_003105148.1| disulfide bond formation protein DsbB [Brucella microti CCM 4915]
 gi|256059423|ref|ZP_05449625.1| Frizzled protein [Brucella neotomae 5K33]
 gi|256111726|ref|ZP_05452710.1| Frizzled protein [Brucella melitensis bv. 3 str. Ether]
 gi|294853352|ref|ZP_06794024.1| frizzled protein [Brucella sp. NVSL 07-0026]
 gi|255997799|gb|ACU49486.1| disulfide bond formation protein DsbB [Brucella microti CCM 4915]
 gi|294819007|gb|EFG36007.1| frizzled protein [Brucella sp. NVSL 07-0026]
          Length = 208

 Score = 75.2 bits (184), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 68  VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110
           WS++ +L +I   +V M+          +          +  I     + +   N  S  
Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 188 VQCGVGQC 195


>gi|306845651|ref|ZP_07478220.1| Frizzled protein [Brucella sp. BO1]
 gi|306273972|gb|EFM55799.1| Frizzled protein [Brucella sp. BO1]
          Length = 208

 Score = 75.2 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 68  VCFGIMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110
           WS++ +L +I   +V M+        A +          +  I     + +   N  S  
Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQAIAQIKNYPVINGLGTILALYVLAIATINMASVF 187

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 188 VQCGVGQC 195


>gi|261215853|ref|ZP_05930134.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|260917460|gb|EEX84321.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
          Length = 203

 Score = 74.8 bits (183), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 63  VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 122

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110
           WS++ +L +I   +V M+          +          +  I     + +   N  S  
Sbjct: 123 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 182

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 183 VQCGVGQC 190


>gi|260544967|ref|ZP_05820788.1| frizzled protein [Brucella abortus NCTC 8038]
 gi|260756832|ref|ZP_05869180.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260760263|ref|ZP_05872611.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260763502|ref|ZP_05875834.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882648|ref|ZP_05894262.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260098238|gb|EEW82112.1| frizzled protein [Brucella abortus NCTC 8038]
 gi|260670581|gb|EEX57521.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260673923|gb|EEX60744.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260676940|gb|EEX63761.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260872176|gb|EEX79245.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
          Length = 203

 Score = 74.8 bits (183), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 63  VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 122

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110
           WS++ +L +I   +V M+          +          +  I     + +   N  S  
Sbjct: 123 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 182

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 183 VQCGVGQC 190


>gi|148558668|ref|YP_001257372.1| putative disulfide bond formation protein DsbB [Brucella ovis ATCC
           25840]
 gi|148369953|gb|ABQ62825.1| putative disulfide bond formation protein DsbB [Brucella ovis ATCC
           25840]
          Length = 208

 Score = 74.8 bits (183), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 68  VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110
           WS++ +L +I   +V M+          +          +  I     + +   N  S  
Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 187

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 188 VQCGVGQC 195


>gi|261323389|ref|ZP_05962586.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|265993198|ref|ZP_06105755.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|261299369|gb|EEY02866.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|262764068|gb|EEZ10100.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
          Length = 203

 Score = 74.8 bits (183), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 63  VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 122

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110
           WS++ +L +I   +V M+          +          +  I     + +   N  S  
Sbjct: 123 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 182

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 183 VQCGVGQC 190


>gi|326410532|gb|ADZ67596.1| Frizzled protein [Brucella melitensis M28]
 gi|326553823|gb|ADZ88462.1| Frizzled protein [Brucella melitensis M5-90]
          Length = 177

 Score = 74.1 bits (181), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 37  VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 96

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110
           WS++ +L +I   +V M+          +          +  I     + +   N  S  
Sbjct: 97  WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 156

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 157 VQCGVGQC 164


>gi|265999159|ref|ZP_05465215.2| disulfide bond formation protein DsbB [Brucella melitensis bv. 2
           str. 63/9]
 gi|263092468|gb|EEZ16721.1| disulfide bond formation protein DsbB [Brucella melitensis bv. 2
           str. 63/9]
          Length = 180

 Score = 74.1 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 40  VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 99

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110
           WS++ +L +I   +V M+          +          +  I     + +   N  S  
Sbjct: 100 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 159

