HHsearch alignment for GI: 254780341 and conserved domain: COG1173
>COG1173 DppC ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].
Probab=99.74 E-value=4.5e-16 Score=115.25 Aligned_cols=188 Identities=24% Similarity=0.329 Sum_probs=148.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999978876667764210121-12320235034544201202101100000021017889999998878999
Q gi|254780341|r 93 TTETLSLVLVSTFISMFIGVPLGVLAAWY-PRFYSIIRLFLDSMQTIPTFVYLIPALVLFGLGMVPGIVATIVFSIPTSV 171 (281)
Q Consensus 93 ~~~Tl~~~~~~~~ia~~igiplGi~~~~~-~~~~~~~~p~l~~~~~iP~~v~l~p~i~~fG~g~~~~i~a~~i~~~~pi~ 171 (281)
T Consensus 85 ~r~SL~I~~~~~~~~~~iG~~lG~iaGy~gG~vD~ilmri~di~ls~P~lll~i~l~~~lg~~~~~iiial~i~~W~~~A 164 (289)
T COG1173 85 ARISLLIGLLAVLISLVIGTLLGLLAGYFGGWVDRVLMRITDIFLAFPSLLLAILLVAILGPGLLNLILALALVGWPGYA 164 (289)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999880761999999999999976599999999999772489899999999439999
Q ss_pred HHHHHHHHCC-CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCHHHHHHH
Q ss_conf 9958874129-98999999960788201012236886267999999999999999999999970------5880499999
Q gi|254780341|r 172 RLTRLGIIST-PPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLSMVVVTALVG------SNGLGVPVLR 244 (281)
Q Consensus 172 ~~t~~gl~~v-~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l~~vvia~~ig------~~GLG~~i~~ 244 (281)
T Consensus 165 R~vR~~vl~~k~~eyV~AAr~~G~~~~~Ii~rhIlPn~~~~iiv~~~l~~~~aIl~ea~LSFLGLG~~pp~pswG~ml~~ 244 (289)
T COG1173 165 RIVRGQVLSLREREYVEAARALGASTLRIIFRHILPNVLPPLIVLATLDIGGAILAEAGLSFLGLGVQPPTPSWGTMLAE 244 (289)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 99999999987768999999849992012498862302899999999999999999999999068899899989999999
Q ss_pred HHH---HHCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHCC
Q ss_conf 997---4078989999999999999----99999998742105
Q gi|254780341|r 245 ALN---TVDIGRGFESGLCIVILAI----ILDRLFSIPDPRDR 280 (281)
Q Consensus 245 a~~---~~~~~~~~~~~l~Iv~lai----~lDri~~~~~~r~~ 280 (281)
T Consensus 245 ~~~~~~~~~~w~~l~Pgl~i~l~vl~fnllgdgLrd~~dpr~~ 287 (289)
T COG1173 245 GRNYLLTGAWWLVLFPGLAILLTVLAFNLLGDGLRDALDPRLR 287 (289)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHC
T ss_conf 9998870485999998999999999999999889987480102