HHsearch alignment for GI: 254780342 and conserved domain: pfam09084

>pfam09084 NMT1 NMT1/THI5 like. This family contains the NMT1 and THI5 proteins. These proteins are proposed to be required for the biosynthesis of the pyrimidine moiety of thiamine. They are regulated by thiamine.
Probab=98.96  E-value=5.1e-08  Score=71.97  Aligned_cols=179  Identities=11%  Similarity=0.066  Sum_probs=113.8

Q ss_pred             HHHHHHCCCCEEEEEEC-CHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEECCCCCCCEEEEEEEHHHHHCC
Q ss_conf             99996106984899856-40578888514981399984046413566665530470230135668535678634464123
Q gi|254780342|r   46 SVILEEILGYKTNIKLL-AVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGSIKLVAENLQGAKYMLAVNDVGFALG  124 (309)
Q Consensus        46 ~~iLE~~lGy~Ve~~~~-~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  124 (309)
T Consensus        13 ~G~f~~~-GL~Ve~~~~~~~~~~~~al~sG~~D~a~~~~~~----~~~~~~~g~~~~~i~~~~~~~~~~~~v~~---~~~   84 (216)
T pfam09084        13 KGYFKEE-GLDVEIVEPADPSDAVQLVAAGKADFGVSYQPS----LLLARAKGLPVVSVAALIQHPPNGLISLK---DSG   84 (216)
T ss_pred             CCCHHHC-CCCEEEEECCCCHHHHHHHHCCCCCEEECCCHH----HHHHHHCCCEEEEEEECCCCCCEEEEEEC---CCC
T ss_conf             7946884-980899966882789999976986778537199----99999789849999964358972899978---889


Q ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCHHH
Q ss_conf             45535655556654420135785432005558766403545221001036652018999999965993699941242232
Q gi|254780342|r  125 IKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELASFSQIRRDQRNNIPAVFLSWEPHPIN  204 (309)
Q Consensus       125 i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~~a~l~~A~~~~~~~v~~~wsp~~~~  204 (309)
T Consensus        85 i~s~~DL-------kGk~i~~~~~~~~~~~l~~~L~~~Gl~~~dv~~v~~~~~----~~~~al~~G~vDa~~~~~~~~~~  153 (216)
T pfam09084        85 IKSPKDL-------KGKRIGYSGSPFEEALLKALLAKAGGDPSDVTLVNVGGT----SLSPALLTGKVDAAIGGYYNWEG  153 (216)
T ss_pred             CCCHHHH-------CCCEEEEECCCHHHHHHHHHHHHCCCCHHHEEEEECCHH----HHHHHHHCCCCCEEEECCCCHHH
T ss_conf             8997895-------898899637972899999999985999899089967848----88889856995589962467579


Q ss_pred             HC-----CCCEEE-CCCCCCCCCCHHHHHHHHCHHHHHHCHHHHHHH
Q ss_conf             01-----585140-078654677865835442777787488999998
Q gi|254780342|r  205 SD-----LNIHYL-PGGEEISGFGEASVYTVVRSDYLDKCPNISRLL  245 (309)
Q Consensus       205 ~~-----~dl~~L-edp~~~~~~p~~~~~~vv~~~~~~~~P~~~~~L  245 (309)
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~f  198 (216)
T pfam09084       154 VELELEGVDLNIFALADYGVPDYYS--LVLITNDATLKKNPELVKAF  198 (216)
T ss_pred             HHHHHCCCCEEEEEHHHCCCCCCCC--EEEEECHHHHHHCHHHHHHH
T ss_conf             9998568865897065438887662--29999899998898999999