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 160 VQCGVGQC 167


>gi|225628802|ref|ZP_03786836.1| Frizzled protein [Brucella ceti str. Cudo]
 gi|254711589|ref|ZP_05173400.1| Frizzled protein [Brucella pinnipedialis B2/94]
 gi|254712186|ref|ZP_05173997.1| Frizzled protein [Brucella ceti M644/93/1]
 gi|254715256|ref|ZP_05177067.1| Frizzled protein [Brucella ceti M13/05/1]
 gi|256029775|ref|ZP_05443389.1| Frizzled protein [Brucella pinnipedialis M292/94/1]
 gi|256157948|ref|ZP_05455866.1| Frizzled protein [Brucella ceti M490/95/1]
 gi|256253093|ref|ZP_05458629.1| Frizzled protein [Brucella ceti B1/94]
 gi|260167119|ref|ZP_05753930.1| Frizzled protein [Brucella sp. F5/99]
 gi|261756518|ref|ZP_06000227.1| frizzled protein [Brucella sp. F5/99]
 gi|225616648|gb|EEH13696.1| Frizzled protein [Brucella ceti str. Cudo]
 gi|261736502|gb|EEY24498.1| frizzled protein [Brucella sp. F5/99]
          Length = 203

 Score = 73.3 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 16/128 (12%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 68  VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110
           WS++     I   +V M+          +          +  I     + +   N  S  
Sbjct: 128 WSIL-----IAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 182

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 183 VQCGVGQC 190


>gi|90578768|ref|ZP_01234578.1| hypothetical protein VAS14_03663 [Vibrio angustum S14]
 gi|90439601|gb|EAS64782.1| hypothetical protein VAS14_03663 [Vibrio angustum S14]
          Length = 386

 Score = 72.9 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 6/91 (6%)

Query: 36  QVLIHILPGDL-GYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAE-----IKVAKSP 89
              +HI      G+   + G H YTW +   +  +L +S+L+ F   +      +V    
Sbjct: 2   HSSVHIGQDIGQGFGGLILGAHAYTWGVFLFIANLLIMSLLIGFSNEDSLKNTTRVRWGT 61

Query: 90  VREIAIYLFVFLIFANFISTILECGLTQCFD 120
             +++ Y F+ +I  N I    + G      
Sbjct: 62  FHKVSGYSFIIVISLNVIQAFTQVGPPPYIG 92


>gi|261216982|ref|ZP_05931263.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261220196|ref|ZP_05934477.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261319212|ref|ZP_05958409.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261319852|ref|ZP_05959049.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|265986787|ref|ZP_06099344.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265996457|ref|ZP_06109014.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|260918780|gb|EEX85433.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|260922071|gb|EEX88639.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261292542|gb|EEX96038.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261298435|gb|EEY01932.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|262550754|gb|EEZ06915.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|264658984|gb|EEZ29245.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
          Length = 198

 Score = 72.5 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 16/128 (12%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 63  VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 122

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSP---------VREIAIYLFVFLIFANFISTI 110
           WS++     I   +V M+          +          +  I     + +   N  S  
Sbjct: 123 WSIL-----IAAFAVQMMVWGGRHGQTIAQIKNHPVINGLGTILALYVLAVATINMASVF 177

Query: 111 LECGLTQC 118
           ++CG+ QC
Sbjct: 178 VQCGVGQC 185


>gi|89073636|ref|ZP_01160158.1| putative ATP /GTP binding protein [Photobacterium sp. SKA34]
 gi|89050663|gb|EAR56149.1| putative ATP /GTP binding protein [Photobacterium sp. SKA34]
          Length = 382

 Score = 69.4 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 40/95 (42%), Gaps = 8/95 (8%)

Query: 39  IHILPGDL-GYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAE-----IKVAKSPVRE 92
           +H+      G+   + G H YTW ++  +  +L +S+L+ F   +      ++      +
Sbjct: 1   MHLGQDIGQGFGGLILGAHAYTWGVLLFIANLLIMSLLLGFSNEDTLKNTTQIQWGNFHK 60

