HHsearch alignment for GI: 254780341 and conserved domain: COG4132
>COG4132 ABC-type uncharacterized transport system, permease component [General function prediction only].
Probab=98.54 E-value=6.5e-05 Score=48.06 Aligned_cols=189 Identities=20% Similarity=0.294 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CHHHHHCCCHHHH---HHHHCCC-CCHHHH----------HHHHCCC
Q ss_conf 999999999999997887666776421012---1123202350345---4420120-210110----------0000021
Q gi|254780341|r 91 QETTETLSLVLVSTFISMFIGVPLGVLAAW---YPRFYSIIRLFLD---SMQTIPT-FVYLIP----------ALVLFGL 153 (281)
Q Consensus 91 ~~~~~Tl~~~~~~~~ia~~igiplGi~~~~---~~~~~~~~~p~l~---~~~~iP~-~v~l~p----------~i~~fG~ 153 (281)
T Consensus 56 ~a~~~Sikis~aSsl~G~lig~~~a~alv~~~~ps~ir~~lltfsgvaSnFaGVPLAfAFiatLG~~G~vtv~Lk~~~g~ 135 (282)
T COG4132 56 QAYWISIKISFASSLLGLLIGFLLAWALVLGGLPSWIRSFLLTFSGVASNFAGVPLAFAFIATLGRNGLVTVFLKTLGGF 135 (282)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHCCC
T ss_conf 99999986799998899999999999999779478888778423145541368719999999965441699999984274
Q ss_pred C-------HHH---HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0-------178---899999988789999958874129989999999607882010122368862679999999999999
Q gi|254780341|r 154 G-------MVP---GIVATIVFSIPTSVRLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLS 223 (281)
Q Consensus 154 g-------~~~---~i~a~~i~~~~pi~~~t~~gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~ 223 (281)
T Consensus 136 ~~~~~~fnl~s~~GltitY~yFQIPL~vlil~PA~dgLk~ewreaa~~LGa~~~qYWrmva~PiL~PsllGt~vlLfANA 215 (282)
T COG4132 136 NLYSTGFNLLSFFGLTITYVYFQIPLMVLILTPAFDGLKKEWREAAAILGATGWQYWRMVALPILWPSLLGTFVLLFANA 215 (282)
T ss_pred CEECCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 30046504888625257757886568999897666667899999999867742899999989985199988899999987
Q ss_pred HH-HHHHHHHHCCC-CHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99-99999997058-80499999997407----89899999999999999999999874210
Q gi|254780341|r 224 LS-MVVVTALVGSN-GLGVPVLRALNTVD----IGRGFESGLCIVILAIILDRLFSIPDPRD 279 (281)
Q Consensus 224 l~-~vvia~~ig~~-GLG~~i~~a~~~~~----~~~~~~~~l~Iv~lai~lDri~~~~~~r~ 279 (281)
T Consensus 216 fGA~ATayaLtgsslNivPI~l~AqIrGDVl~np~lg~ALa~~mi~it~v~n~~~~wlr~rs 277 (282)
T COG4132 216 FGAYATAYALTGSSLNIVPILLYAQIRGDVLHNPNLGYALAFGMIVITGVANLLYIWLRKRS 277 (282)
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 75778787750687541689999998214568951899999999999999999999999877