HHsearch alignment for GI: 254780342 and conserved domain: PRK11622

>PRK11622 putative ABC transporter solute-binding protein; Provisional.
Probab=90.90  E-value=1.3  Score=23.79  Aligned_cols=250  Identities=13%  Similarity=0.144  Sum_probs=109.5

Q ss_pred             CHHHHHHHHHHHHHHHHHCCCC-----------CCCCCEEEECCCCCH-----HHHHHHHHHHHHHHCCCCEEEEEEC-C
Q ss_conf             9579999999999986303583-----------458837994258869-----9999999999996106984899856-4
Q gi|254780342|r    1 MYKILAVCLFLTTFSISYARDA-----------DSCTPVRFADTGWTD-----IAATTAMTSVILEEILGYKTNIKLL-A   63 (309)
Q Consensus         1 mkk~~~~~~~~~~~~~~~~~~~-----------~~~~~I~ig~~~wte-----~~v~a~i~~~iLE~~lGy~Ve~~~~-~   63 (309)
T Consensus         2 ~r~~~~~~~~l~~~~~~~~~~~~~~~W~~i~~~A~GqtV~f~--aWGGs~~iN~yi-~w~~~~l~~-~y~ItL~~Vk~~D   77 (401)
T PRK11622          2 MRHLLALLGLLALLSLAAAASDAANTWQQILEEAKGQTVYFN--AWGGSPAINRYL-DWVAKELKE-RYGITLKHVKLAD   77 (401)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEE--EECCCHHHHHHH-HHHHHHHHH-HHCCEEEEECCCC
T ss_conf             588999999999875014576444899999997169889999--767957775999-999999999-8596689952545


Q ss_pred             HHHHHHHH---------HCCCCEEEEEE-------------ECCCCHHHH-HHHHHCC-C-EEEECCCCCC-------CE
Q ss_conf             05788885---------14981399984-------------046413566-6655304-7-0230135668-------53
Q gi|254780342|r   64 VPVTFRSL---------KNKGIDIFMGY-------------WYPSLEKFI-APYLEEG-S-IKLVAENLQG-------AK  111 (309)
Q Consensus        64 ~~~~~~al---------~~G~iD~~~e~-------------w~p~~~~~~-~~~~~~~-~-~~~~~~~~~~-------~~  111 (309)
T Consensus        78 t~~av~rvlaEk~AG~~~~GsvDliWINGENF~~mK~~~LL~gp~~~~LPN~~~vd~~~~v~~DFg~PtdG~EaPWg~aQ  157 (401)
T PRK11622         78 IAEAVNRLLAEKQAGRDTGGSVDLVWINGENFRTLKEAGLLYGPFAETLPNWRYVDTQLPVREDFGVPTEGLEAPWGVAQ  157 (401)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf             89999999999860778898445899886128988867831387666594042058875535557873665516765531


Q ss_pred             EEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHCCCCCCC-EEE------------------
Q ss_conf             567863446412345535655556654420135-785432005558766403545221-001------------------
Q gi|254780342|r  112 YMLAVNDVGFALGIKSYQDIAKYKKELGAKIYG-IEPGNEGNQRILDMINNNKFSLKG-FRL------------------  171 (309)
Q Consensus       112 ~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~l~~~~-~~~------------------  171 (309)
T Consensus       158 ~vf~ydsa~v~~pP~s~~eLl~wak~nPGrfTYP~PPdF~GstFlkq~L~~l~~~~~~l~~p~~~~~~~~~~~plW~yLd  237 (401)
T PRK11622        158 LVFIYDSARVPQPPQSPAELLEWAKANPGRFTYPRPPDFTGTAFLKQLLIELTGDPAALKQPVDDATFARVTAPLWDYLD  237 (401)
T ss_pred             EEEEECHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf             89998766559999899999999997899714899998753799999999973985675186788999987389999999


Q ss_pred             -------EC-CCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCEEECCCCCCCCCCHHHHHHHHCHHHH-----HHC
Q ss_conf             -------03-66520189999999659936999412422320158514007865467786583544277778-----748
Q gi|254780342|r  172 -------IE-ASELASFSQIRRDQRNNIPAVFLSWEPHPINSDLNIHYLPGGEEISGFGEASVYTVVRSDYL-----DKC  238 (309)
Q Consensus       172 -------~~-~s~~~~~a~l~~A~~~~~~~v~~~wsp~~~~~~~dl~~Ledp~~~~~~p~~~~~~vv~~~~~-----~~~  238 (309)
T Consensus       238 ~l~P~LWr~G~~yP~~~~~l~~L~adGEi~~~~sfnp~~a~~~I~~G~lP~t~r~~~~~~G---tigN~hflAIP~NA~~  314 (401)
T PRK11622        238 ELHPYLWRKGKTFPASPAELDQLLADGELDLAFTFNPNEAQAAIANGELPASTRSFAFSDG---TIGNTHFVAIPFNANA  314 (401)
T ss_pred             HHCHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCEEEEECCCC---CCCCCCCEEEECCCCC
T ss_conf             8577888440126899999999984798778840387778889866999974026742698---2167650772079998


Q ss_pred             HHHHHHHHHCCCCHHHHHH
Q ss_conf             8999998740899899999
Q gi|254780342|r  239 PNISRLLKNIKFSVALENE  257 (309)
Q Consensus       239 P~~~~~L~~~~ls~~~~~~  257 (309)
T Consensus       315 kagA~VvaNfLLSPEAQ~~  333 (401)
T PRK11622        315 KAGAKVVANFLLSPEAQLR  333 (401)
T ss_pred             HHHHHHHHHHHCCHHHHHH
T ss_conf             7789999999639999997