Query: 93  IAIYLFVFLIFANFISTILECG--LTQCFDNPTFY 125
            + Y F+ +IF N I    + G        +P  +
Sbjct: 61  FSGYSFIIVIFLNVIQAFTQVGPPPYIGQGSPQSF 95


>gi|30025000|gb|AAO61477.1| unknown [Legionella pneumophila]
          Length = 80

 Score = 67.5 bits (164), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/64 (45%), Positives = 42/64 (65%)

Query: 2  IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
          +G+ F+ NL+ GI+  HY +M+L  +    I+ RQ+ IH+ PGD GY   +FG+HLYTWS
Sbjct: 17 VGLCFVMNLMLGIRASHYGLMLLATLLGLSISVRQMYIHLTPGDPGYGGLIFGLHLYTWS 76

Query: 62 LIFS 65
           I  
Sbjct: 77 AIIF 80


>gi|33595870|ref|NP_883513.1| hypothetical protein BPP1197 [Bordetella parapertussis 12822]
 gi|33600400|ref|NP_887960.1| hypothetical protein BB1414 [Bordetella bronchiseptica RB50]
 gi|33565949|emb|CAE36499.1| putative membrane protein [Bordetella parapertussis]
 gi|33567999|emb|CAE31912.1| putative membrane protein [Bordetella bronchiseptica RB50]
          Length = 159

 Score = 64.8 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 43/107 (40%), Gaps = 12/107 (11%)

Query: 9   NLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVI 68
           N+  G    HY++++  A+     A  Q+L    P     + P  G     W+ +    +
Sbjct: 61  NVRMGPSPLHYAMVLAPALGGLAAAGWQLL---SPEAGAAAPPWQG-----WAFLLFGAM 112

Query: 69  ILFISVLMLFDTAEIKVAKSP----VREIAIYLFVFLIFANFISTIL 111
           +++ ++++  D      A          + + LF+  + AN   T+L
Sbjct: 113 LVYCTLMLAADRKWGDNALKKPVALPGALVMGLFLVAVLANAAGTVL 159


>gi|17989236|ref|NP_541869.1| disulfide bond formation protein B [Brucella melitensis bv. 1 str.
           16M]
 gi|256043270|ref|ZP_05446207.1| disulfide bond formation protein B [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|260564479|ref|ZP_05834964.1| frizzled protein [Brucella melitensis bv. 1 str. 16M]
 gi|265989697|ref|ZP_06102254.1| disulfide bond formation protein DsbB [Brucella melitensis bv. 1
           str. Rev.1]
 gi|17985096|gb|AAL54133.1| disulfide bond formation protein b [Brucella melitensis bv. 1 str.
           16M]
 gi|260152122|gb|EEW87215.1| frizzled protein [Brucella melitensis bv. 1 str. 16M]
 gi|263000366|gb|EEZ13056.1| disulfide bond formation protein DsbB [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 242

 Score = 62.1 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 2/102 (1%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 68  VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127

Query: 60  WSLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFL 101
           WS++ +L +I   +V M+          + ++ +   + + L
Sbjct: 128 WSILIALALIAAFAVQMMVWGGRHGQTIAQIKNLRSSMVLAL 169


>gi|312881155|ref|ZP_07740953.1| hypothetical protein VIBC2010_08138 [Vibrio caribbenthicus ATCC
          BAA-2122]
 gi|309371047|gb|EFP98501.1| hypothetical protein VIBC2010_08138 [Vibrio caribbenthicus ATCC
          BAA-2122]
          Length = 90

 Score = 57.1 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 18/43 (41%), Positives = 28/43 (65%)

Query: 1  MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP 43
          M+  GFL N+  G  QRHY +++LGA+     A RQ+ +H++P
Sbjct: 48 MVMFGFLLNVKYGPTQRHYGVILLGALFGAATALRQISLHVIP 90


>gi|254706112|ref|ZP_05167940.1| disulfide bond formation protein DsbB [Brucella pinnipedialis
           M163/99/10]
          Length = 130

 Score = 53.7 bits (128), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 2   IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLG--YSIPVFGMHLYT 59
           +  G +  L  G   R   I +L AI   II+ RQ L+ I P          VFG+H+  
Sbjct: 68  VCFGVMLQLRYGPSFRFSGIGLLFAIVLLIISVRQTLLDIYPRPGHEYIGSTVFGLHMPV 127

