HHsearch alignment for GI: 254780341 and conserved domain: PRK11365

>PRK11365 ssuC alkanesulfonate transporter permease subunit; Provisional.
Probab=100.00  E-value=1.4e-45  Score=292.75  Aligned_cols=196  Identities=17%  Similarity=0.200  Sum_probs=189.9

Q ss_pred             HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHH
Q ss_conf             21348449999999999999978876667764210121123202350345442012021011000000210178899999
Q gi|254780341|r   84 IIKQGYWQETTETLSLVLVSTFISMFIGVPLGVLAAWYPRFYSIIRLFLDSMQTIPTFVYLIPALVLFGLGMVPGIVATI  163 (281)
Q Consensus        84 i~~~g~W~~~~~Tl~~~~~~~~ia~~igiplGi~~~~~~~~~~~~~p~l~~~~~iP~~v~l~p~i~~fG~g~~~~i~a~~  163 (281)
T Consensus        53 ~~~g~l~~~~~~Tl~r~~~Gf~l~~~~Gi~lGil~g~~~~~~~~~~P~~~~l~~iP~ia~~Pl~ilwfG~g~~~~i~~i~  132 (263)
T PRK11365         53 SASGELWQHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGIDESAKIFLVA  132 (263)
T ss_pred             HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf             54845999999999999999999999999999999986999987585999997657999999999997157420447886


Q ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHH
Q ss_conf             9887899999588741299899999996078820101223688626799999999999999999999997058-804999
Q gi|254780341|r  164 VFSIPTSVRLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLSMVVVTALVGSN-GLGVPV  242 (281)
Q Consensus       164 i~~~~pi~~~t~~gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l~~vvia~~ig~~-GLG~~i  242 (281)
T Consensus       133 ~~~~~pi~~nt~~Gv~~v~~~~~~~ar~~g~s~~~~l~~V~lP~alP~i~~glria~~~a~~~~v~aE~i~~~~GLG~~i  212 (263)
T PRK11365        133 LGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANSGIGYLA  212 (263)
T ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf             51042889999888754999999999872999999999989800688999999999999999999999984469888999


Q ss_pred             HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             9999740789899999999999999999999874210
Q gi|254780341|r  243 LRALNTVDIGRGFESGLCIVILAIILDRLFSIPDPRD  279 (281)
Q Consensus       243 ~~a~~~~~~~~~~~~~l~Iv~lai~lDri~~~~~~r~  279 (281)
T Consensus       213 ~~a~~~~~~~~v~a~ii~i~llg~~l~~~~~~lerrl  249 (263)
T PRK11365        213 MNAREFLQTDVVVVAIILYALLGKLADVSAQLLERLW  249 (263)
T ss_pred             HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999870688999999999999999999999999993