HHsearch alignment for GI: 254780341 and conserved domain: COG0600
>COG0600 TauC ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].
Probab=100.00 E-value=1.4e-45 Score=293.10 Aligned_cols=192 Identities=30% Similarity=0.440 Sum_probs=186.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 84499999999999999788766677642101211232023503454420120210110000002101788999999887
Q gi|254780341|r 88 GYWQETTETLSLVLVSTFISMFIGVPLGVLAAWYPRFYSIIRLFLDSMQTIPTFVYLIPALVLFGLGMVPGIVATIVFSI 167 (281)
Q Consensus 88 g~W~~~~~Tl~~~~~~~~ia~~igiplGi~~~~~~~~~~~~~p~l~~~~~iP~~v~l~p~i~~fG~g~~~~i~a~~i~~~ 167 (281)
T Consensus 58 ~L~~~~~~Sl~rv~~Gf~la~~~gi~lgil~g~~~~~~~~l~P~i~~l~~iP~lA~~Pl~ilwfG~g~~s~i~i~~~~~f 137 (258)
T COG0600 58 ELFQHLLASLLRVLLGFALAAVLGIPLGILMGLSRLLERLLDPLVQVLRPIPPLALAPLAILWFGIGETSKIVIAVLGAF 137 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 59999999999999999999999999999998579999999699999931777999999999990796119999999999
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHH
Q ss_conf 899999588741299899999996078820101223688626799999999999999999999997058-8049999999
Q gi|254780341|r 168 PTSVRLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLSMVVVTALVGSN-GLGVPVLRAL 246 (281)
Q Consensus 168 ~pi~~~t~~gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l~~vvia~~ig~~-GLG~~i~~a~ 246 (281)
T Consensus 138 fpi~int~~Gvr~v~~~~~~~ar~lgas~~~~l~~v~lP~AlP~i~tgLRia~g~aw~~~VvaE~l~a~~GLG~~i~~a~ 217 (258)
T COG0600 138 FPILINTLDGVRSVDPDLLELARTLGASRWQILRKVILPAALPYIFTGLRIAIGLAWIGLVVAELLGASSGLGYLILDAR 217 (258)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 99999999998718999999999809897778776205300789999999999999999999999705666879999999
Q ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 740789899999999999999999999874210
Q gi|254780341|r 247 NTVDIGRGFESGLCIVILAIILDRLFSIPDPRD 279 (281)
Q Consensus 247 ~~~~~~~~~~~~l~Iv~lai~lDri~~~~~~r~ 279 (281)
T Consensus 218 ~~~~~~~v~a~i~~i~~lgll~d~~v~~~er~~ 250 (258)
T COG0600 218 NNLQTDLVFAAILVIALLGLLLDRLVRLLERRL 250 (258)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 851678999999999999999999999999998