Query: 60  WSL 62
           WS+
Sbjct: 128 WSI 130


>gi|207091994|ref|ZP_03239781.1| hypothetical protein HpylHP_02818 [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 375

 Score = 43.3 bits (101), Expect = 0.011,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%), Gaps = 2/48 (4%)

Query: 82  EIKVAKSPVREIAIYLFVFLIFANFISTILECGLTQCFD--NPTFYQL 127
               + + +++ A Y+F  ++ +N I   +  G        +P  +  
Sbjct: 21  FKDYSLNTLQKSAFYVFFIVVGSNAIQAFVSTGPFPYIGQSDPVRFSW 68


>gi|207092821|ref|ZP_03240608.1| hypothetical protein HpylHP_08243 [Helicobacter pylori
          HPKX_438_AG0C1]
          Length = 98

 Score = 39.4 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 1  MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDL 46
          +IG   L  +  G K ++ ++++L A +    +      H L    
Sbjct: 51 LIGAVALLVVRFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVG 96


>gi|229496141|ref|ZP_04389861.1| putative membrane protein [Porphyromonas endodontalis ATCC 35406]
 gi|229316719|gb|EEN82632.1| putative membrane protein [Porphyromonas endodontalis ATCC 35406]
          Length = 476

 Score = 36.7 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 39/113 (34%), Gaps = 18/113 (15%)

Query: 21  IMILGAITTCIIATRQVLIHILPG------------DLGYSIPVFGMHLYTWSLIFSLVI 68
           I   G     I A+ +    +LPG              GY I  +  H +  +    L+ 
Sbjct: 164 IAFFGGAAGMIAASTKSKGQVLPGVAIATALMPPLCTAGYGIATWQWHFFFGAFYLFLIN 223

Query: 69  ILFISVL------MLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECGL 115
            +FI++       +L    ++ + K   R++   L    I     S  L  GL
Sbjct: 224 SVFIALATYLMVRLLRFPKKVFLDKERGRKVHRILITIAICTILPSLYLSVGL 276


>gi|255039060|ref|YP_003089681.1| putative bifunctional cbb3-type cytochrome c oxidase subunit I/II
           [Dyadobacter fermentans DSM 18053]
 gi|254951816|gb|ACT96516.1| cytochrome c oxidase, cbb3-type, subunit I [Dyadobacter fermentans
           DSM 18053]
          Length = 701

 Score = 36.7 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 33/98 (33%), Gaps = 3/98 (3%)

Query: 14  IKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFIS 73
           I+  H + +I   +           +  +     +S  +   H + W  I     I   S
Sbjct: 53  IRPLHTNAVIFAFVGNGFFTGLYYSVPRVLRTPIWSPALSRFHFWAWQAIILGAAI---S 109

Query: 74  VLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111
           + M F T++         +IAI +       N I T +
Sbjct: 110 LPMGFTTSKEYAELEWPFDIAIAVVWVSALVNIIMTTI 147


>gi|311746218|ref|ZP_07720003.1| cytochrome c oxidase, Cbb3-type, subunit I/II [Algoriphagus sp.
           PR1]
 gi|126576448|gb|EAZ80726.1| cytochrome c oxidase, Cbb3-type, subunit I/II [Algoriphagus sp.
           PR1]
          Length = 710

 Score = 36.3 bits (83), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 14  IKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFIS 73
           I+  H + +I   +   I A     +  L     ++  +   H Y W LI     I   +
Sbjct: 58  IRPLHTNAVIFAFVGNAIFAGVYYSMPRLLKTPMWNKTLSWFHFYGWQLIILAAAI---T 114

Query: 74  VLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111
           + +   T++         +IAI L      AN I T++
Sbjct: 115 LPLGLTTSKEYAELEWPIDIAIALVWVAFGANMIGTLI 152


>gi|321472581|gb|EFX83550.1| hypothetical protein DAPPUDRAFT_315330 [Daphnia pulex]
          Length = 393

