HHsearch alignment for GI: 254780341 and conserved domain: PRK09433
>PRK09433 thiP thiamine transporter membrane protein; Reviewed.
Probab=99.80 E-value=3.6e-17 Score=121.82 Aligned_cols=181 Identities=16% Similarity=0.223 Sum_probs=72.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCC-CC---HHH-
Q ss_conf 844999999999999997887666776421012-----11232023503454420120210110000002-10---178-
Q gi|254780341|r 88 GYWQETTETLSLVLVSTFISMFIGVPLGVLAAW-----YPRFYSIIRLFLDSMQTIPTFVYLIPALVLFG-LG---MVP- 157 (281)
Q Consensus 88 g~W~~~~~Tl~~~~~~~~ia~~igiplGi~~~~-----~~~~~~~~~p~l~~~~~iP~~v~l~p~i~~fG-~g---~~~- 157 (281)
T Consensus 326 ~~~~a~~nSl~iA~~aa~la~~lal~la~~~~~~~~r~~~~~~~~l~~~~~lplaiPgiVlg~Gl~ll~~~~~~~~~~~~ 405 (536)
T PRK09433 326 ALWQALWTSLRIALLAALLAVLLAMALLLSSRELRLRQKALAAQALELSGMLILAMPGLVLATGLFLLLRNFTDLPQSAL 405 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHH
T ss_conf 89999999999999999999999999999999999850106889999999988733299999999999862024568899
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf --899999988789999958874129989999999607882010122368862679999999999999999999999705
Q gi|254780341|r 158 --GIVATIVFSIPTSVRLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLSMVVVTALVGS 235 (281)
Q Consensus 158 --~i~a~~i~~~~pi~~~t~~gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l~~vvia~~ig~ 235 (281)
T Consensus 406 ~ivil~~~l~~lP~a~r~l~~~l~~i~~~le~aA~sLGas~~~~f~~I~lPll~p~i~~a~~l~F~~smgEl~a~~ll~~ 485 (536)
T PRK09433 406 GIVILVNALMALPYALRVLEPPMRDIAARYGRLCQSLGIRGWSRLRLVEWRALRRPLAQAFAFACALSLGDFGVIALFGS 485 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECC
T ss_conf 99999999999999999999999970175999998869998789698539830999999999999999875370213339
Q ss_pred C---CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Q ss_conf 8---80499999997407898999999999999999
Q gi|254780341|r 236 N---GLGVPVLRALNTVDIGRGFESGLCIVILAIIL 268 (281)
Q Consensus 236 ~---GLG~~i~~a~~~~~~~~~~~~~l~Iv~lai~l 268 (281)
T Consensus 486 ~~~~TLp~~iy~~~~~~~~~~Aa~~allL~ll~~~~ 521 (536)
T PRK09433 486 QDFRTLPYLLYQQLGSYRSQDAAVTALLLLLLCLLL 521 (536)
T ss_pred CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 998618999999872767688999999999999999