HHsearch alignment for GI: 254780342 and conserved domain: PRK11622
>PRK11622 putative ABC transporter solute-binding protein; Provisional.
Probab=90.90 E-value=1.3 Score=23.79 Aligned_cols=250 Identities=13% Similarity=0.144 Sum_probs=109.5
Q ss_pred CHHHHHHHHHHHHHHHHHCCCC-----------CCCCCEEEECCCCCH-----HHHHHHHHHHHHHHCCCCEEEEEEC-C
Q ss_conf 9579999999999986303583-----------458837994258869-----9999999999996106984899856-4
Q gi|254780342|r 1 MYKILAVCLFLTTFSISYARDA-----------DSCTPVRFADTGWTD-----IAATTAMTSVILEEILGYKTNIKLL-A 63 (309)
Q Consensus 1 mkk~~~~~~~~~~~~~~~~~~~-----------~~~~~I~ig~~~wte-----~~v~a~i~~~iLE~~lGy~Ve~~~~-~ 63 (309)
T Consensus 2 ~r~~~~~~~~l~~~~~~~~~~~~~~~W~~i~~~A~GqtV~f~--aWGGs~~iN~yi-~w~~~~l~~-~y~ItL~~Vk~~D 77 (401)
T PRK11622 2 MRHLLALLGLLALLSLAAAASDAANTWQQILEEAKGQTVYFN--AWGGSPAINRYL-DWVAKELKE-RYGITLKHVKLAD 77 (401)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEE--EECCCHHHHHHH-HHHHHHHHH-HHCCEEEEECCCC
T ss_conf 588999999999875014576444899999997169889999--767957775999-999999999-8596689952545
Q ss_pred HHHHHHHH---------HCCCCEEEEEE-------------ECCCCHHHH-HHHHHCC-C-EEEECCCCCC-------CE
Q ss_conf 05788885---------14981399984-------------046413566-6655304-7-0230135668-------53
Q gi|254780342|r 64 VPVTFRSL---------KNKGIDIFMGY-------------WYPSLEKFI-APYLEEG-S-IKLVAENLQG-------AK 111 (309)
Q Consensus 64 ~~~~~~al---------~~G~iD~~~e~-------------w~p~~~~~~-~~~~~~~-~-~~~~~~~~~~-------~~ 111 (309)
T Consensus 78 t~~av~rvlaEk~AG~~~~GsvDliWINGENF~~mK~~~LL~gp~~~~LPN~~~vd~~~~v~~DFg~PtdG~EaPWg~aQ 157 (401)
T PRK11622 78 IAEAVNRLLAEKQAGRDTGGSVDLVWINGENFRTLKEAGLLYGPFAETLPNWRYVDTQLPVREDFGVPTEGLEAPWGVAQ 157 (401)
T ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 89999999999860778898445899886128988867831387666594042058875535557873665516765531
Q ss_pred EEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHCCCCCCC-EEE------------------
Q ss_conf 567863446412345535655556654420135-785432005558766403545221-001------------------
Q gi|254780342|r 112 YMLAVNDVGFALGIKSYQDIAKYKKELGAKIYG-IEPGNEGNQRILDMINNNKFSLKG-FRL------------------ 171 (309)
Q Consensus 112 ~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~l~~~~-~~~------------------ 171 (309)
T Consensus 158 ~vf~ydsa~v~~pP~s~~eLl~wak~nPGrfTYP~PPdF~GstFlkq~L~~l~~~~~~l~~p~~~~~~~~~~~plW~yLd 237 (401)
T PRK11622 158 LVFIYDSARVPQPPQSPAELLEWAKANPGRFTYPRPPDFTGTAFLKQLLIELTGDPAALKQPVDDATFARVTAPLWDYLD 237 (401)
T ss_pred EEEEECHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 89998766559999899999999997899714899998753799999999973985675186788999987389999999
Q ss_pred -------EC-CCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCEEECCCCCCCCCCHHHHHHHHCHHHH-----HHC
Q ss_conf -------03-66520189999999659936999412422320158514007865467786583544277778-----748
Q gi|254780342|r 172 -------IE-ASELASFSQIRRDQRNNIPAVFLSWEPHPINSDLNIHYLPGGEEISGFGEASVYTVVRSDYL-----DKC 238 (309)
Q Consensus 172 -------~~-~s~~~~~a~l~~A~~~~~~~v~~~wsp~~~~~~~dl~~Ledp~~~~~~p~~~~~~vv~~~~~-----~~~ 238 (309)
T Consensus 238 ~l~P~LWr~G~~yP~~~~~l~~L~adGEi~~~~sfnp~~a~~~I~~G~lP~t~r~~~~~~G---tigN~hflAIP~NA~~ 314 (401)
T PRK11622 238 ELHPYLWRKGKTFPASPAELDQLLADGELDLAFTFNPNEAQAAIANGELPASTRSFAFSDG---TIGNTHFVAIPFNANA 314 (401)
T ss_pred HHCHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCEEEEECCCC---CCCCCCCEEEECCCCC
T ss_conf 8577888440126899999999984798778840387778889866999974026742698---2167650772079998
Q ss_pred HHHHHHHHHCCCCHHHHHH
Q ss_conf 8999998740899899999
Q gi|254780342|r 239 PNISRLLKNIKFSVALENE 257 (309)
Q Consensus 239 P~~~~~L~~~~ls~~~~~~ 257 (309)
T Consensus 315 kagA~VvaNfLLSPEAQ~~ 333 (401)
T PRK11622 315 KAGAKVVANFLLSPEAQLR 333 (401)
T ss_pred HHHHHHHHHHHCCHHHHHH
T ss_conf 7789999999639999997