 Score = 35.9 bits (82), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 52  VFGMHLYTWSLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFI 107
           + G  +  W L    + I+ I+VL+     +   A+  VR +A+ L +  +  NF 
Sbjct: 330 LLGHIINGWILFLFALSIILIAVLLFL-NYDEGNARPWVRRLALALLIISVITNFF 384


>gi|300313812|ref|YP_003777904.1| hypothetical protein Hsero_4530 [Herbaspirillum seropedicae SmR1]
 gi|300076597|gb|ADJ65996.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 195

 Score = 35.9 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 57/133 (42%), Gaps = 22/133 (16%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           + G+GF+ NL  G+K  HY + +LGA+ T +IA RQ+ +  +         +    +  +
Sbjct: 59  LTGMGFMKNLCQGVKSAHYGVALLGALLTGLIALRQLWMQPV-------AAMLSQPVCLF 111

Query: 61  SLIFSLVIILFISVLM---------------LFDTAEIKVAKSPVREIAIYLFVFLIFAN 105
           + +F+LV I+ I+ L+                 +  + K      R +   +F+  +   
Sbjct: 112 AALFALVAIIVIACLLGVKSAEYPGTLLLLQTAEATDEKHGVPWGRILVCAVFIATVAVT 171

Query: 106 FISTILECGLTQC 118
              +++ C    C
Sbjct: 172 LSGSMINCTSATC 184


>gi|150021419|ref|YP_001306773.1| permease YjgP/YjgQ family protein [Thermosipho melanesiensis BI429]
 gi|149793940|gb|ABR31388.1| permease YjgP/YjgQ family protein [Thermosipho melanesiensis BI429]
          Length = 1096

 Score = 35.5 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 9/106 (8%)

Query: 4   IGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP-GDLGYSIPVFGMHLYTWSL 62
           +G   +L+ G+K + +S++   AI             I   G      PV          
Sbjct: 287 LGVPLSLLFGLKSKSWSVIFTFAIVILYQG---SGAWISAMGKENLLNPVLAAWFPNLVF 343

Query: 63  IFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFIS 108
           I      + + + ++ DT      +  + +  I +F+ +I  N  S
Sbjct: 344 IS-----VGLFLFLMLDTPFAYKLRELLSKFMIVIFLIVISTNVFS 384


>gi|146300630|ref|YP_001195221.1| sulfatase [Flavobacterium johnsoniae UW101]
 gi|146155048|gb|ABQ05902.1| sulfatase [Flavobacterium johnsoniae UW101]
          Length = 712

 Score = 35.5 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 36/106 (33%), Gaps = 13/106 (12%)

Query: 6   FLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFS 65
           F+ N        +  + +L A+   + + + +          Y   +  +      ++  
Sbjct: 71  FVSNSKYNKPSGYIILGLLTALFLYVASGKSIFDE-------YGGALPRI------ILIF 117

Query: 66  LVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111
           + I   +  L LF        +  +    I+L+V LI  N +S   
Sbjct: 118 IGIKTALFALFLFLPKWKNKIRFWLFSFVIFLYVLLILQNGLSEFF 163


>gi|325685443|gb|EGD27542.1| membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072]
          Length = 1297

 Score = 35.2 bits (80), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 48/107 (44%), Gaps = 5/107 (4%)

Query: 2    IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
            +GI  +    S ++  +    ILG +    I++  +   ++ G +G S   + +  +T+ 
Sbjct: 1128 VGIALILITRSLLQPIY----ILGTLLLAYISSLSITRWVVSGVMGRSTLAWNVPFFTFI 1183

Query: 62   LIFSLVIILFISVLMLF-DTAEIKVAKSPVREIAIYLFVFLIFANFI 107
            ++ +L +   I V+M + D+    +  + + +    +   +I A  I
Sbjct: 1184 MLIALGVDYSIFVMMRYRDSDPHALPSARILKACTAIGTVVISAVVI 1230


>gi|313124478|ref|YP_004034737.1| rnd superfamily resistance-nodulation-cell division:proton (h+)
            antiporter [Lactobacillus delbrueckii subsp. bulgaricus
            ND02]
 gi|312281041|gb|ADQ61760.1| RND superfamily resistance-nodulation-cell division:proton (H+)
            antiporter [Lactobacillus delbrueckii subsp. bulgaricus
            ND02]
          Length = 1297

