HHsearch results for GI: 254780342 and protein with PDBid: 1amf_A
>1amf_A Molybdate transport protein MODA; periplasmic, binding protein; 1.75A {Escherichia coli} SCOP: c.94.1.1 PDB: 1wod_A
Probab=96.47 E-value=0.038 Score=32.31 Aligned_cols=217 Identities=9% Similarity=-0.005 Sum_probs=103.5
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCC-CEEEEEEECCCCHHHHHHHHHCCCEEEEC
Q ss_conf 83799425886999999999999961069848998564057888851498-13999840464135666655304702301
Q gi|254780342|r 26 TPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKG-IDIFMGYWYPSLEKFIAPYLEEGSIKLVA 104 (309)
Q Consensus 26 ~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~G~-iD~~~e~w~p~~~~~~~~~~~~~~~~~~~ 104 (309)
++|+|-...-. ..++.++. +..|++.|++|+++.+++..+...+..|. .|+..... .........+..+ ...
T Consensus 3 g~l~v~~a~s~-~~~~~~l~-~~Fek~~gi~V~~~~g~s~~l~~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~-~~~ 75 (233)
T 1amf_A 3 GKITVFAAASL-TNAMQDIA-TQFKKEKGVDVVSSFASSSTLARQIEAGAPADLFISAD----QKWMDYAVDKKAI-DTA 75 (233)
T ss_dssp CEEEEEEEGGG-HHHHHHHH-HHHHHHHCCEEEEEEECHHHHHHHHHHTCCCSEEECSS----HHHHHHHHHTTCB-CGG
T ss_pred CEEEEEEECCH-HHHHHHHH-HHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCEEEECC----HHHHHHHHHCCCC-CCC
T ss_conf 77999996263-99999999-99988119779999777599999997399986899664----5556777752565-666
Q ss_pred C--CCCCCEEEEEEEHHHH--HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHH
Q ss_conf 3--5668535678634464--12345535655556654420135785432005558766403545221001036652018
Q gi|254780342|r 105 E--NLQGAKYMLAVNDVGF--ALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELASF 180 (309)
Q Consensus 105 ~--~~~~~~~~~~v~~~~~--~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~~ 180 (309)
. ........+.++.... ....+++.++.+.....+. .++.+................+......... ....-.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~ 152 (233)
T 1amf_A 76 TRQTLLGNSLVVVAPKASVQKDFTIDSKTNWTSLLNGGRL-AVGDPEHVPAGIYAKEALQKLGAWDTLSPKL--APAEDV 152 (233)
T ss_dssp GCEEEEEECEEEEEETTCCCCCCCCSTTCCHHHHHTTCCE-EEECTTTCHHHHHHHHHHHHTTCHHHHGGGE--EEESSH
T ss_pred CEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCE-EEECCCCCHHHHHHHHHHHHCCCHHHHCCCC--CCCCCH
T ss_conf 4245204412553034211454455425569862469938-9989987518999999999727512323010--225550
Q ss_pred HHHHHHHHCCCCEEEEEECCCHHHHCCCCEEECCCCCCCCCCHHHHHHHHCHHHHHHCHHHHHHHHHCCCCHHHHHH
Q ss_conf 99999996599369994124223201585140078654677865835442777787488999998740899899999
Q gi|254780342|r 181 SQIRRDQRNNIPAVFLSWEPHPINSDLNIHYLPGGEEISGFGEASVYTVVRSDYLDKCPNISRLLKNIKFSVALENE 257 (309)
Q Consensus 181 a~l~~A~~~~~~~v~~~wsp~~~~~~~dl~~Ledp~~~~~~p~~~~~~vv~~~~~~~~P~~~~~L~~~~ls~~~~~~ 257 (309)
.........|+.++...|.............+..|.+......+.+. ++. ...+|.+.+|++=+ +|.+-+.-
T Consensus 153 ~~~~~~~~~g~~~~~~~~~s~~~~~~~~~~~~~~p~~~~~~~~~~~~-i~k---~~~~~~A~~Fidfl-lS~e~Q~i 224 (233)
T 1amf_A 153 RGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVA-VVE---GHNNATVKAFYDYL-KGPQAAEI 224 (233)
T ss_dssp HHHHHHHHTTSSSEEEEEHHHHHHCSSEEEEEECCGGGSCCEEEEEE-EBT---TCCSHHHHHHHHHH-TSHHHHHH
T ss_pred HHHHHHHHHCCCCEEEHHHHHHHHHCCCCCEEEECCCCCEEEEEEEE-EEC---CCCCHHHHHHHHHH-CCHHHHHH
T ss_conf 47788876246628744678898730457539857988637678899-987---99999999999997-89999999