HHsearch alignment for GI: 254780341 and conserved domain: PRK09433

>PRK09433 thiP thiamine transporter membrane protein; Reviewed.
Probab=99.80  E-value=3.6e-17  Score=121.82  Aligned_cols=181  Identities=16%  Similarity=0.223  Sum_probs=72.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCC-CC---HHH-
Q ss_conf             844999999999999997887666776421012-----11232023503454420120210110000002-10---178-
Q gi|254780341|r   88 GYWQETTETLSLVLVSTFISMFIGVPLGVLAAW-----YPRFYSIIRLFLDSMQTIPTFVYLIPALVLFG-LG---MVP-  157 (281)
Q Consensus        88 g~W~~~~~Tl~~~~~~~~ia~~igiplGi~~~~-----~~~~~~~~~p~l~~~~~iP~~v~l~p~i~~fG-~g---~~~-  157 (281)
T Consensus       326 ~~~~a~~nSl~iA~~aa~la~~lal~la~~~~~~~~r~~~~~~~~l~~~~~lplaiPgiVlg~Gl~ll~~~~~~~~~~~~  405 (536)
T PRK09433        326 ALWQALWTSLRIALLAALLAVLLAMALLLSSRELRLRQKALAAQALELSGMLILAMPGLVLATGLFLLLRNFTDLPQSAL  405 (536)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHH
T ss_conf             89999999999999999999999999999999999850106889999999988733299999999999862024568899


Q ss_pred             --HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             --899999988789999958874129989999999607882010122368862679999999999999999999999705
Q gi|254780341|r  158 --GIVATIVFSIPTSVRLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLSMVVVTALVGS  235 (281)
Q Consensus       158 --~i~a~~i~~~~pi~~~t~~gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l~~vvia~~ig~  235 (281)
T Consensus       406 ~ivil~~~l~~lP~a~r~l~~~l~~i~~~le~aA~sLGas~~~~f~~I~lPll~p~i~~a~~l~F~~smgEl~a~~ll~~  485 (536)
T PRK09433        406 GIVILVNALMALPYALRVLEPPMRDIAARYGRLCQSLGIRGWSRLRLVEWRALRRPLAQAFAFACALSLGDFGVIALFGS  485 (536)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECC
T ss_conf             99999999999999999999999970175999998869998789698539830999999999999999875370213339


Q ss_pred             C---CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Q ss_conf             8---80499999997407898999999999999999
Q gi|254780341|r  236 N---GLGVPVLRALNTVDIGRGFESGLCIVILAIIL  268 (281)
Q Consensus       236 ~---GLG~~i~~a~~~~~~~~~~~~~l~Iv~lai~l  268 (281)
T Consensus       486 ~~~~TLp~~iy~~~~~~~~~~Aa~~allL~ll~~~~  521 (536)
T PRK09433        486 QDFRTLPYLLYQQLGSYRSQDAAVTALLLLLLCLLL  521 (536)
T ss_pred             CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf             998618999999872767688999999999999999