 Score = 35.2 bits (80), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 48/107 (44%), Gaps = 5/107 (4%)

Query: 2    IGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWS 61
            +GI  +    S ++  +    ILG +    I++  +   ++ G +G S   + +  +T+ 
Sbjct: 1128 VGIALILITRSLLQPIY----ILGTLLLAYISSLSITRWVVSGVMGRSTLAWNVPFFTFI 1183

Query: 62   LIFSLVIILFISVLMLF-DTAEIKVAKSPVREIAIYLFVFLIFANFI 107
            ++ +L +   I V+M + D+    +  + + +    +   +I A  I
Sbjct: 1184 MLIALGVDYSIFVMMRYRDSDPHALPSARILKACTAIGTVVISAVVI 1230


>gi|58337744|ref|YP_194329.1| PTS enzyme IIABC [Lactobacillus acidophilus NCFM]
 gi|227904393|ref|ZP_04022198.1| protein-N(pi)-phosphohistidine--sugar phosphotransferase
           [Lactobacillus acidophilus ATCC 4796]
 gi|58255061|gb|AAV43298.1| PTS enzyme IIABC [Lactobacillus acidophilus NCFM]
 gi|227867845|gb|EEJ75266.1| protein-N(pi)-phosphohistidine--sugar phosphotransferase
           [Lactobacillus acidophilus ATCC 4796]
          Length = 734

 Score = 34.8 bits (79), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 40/87 (45%), Gaps = 5/87 (5%)

Query: 14  IKQRHYSIMILGAITTCIIATR-QVLIHILPGDLGYSIPVF----GMHLYTWSLIFSLVI 68
             ++ ++   +G+     IA      ++ +PG   + IP F    G+++  +  + SL++
Sbjct: 476 PHKKAFAFASVGSAFGGAIAAACHAGMYTMPGGGIFGIPAFINPKGINMQFYGFLISLLV 535

Query: 69  ILFISVLMLFDTAEIKVAKSPVREIAI 95
            + +S ++     +  V  +P  ++ +
Sbjct: 536 AIVVSFVLTMIFGDTVVPSAPKAKVQV 562


>gi|317051654|ref|YP_004112770.1| hypothetical protein Selin_1480 [Desulfurispirillum indicum S5]
 gi|316946738|gb|ADU66214.1| hypothetical protein Selin_1480 [Desulfurispirillum indicum S5]
          Length = 1041

 Score = 34.8 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 2/72 (2%)

Query: 26  AITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFISVLMLFDTAEIKV 85
           A+   + A   VL+ +L     +     G+ +Y W  IF   I   I+  +  D A    
Sbjct: 342 AMFAIVGAMSCVLM-LLWPTPVFGKAFAGI-IYLWGFIFFWAIGDAIAHKIAVDRAFDLY 399

Query: 86  AKSPVREIAIYL 97
           A+       I +
Sbjct: 400 AELRATGGTIGI 411


>gi|297726469|ref|NP_001175598.1| Os08g0441200 [Oryza sativa Japonica Group]
 gi|42408696|dbj|BAD09915.1| unknown protein [Oryza sativa Japonica Group]
 gi|42408698|dbj|BAD09917.1| unknown protein [Oryza sativa Japonica Group]
 gi|255678479|dbj|BAH94326.1| Os08g0441200 [Oryza sativa Japonica Group]
          Length = 64

 Score = 34.4 bits (78), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 5/62 (8%)

Query: 6  FLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILP-----GDLGYSIPVFGMHLYTW 60
           L     G K R      L       ++  + +  +       G  G+    FGM  YTW
Sbjct: 2  LLLLQRGGDKARQRGTSSLSCTAGLGVSPIRAMSSLTEDKEEEGGDGFGDSYFGMSYYTW 61

Query: 61 SL 62
          +L
Sbjct: 62 AL 63


>gi|300811771|ref|ZP_07092244.1| MMPL family protein [Lactobacillus delbrueckii subsp. bulgaricus
            PB2003/044-T3-4]
 gi|300497270|gb|EFK32319.1| MMPL family protein [Lactobacillus delbrueckii subsp. bulgaricus
            PB2003/044-T3-4]
          Length = 1407

