HHsearch results for GI: 254780342 and protein with PDBid: 1xs5_A
>1xs5_A 29 kDa protein, membrane lipoprotein TPN32; periplasmic binding protein, methionine, membrane protein; 1.85A {Treponema pallidum} SCOP: c.94.1.1
Probab=98.66 E-value=2.6e-07 Score=65.96 Aligned_cols=197 Identities=10% Similarity=0.050 Sum_probs=109.9
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEE
Q ss_conf 88379942588699999999999996106984899856-40578888514981399984046413566665530470230
Q gi|254780342|r 25 CTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLL-AVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGSIKLV 103 (309)
Q Consensus 25 ~~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~~-~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~~~~~~~~~ 103 (309)
.+|||||...++...++. +.+..+|+. |++||++.. +.....+||.+|+||+..-...|........ ....++..
T Consensus 2 ~~ti~iG~~~~~~~~~l~-~~k~~~k~~-Gl~Ve~~~f~~g~~~~~Al~sG~iD~~~~g~~p~l~~~~~~--~~~~l~~v 77 (241)
T 1xs5_A 2 DETVGVGVLSEPHARLLE-IAKEEVKKQ-HIELRIVEFTNYVALNEAVMRGDILMNFFQHVPHMQQFNQE--HNGDLVSV 77 (241)
T ss_dssp CEEEEEEECSTTHHHHHH-HHHHHHHTT-TEEEEEEECSCHHHHHHHHHHTSSSEEEEEEHHHHHHHHHH--HTCCEEEE
T ss_pred CCEEEEEECCCCHHHHHH-HHHHHHHHC-CCEEEEEEECCCHHHHHHHHCCCCCEEEECCHHHHHHHHHH--CCCCEEEE
T ss_conf 932999960698599999-999999974-98899999388177899997699767985578899998854--69738999
Q ss_pred CCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC-CCCCCC--------------
Q ss_conf 13566853567863446412345535655556654420135785432005558766403-545221--------------
Q gi|254780342|r 104 AENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNN-KFSLKG-------------- 168 (309)
Q Consensus 104 ~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~l~~~~-------------- 168 (309)
+..+... .+++.. .+.++.++.+ ++.++.+.+...+......+... .+++..
T Consensus 78 ~~~~~~~-~~l~~~------~~~s~~d~~~------gk~ia~~~~~s~~~~~~~~l~~~~~~~l~~~~~~~~~~~Di~~~ 144 (241)
T 1xs5_A 78 GNVHVEP-LALYSR------TYRHVSDFPA------GAVIAIPNDSSNEARALRLLEAAGFIRMRAGSGLFATVEDVQQN 144 (241)
T ss_dssp EEEEECC-CEEECS------SCCSGGGCCT------TCEEEEECSHHHHHHHHHHHHHTTSCEECTTCCTTCCGGGEEEC
T ss_pred EEECCCC-EEEEEC------CCCCHHHHCC------CCEEEECCCCCHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHC
T ss_conf 8841465-488836------8677667348------87698258882799999999975881343688876776566534
Q ss_pred ---EEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHCCCC--EEECCCCCCCCCCHHHHHHHHCHHHHHHCHHHHH
Q ss_conf ---00103665201899999996599369994124223201585--1400786546778658354427777874889999
Q gi|254780342|r 169 ---FRLIEASELASFSQIRRDQRNNIPAVFLSWEPHPINSDLNI--HYLPGGEEISGFGEASVYTVVRSDYLDKCPNISR 243 (309)
Q Consensus 169 ---~~~~~~s~~~~~a~l~~A~~~~~~~v~~~wsp~~~~~~~dl--~~Ledp~~~~~~p~~~~~~vv~~~~~~~~P~~~~ 243 (309)
..+.... ....+...++++.+..|.|......... ..|-+.... +++....++|+. .++.+.+.+
T Consensus 145 ~~~~~~~~~~------~a~~a~~~~~vda~~~~~p~~~~a~~~~~~~~l~~~~~~---~~~~~~lv~r~~-~~~~~~i~~ 214 (241)
T 1xs5_A 145 VRNVVLQEVE------SALLPRVFDQVDGAVINGNYAIMAGLSARRDGLAVEPDA---SAYANVLVVKRG-NEADARVQA 214 (241)
T ss_dssp TTCCEEEEEC------GGGHHHHGGGSSEEEECHHHHHHTTCCTTTTCSEECSCG---GGGCEEEEEETT-CTTCHHHHH
T ss_pred CCCCCCCCCC------HHHHHHHCCCCCEEEECCCHHHHHCCCCCCCEEEECCCC---CCEEEEEEECCH-HHCCHHHHH
T ss_conf 3445425744------767777427775799646489985588766779963789---863799998340-109899999
Q ss_pred HHHHC
Q ss_conf 98740
Q gi|254780342|r 244 LLKNI 248 (309)
Q Consensus 244 ~L~~~ 248 (309)
+++.+
T Consensus 215 l~~a~ 219 (241)
T 1xs5_A 215 VLRAL 219 (241)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99997