HHsearch alignment for GI: 254780342 and conserved domain: COG2113
>COG2113 ProX ABC-type proline/glycine betaine transport systems, periplasmic components [Amino acid transport and metabolism].
Probab=100.00 E-value=0 Score=394.71 Aligned_cols=275 Identities=34% Similarity=0.573 Sum_probs=261.2
Q ss_pred CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCC
Q ss_conf 58345883799425886999999999999961069848998564057888851498139998404641356666553047
Q gi|254780342|r 20 RDADSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGS 99 (309)
Q Consensus 20 ~~~~~~~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~~~~~ 99 (309)
T Consensus 25 ~~~~~~~tV~~a~~~W~s~~~~t~v~~~iLk-~~Gy~v~~~~~~~~~~~~sla~gd~D~~~~~W~p~~~~~~~~~~~~~~ 103 (302)
T COG2113 25 AAAEAGKTVRIADVGWTSGTATTNVAKKILK-GLGYTVELVTLDTAVMYQSLAKGDLDVFPEAWLPTTPDDYKKAVKDKK 103 (302)
T ss_pred CCCCCCCEEEEEECCCCHHHHHHHHHHHHHH-HCCCCCEEEECCHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHCCCC
T ss_conf 1345588258843696178999999999999-679962466555999999997379753201026887588998742685
Q ss_pred EEEECCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCH
Q ss_conf 02301356685356786344641234553565555665442013578543200555876640354522100103665201
Q gi|254780342|r 100 IKLVAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELAS 179 (309)
Q Consensus 100 ~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~ 179 (309)
T Consensus 104 v~~~~~~~~Ga~~g~~vp~y~~d~~iksi~D~~~~~d~~~g~i~g~~pG~g~~~~~~~~~k~y~~~~~~~~lv~~s~~am 183 (302)
T COG2113 104 VELGGTNLEGAKQGWAVPKYVADAGIKSIADLAKFKDKFGGKIYGIEPGWGCMRVIEDAIKAYGLGLKGFELVESSEAAM 183 (302)
T ss_pred EEECCCCCCCCEEEEEECEEHHHCCCCCHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHH
T ss_conf 44135466772478982400342355656569866687778578158997354899999864365536448844747889
Q ss_pred HHHHHHHHHCCCCEEEEEECCCHHHHCCCCEEECCC---CCCCCCCHHHHHHHHCHHHHHHCHHHHHHHHHCCCCHHHHH
Q ss_conf 899999996599369994124223201585140078---65467786583544277778748899999874089989999
Q gi|254780342|r 180 FSQIRRDQRNNIPAVFLSWEPHPINSDLNIHYLPGG---EEISGFGEASVYTVVRSDYLDKCPNISRLLKNIKFSVALEN 256 (309)
Q Consensus 180 ~a~l~~A~~~~~~~v~~~wsp~~~~~~~dl~~Ledp---~~~~~~p~~~~~~vv~~~~~~~~P~~~~~L~~~~ls~~~~~ 256 (309)
T Consensus 184 l~~~~~a~~~~~piv~~~WsPh~m~~k~~l~~L~~~~~~~~~~~-g~~~v~t~~~kg~~~~~p~v~~~l~~~~~~~~~~n 262 (302)
T COG2113 184 LAAAIRAAKRKEPIVFYGWSPHWMFGKYDLKYLEDPGPPKGANG-GWETVHTVVRKGFAEEAPNVAKLLANFSFPLAEEN 262 (302)
T ss_pred HHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECCCCCCCCCCC-CCEEEEHHHHHHHHHHCCHHHHHHHHCCCCHHHHH
T ss_conf 99999997458987999827626652365466047886567788-61046315624666759069999997678888999
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 9999998459998999999999859999987547545677
Q gi|254780342|r 257 EMMKLILNNKQDRQFVGRTMLRTHPDLLKNWLIGVTTFDG 296 (309)
Q Consensus 257 ~l~~~v~~~g~~~~~vA~~wL~~n~~~~~~Wl~~~~~~~~ 296 (309)
T Consensus 263 ~~~~~~~~~~~~~e~aA~~wl~~~~~~~~~Wv~~~~~~~~ 302 (302)
T COG2113 263 ALMAAMDDGGATPEEAAKQWLKANPEIWDGWVSGVAAADG 302 (302)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHCHHHHCCC
T ss_conf 9989998389988999999999787988755263543149