 Score = 34.4 bits (78), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 50/110 (45%), Gaps = 7/110 (6%)

Query: 1    MIGIGFLFNL--ISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLY 58
            +IG+G    L   S ++  +    ILG +    I++  +   ++ G +G S   + +  +
Sbjct: 1235 LIGVGIALILVTRSLLQPIY----ILGTLLLAYISSLSITRWVVSGVMGRSTLAWNVPFF 1290

Query: 59   TWSLIFSLVIILFISVLMLF-DTAEIKVAKSPVREIAIYLFVFLIFANFI 107
            T+ ++ +L +   I V+M + D+    +  + + +    +   +I A  I
Sbjct: 1291 TFIMLIALGVDYSIFVMMRYRDSDPHALPSARILKACTAIGTVVISAVVI 1340


>gi|305664931|ref|YP_003861218.1| beta-hexosaminidase [Maribacter sp. HTCC2170]
 gi|88707761|gb|EAR00001.1| beta-hexosaminidase precursor [Maribacter sp. HTCC2170]
          Length = 687

 Score = 34.4 bits (78), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 8/106 (7%)

Query: 1   MIGIGFLFNLISGIKQRHYS--IMILGAITTCIIATRQVLIHILPG-DLGYSIPVFGMHL 57
           ++ IGF+  L+   K    +  I+++  +   I +   +    L G D  Y   +   H 
Sbjct: 22  ILAIGFILELLYKKKPSETAKDIVLVVLLIGFISSLVSLGSGWLLGEDGSYDETLLFRH- 80

Query: 58  YTWSLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIF 103
             W  +   V   F  +L +   +   +A      + I   + L  
Sbjct: 81  -RWLAVAFTV---FTGLLYVLKKSTNHLAGKTYFPVFIITLILLSI 122


>gi|146300292|ref|YP_001194883.1| cytochrome c oxidase, cbb3-type, subunit I [Flavobacterium
           johnsoniae UW101]
 gi|146154710|gb|ABQ05564.1| cytochrome c oxidase, cbb3-type, subunit I [Flavobacterium
           johnsoniae UW101]
          Length = 727

 Score = 34.0 bits (77), Expect = 6.1,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 4/103 (3%)

Query: 10  LISG-IKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVI 68
           L  G ++  H + +I   +     A     +  L     +S  +  +H + W LI    +
Sbjct: 50  LSYGRLRPLHTNAVIFAFVGNAFFAGMYYSMQRLLKARMFSDFLSNLHFWGWQLII---V 106

Query: 69  ILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111
              I++ + + +++         +IAI L   ++  N I T+L
Sbjct: 107 AAAITLPLGYTSSKEYAELEWPIDIAIALIWVVMGINMIGTML 149


>gi|146298959|ref|YP_001193550.1| hypothetical protein Fjoh_1199 [Flavobacterium johnsoniae UW101]
 gi|146153377|gb|ABQ04231.1| protein of unknown function DUF418 [Flavobacterium johnsoniae
           UW101]
          Length = 398

 Score = 34.0 bits (77), Expect = 6.6,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 1/73 (1%)

Query: 55  MHLYTWSLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILECG 114
            H Y W  I S +I +   + +L+   ++K   +  R          I  N +   +  G
Sbjct: 270 FHPYFW-FILSTMIFIASGLSLLYSHKKLKTVFNYFRAGGKMTLTNYIAQNILGAFIFSG 328

Query: 115 LTQCFDNPTFYQL 127
           +     +   Y  
Sbjct: 329 IGLGIADTMPYWF 341


>gi|270308523|ref|YP_003330581.1| hypothetical protein DhcVS_1139 [Dehalococcoides sp. VS]
 gi|270154415|gb|ACZ62253.1| hypothetical protein DhcVS_1139 [Dehalococcoides sp. VS]
          Length = 191

 Score = 34.0 bits (77), Expect = 6.8,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 21/54 (38%)

Query: 59  TWSLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTILE 112
           +W+L+   +II+  + L +    E          IA+         N I+T  E
Sbjct: 7   SWALLAFGLIIIAGASLFILFKNEDSRKTDLEDRIALAELAIPNVVNSIATTTE 60


