HHsearch results for GI: 254780342 and protein with PDBid: 1p99_A
>1p99_A Hypothetical protein PG110; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Staphylococcus aureus subsp} SCOP: c.94.1.1
Probab=99.15 E-value=1.4e-10 Score=87.13 Aligned_cols=224 Identities=8% Similarity=0.055 Sum_probs=119.1
Q ss_pred HHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHHHCCCCEEEEEEECCCCHHHHH
Q ss_conf 9863035834588379942588699999999999996106984899856-405788885149813999840464135666
Q gi|254780342|r 14 FSISYARDADSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLL-AVPVTFRSLKNKGIDIFMGYWYPSLEKFIA 92 (309)
Q Consensus 14 ~~~~~~~~~~~~~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~~-~~~~~~~al~~G~iD~~~e~w~p~~~~~~~ 92 (309)
+....++...+.++|+||...|+.+.. ..++..+|+. ||+||++.. +.....+||.+|+||+..-.+.|....+.+
T Consensus 27 ~~~~~~~~~~~~k~i~IG~~~~~~~~~--~~~~~~~kk~-Gl~Ve~~~F~d~~~~~~AL~~G~ID~~~~~~~p~l~~~~k 103 (295)
T 1p99_A 27 IQRPTSTGSNNDKKVTIGVASNDTKAW--EKVKELAKKD-DIDVEIKHFSDYNLPNKALNDGDIDMNAFQHFAFLDQYKK 103 (295)
T ss_dssp -------------CEEEEESSSCCHHH--HHHHHHHGGG-TCCEEEEECSSTTSHHHHHHTTSSSEEEEEEHHHHHHHHH
T ss_pred CCCCCCCCCCCCCEEEEEECCCCHHHH--HHHHHHHHHC-CCEEEEEEECCCHHHHHHHHCCCCCEEECCCHHHHHHHHH
T ss_conf 578888888999649999679838999--9999999975-9889999817827799999759967675178999999997
Q ss_pred HHHHCCCEEEECCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC-CCC----
Q ss_conf 655304702301356685356786344641234553565555665442013578543200555876640354-522----
Q gi|254780342|r 93 PYLEEGSIKLVAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKF-SLK---- 167 (309)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l-~~~---- 167 (309)
. .....+..++..+... .+.+. ....++.++. +++.++.+.+..........+...++ .+.
T Consensus 104 ~-~~g~~l~~v~~~~~~~-~~~~~------~~~~~i~d~~------~Gk~Ia~p~~~s~~~~~l~~l~~~gli~l~~~~~ 169 (295)
T 1p99_A 104 A-HKGTKISALSTTVLAP-LGIYS------DKIKDVKKVK------DGAKVVIPNDVSNQARALKLLEAAGLIKLKKDFG 169 (295)
T ss_dssp H-CTTCCEEEEEEEEECC-CEEEC------SSCSCGGGCC------TTCEEEEECSHHHHHHHHHHHHHTTSCEECTTCC
T ss_pred H-CCCCEEEEECCCCCCC-CCCCC------CCCCCHHHCC------CCCEEEECCCCCHHHHHHHHHHHCCCEEECCCCC
T ss_conf 6-7995599944521123-10126------5666321125------8985783368728999999998669277458888
Q ss_pred -------------CEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHCCCC----EEECCCCCCCCCCHHHHHHHH
Q ss_conf -------------100103665201899999996599369994124223201585----140078654677865835442
Q gi|254780342|r 168 -------------GFRLIEASELASFSQIRRDQRNNIPAVFLSWEPHPINSDLNI----HYLPGGEEISGFGEASVYTVV 230 (309)
Q Consensus 168 -------------~~~~~~~s~~~~~a~l~~A~~~~~~~v~~~wsp~~~~~~~dl----~~Ledp~~~~~~p~~~~~~vv 230 (309)
...+.+...+ +.+...+++++...|.|.......+. .+++++.. ....++-...++
T Consensus 170 ~~~t~~DI~~n~~~~~~~~~~~a------~~a~a~~~vDaa~i~~p~~~~a~~~~~~~~l~~e~~~~-~~~~~~~~~~~~ 242 (295)
T 1p99_A 170 LAGTVKDITSNPKHLKITAVDAQ------QTARALSDVDIAVINNGVATKAGKDPKNDPIFLEKSNS-DAVKPYINIVAV 242 (295)
T ss_dssp TTCCGGGEEECTTCCEEEEECGG------GTTGGGGTSSEEEECHHHHHHTTCCTTTSCSEECCCSS-GGGGGGEEEEEE
T ss_pred CCCCHHHHHHCCCCCCCCCCCHH------HHHHHCCCCCEEEECCHHHHHHCCCCCCCEEEECCCCC-CCCCCEEEEEEE
T ss_conf 77787666544444454564066------77873277648995543999827886666588647766-667753799997
Q ss_pred CHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 7777874889999987408998999999999984599989999999998599
Q gi|254780342|r 231 RSDYLDKCPNISRLLKNIKFSVALENEMMKLILNNKQDRQFVGRTMLRTHPD 282 (309)
Q Consensus 231 ~~~~~~~~P~~~~~L~~~~ls~~~~~~l~~~v~~~g~~~~~vA~~wL~~n~~ 282 (309)
|. ..++.|.+.+|++.++ .+-+++|+++|..
T Consensus 243 r~-~~~~~e~vk~lv~a~~--------------------s~E~~~~I~~~~~ 273 (295)
T 1p99_A 243 ND-KDLDNKTYAKIVELYH--------------------SKEAQKALQEDVK 273 (295)
T ss_dssp EG-GGTTCHHHHHHHHHHH--------------------SHHHHHHHHHHHT
T ss_pred CC-CCCCCHHHHHHHHHHC--------------------CHHHHHHHHHCCC
T ss_conf 84-0019799999999978--------------------9999999997148