HHsearch alignment for GI: 254780341 and conserved domain: PRK10952
>PRK10952 glycine betaine transporter membrane protein; Provisional.
Probab=100.00 E-value=0 Score=515.62 Aligned_cols=279 Identities=39% Similarity=0.622 Sum_probs=276.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 98200066777999999999999645999999999999999999999720776899999999999984113302888877
Q gi|254780341|r 1 MSPIIQAPIPLGDYLQEFFVCLTQNGEWFCNILSFILLKAVNLVLFVLQYLPPLVFVCVVSLLVLMVKRSITIAVGTAMG 80 (281)
Q Consensus 1 ~~~~~~~~ip~~~~i~~~~~wl~~~~~~~~~~i~~~l~~~l~~~~~~l~~~p~~~~i~~v~~l~~~~~~~~~~~~~~~~~ 80 (281)
T Consensus 54 ~~~~~~~~iPl~~Wv~~~vdWl~~~f~p~F~~I~~~i~~~l~~~~~~L~~~P~~~~i~~~~~law~~~-g~~la~~t~~~ 132 (354)
T PRK10952 54 LDPFHKTLIPLDSWVTEGIDWVVTHFRPVFQGIRVPVDYILNGFQQLLLGMPAPVAIIVFALIAWQIS-GVGMGVATLIS 132 (354)
T ss_pred CCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC-CHHHHHHHHHH
T ss_conf 26564277167999999999999985999999999999999999999802988999999999999980-47999999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHH
Q ss_conf 54221348449999999999999978876667764210121123202350345442012021011000000210178899
Q gi|254780341|r 81 LLLIIKQGYWQETTETLSLVLVSTFISMFIGVPLGVLAAWYPRFYSIIRLFLDSMQTIPTFVYLIPALVLFGLGMVPGIV 160 (281)
Q Consensus 81 ~~~i~~~g~W~~~~~Tl~~~~~~~~ia~~igiplGi~~~~~~~~~~~~~p~l~~~~~iP~~v~l~p~i~~fG~g~~~~i~ 160 (281)
T Consensus 133 l~~I~~~G~W~~aM~TLalvlvav~~~~iiGiplGI~~ars~r~~~il~PiLD~mQT~P~FVYLiP~vmlFGiG~vpavi 212 (354)
T PRK10952 133 LIAIGAIGAWSQAMVTLALVLTALLFCIVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVV 212 (354)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 99999966329999999999999999999999999999746999999999998731130799999999992797145999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 99998878999995887412998999999960788201012236886267999999999999999999999970588049
Q gi|254780341|r 161 ATIVFSIPTSVRLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLSMVVVTALVGSNGLGV 240 (281)
Q Consensus 161 a~~i~~~~pi~~~t~~gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l~~vvia~~ig~~GLG~ 240 (281)
T Consensus 213 AtviyAlpP~iR~T~lGir~Vp~~viEAa~~~G~T~~Q~L~kVeLPlA~P~ImaGvNQtimlaLsMvVIAa~IGagGLG~ 292 (354)
T PRK10952 213 VTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQ 292 (354)
T ss_pred HHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 99999735899999999960888899999984999888989833602499999999999999999999999957886618
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999997407898999999999999999999998742105
Q gi|254780341|r 241 PVLRALNTVDIGRGFESGLCIVILAIILDRLFSIPDPRDR 280 (281)
Q Consensus 241 ~i~~a~~~~~~~~~~~~~l~Iv~lai~lDri~~~~~~r~~ 280 (281)
T Consensus 293 ~Vl~gi~~~d~G~gl~aGl~IVlLAIiLDRiTqa~g~~~r 332 (354)
T PRK10952 293 MVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSR 332 (354)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 9999986224368999999999999999998898562000