>gi|228474052|ref|ZP_04058793.1| arylsulfatase [Capnocytophaga gingivalis ATCC 33624]
 gi|228274566|gb|EEK13407.1| arylsulfatase [Capnocytophaga gingivalis ATCC 33624]
          Length = 709

 Score = 34.0 bits (77), Expect = 7.3,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 43/111 (38%), Gaps = 12/111 (10%)

Query: 1   MIGIGFLFNLISGIKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTW 60
           +I   F+ N+     Q+ Y  +ILGA+   +   + V  +I     G    +        
Sbjct: 67  VIYFLFIANVKY---QKPYGYIILGAMLLLLCYIQFVPNNIFYQYGGSVEEI-------- 115

Query: 61  SLIFSLVIILFISVLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111
           +L F     L  + ++ F     +  +  +  I ++++ F I  N +S   
Sbjct: 116 ALFFFGAKTLCFAAML-FAGKWRRQVRQVLYFITLFIYTFAIVMNAVSEYF 165


>gi|303258370|ref|ZP_07344373.1| disulfide bond formation protein, DsbB family [Burkholderiales
          bacterium 1_1_47]
 gi|302858816|gb|EFL81904.1| disulfide bond formation protein, DsbB family [Burkholderiales
          bacterium 1_1_47]
          Length = 50

 Score = 34.0 bits (77), Expect = 7.7,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 52 VFGMHLYTWSLIFSLVIILFISVLMLFDT 80
          V G+H Y W+ +    +I+ + V+  F  
Sbjct: 2  VLGVHTYFWAEVVFWALIILLGVMFFFAP 30


>gi|257060615|ref|YP_003138503.1| pentapeptide repeat protein [Cyanothece sp. PCC 8802]
 gi|256590781|gb|ACV01668.1| pentapeptide repeat protein [Cyanothece sp. PCC 8802]
          Length = 652

 Score = 33.6 bits (76), Expect = 8.5,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 12/95 (12%)

Query: 14  IKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFIS 73
            +     I +L A+    I+  +  +     D  +   V  +++Y  S+   L + LF +
Sbjct: 92  PRP----IALLIAV--SFISLVRAGL-----DHHFGAFVVALNIYF-SIALILAVALFGA 139

Query: 74  VLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFIS 108
                D  +  +  + +   A    + +I  N IS
Sbjct: 140 TAAAVDEPKSSIGSTALATFACMALLIVIVVNVIS 174


>gi|332662009|ref|YP_004444797.1| cytochrome c oxidase, cbb3-type, subunit I [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332330823|gb|AEE47924.1| cytochrome c oxidase, cbb3-type, subunit I [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 710

 Score = 33.6 bits (76), Expect = 9.6,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 14  IKQRHYSIMILGAITTCIIATRQVLIHILPGDLGYSIPVFGMHLYTWSLIFSLVIILFIS 73
           I+  H +  I   +   I       +  L     +S  +  +H + W LI    ++  ++
Sbjct: 56  IRPLHTNAAIFAFVGNGIFMGVYYSLQRLLKTRMFSNTLSNIHFWGWQLII---VLAAVT 112

Query: 74  VLMLFDTAEIKVAKSPVREIAIYLFVFLIFANFISTIL 111
           + +   +++         +IAI L   +   N   TI+
Sbjct: 113 LPLGITSSKEYAELEWPIDIAIALVWVVFGINMFGTII 150


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.319    0.161    0.517 

Lambda     K      H
   0.267   0.0494    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,602,215,041
Number of Sequences: 14124377
Number of extensions: 67550218
Number of successful extensions: 547645
Number of sequences better than 10.0: 1212
Number of HSP's better than 10.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 930
Number of HSP's that attempted gapping in prelim test: 546623
Number of HSP's gapped (non-prelim): 1437
length of query: 129
length of database: 4,842,793,630
effective HSP length: 95
effective length of query: 34
effective length of database: 3,500,977,815
effective search space: 119033245710
effective search space used: 119033245710
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (20.6 bits)
S2: 76 (33.6 bits)