HHsearch alignment for GI: 254780342 and conserved domain: PRK12680

>PRK12680 transcriptional regulator CysB-like protein; Reviewed.
Probab=96.13  E-value=0.12  Score=30.51  Aligned_cols=209  Identities=9%  Similarity=0.027  Sum_probs=129.1

Q ss_pred             CCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEE
Q ss_conf             34588379942588699999999999996106984899856405788885149813999840464135666655304702
Q gi|254780342|r   22 ADSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGSIK  101 (309)
Q Consensus        22 ~~~~~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~~~~~~~  101 (309)
T Consensus        89 ~~~~G~L~Ig~~~t~a~~~LP~vi~~f~~~yP~V~l~l~~~~~~~l~e~l~~g~~Diai~~~~~~~~--------~~-~~  159 (327)
T PRK12680         89 RESQGQLTLTTTHTQARFVLPPAVAQIKQAYPQVSVHLQQAAESAALDLLGQGDADIAVVSTAGGEP--------SA-GI  159 (327)
T ss_pred             CCCCEEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCEEEECCCCCCC--------CC-CE
T ss_conf             8873379999842277775689999999868996799998982889999978994099944777799--------76-54


Q ss_pred             EECCCCCCCEEEEEEEHHHH---HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf             30135668535678634464---123455356555566544201357854320055587664035452210010366520
Q gi|254780342|r  102 LVAENLQGAKYMLAVNDVGF---ALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELA  178 (309)
Q Consensus       102 ~~~~~~~~~~~~~~v~~~~~---~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~  178 (309)
T Consensus       160 ~-~pl~~~-~~~vvvP~~HpL~~~~~~i~L~~La~------~plI~~~~g~~~r~~id~af~~~Gl~P~-iv~ea~~---  227 (327)
T PRK12680        160 A-VPLYRW-RRLVVVPRGHALDTPRTAPDMAALAE------HPLISYDSSTRPGSSLQRAFAQVGLEPS-IALTALD---  227 (327)
T ss_pred             E-EEEEEC-CEEEEEECCCCCCCCCCCCCHHHHHC------CCEEECCCCCCHHHHHHHHHHHCCCCCC-EEEEECC---
T ss_conf             7-675223-57999978981005899999999808------9889638998679999999997799764-7999995---


Q ss_pred             HHHHHHHHHHCCCCEEE-EEECCCHHHHCCCCEEECCCCCCCCCCHHHHHHHHCH-HHHHHCHHHHHHHHHC--CCCHHH
Q ss_conf             18999999965993699-9412422320158514007865467786583544277-7787488999998740--899899
Q gi|254780342|r  179 SFSQIRRDQRNNIPAVF-LSWEPHPINSDLNIHYLPGGEEISGFGEASVYTVVRS-DYLDKCPNISRLLKNI--KFSVAL  254 (309)
Q Consensus       179 ~~a~l~~A~~~~~~~v~-~~wsp~~~~~~~dl~~Ledp~~~~~~p~~~~~~vv~~-~~~~~~P~~~~~L~~~--~ls~~~  254 (309)
T Consensus       228 -~d~Ik~~V~~GlGV~Ivp~mA~~~~--d~~l~~~~~~-~l--~~~~~~~~~~~~~~~lr~~--~~~fi~~~~p~l~~~~  299 (327)
T PRK12680        228 -ADLIKTYVRAGLGVGLVAEMAVNAF--DEDLRAWPAP-AP--IAECIAWAVLPRDRVLRDY--ALDLVHVLAPQIDKRD  299 (327)
T ss_pred             -HHHHHHHHHHCCEEEECHHHHHCCC--CCCEEEEECC-CC--CCCCEEEEEEECCCHHHHH--HHHHHHHHCCCCCHHH
T ss_conf             -9999999994986188164762876--8983894064-57--7756059999788468999--9999998668889999


Q ss_pred             HHHHH
Q ss_conf             99999
Q gi|254780342|r  255 ENEMM  259 (309)
Q Consensus       255 ~~~l~  259 (309)
T Consensus       300 ~~~~~  304 (327)
T PRK12680        300 LRRVL  304 (327)
T ss_pred             HHHHH
T ss_conf             99982