HHsearch results for GI: 254780342 and protein with PDBid: 2b4l_A
>2b4l_A Glycine betaine-binding protein; substrate-binding protein, closed liganded, ABC-transporter, compatible solutes, transport protein; 2.00A {Bacillus subtilis} PDB: 2b4m_A* 3chg_D
Probab=99.83 E-value=3.6e-20 Score=149.57 Aligned_cols=110 Identities=20% Similarity=0.345 Sum_probs=100.9
Q ss_pred CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCC
Q ss_conf 58345883799425886999999999999961069848998564057888851498139998404641356666553047
Q gi|254780342|r 20 RDADSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGS 99 (309)
Q Consensus 20 ~~~~~~~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~~~~~ 99 (309)
....+++||+||..+|+++.++++|++++||+ +||+||++++++.++|++|++|+||+++|+|.|+++..+.+.. ++.
T Consensus 159 ~~~~~~~~i~i~~~~W~~~~a~t~v~~~iLe~-~Gy~Ve~~~~~~~~~~~~l~~GdiD~~~e~W~p~~~~~~~~~~-~g~ 236 (268)
T 2b4l_A 159 VQKVKGDKINLAYVAWDSEIASTNVIGKVLED-LGYEVTLTQVEAGPMWTAIATGSADASLSAWLPNTHKAYAAKY-KGK 236 (268)
T ss_dssp CCCCSSCEEEEEECCCHHHHHHHHHHHHHHHH-HTCEEEEEECCTTHHHHHHHHTSSSEEEEEEETTTTHHHHHHT-TTS
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHH-CCCCEEEEECCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHH-CCC
T ss_conf 54677775156424876189999999999998-6995378877848899999779961863015686408888860-995
Q ss_pred EEEECCCCCCCEEEEEEEHHHHHCCCCCHHHHHH
Q ss_conf 0230135668535678634464123455356555
Q gi|254780342|r 100 IKLVAENLQGAKYMLAVNDVGFALGIKSYQDIAK 133 (309)
Q Consensus 100 ~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~ 133 (309)
++.++.++.+...+|+||+|++ +|+|++||++
T Consensus 237 ~~~lg~~~~~~~~G~~VP~Y~~--di~si~DL~k 268 (268)
T 2b4l_A 237 YDDIGTSMTGVKMGLVVPQYMK--NVNSIEDLKK 268 (268)
T ss_dssp EEEEEEEEEEEEEEEEEETTCT--TCCBGGGGTC
T ss_pred EEECCCCCCCCEEEEEECCCCC--CCCCHHHHCC
T ss_conf 6981525668579999364446--8889788377