HHsearch results for GI: 254780342 and protein with PDBid: 2g29_A
>2g29_A Nitrate transport protein NRTA; solute-binding protein, alpha-beta protein; 1.50A {Synechocystis SP}
Probab=98.36 E-value=1.7e-05 Score=54.14 Aligned_cols=218 Identities=12% Similarity=0.015 Sum_probs=117.6
Q ss_pred CCCCEEEECCCCCHHHHH-HHHHHHHHHHCCCC-EEEEEEC-CHHHHH----HHHHCCCCEEEEEEECCCCHHHHHHH-H
Q ss_conf 588379942588699999-99999999610698-4899856-405788----88514981399984046413566665-5
Q gi|254780342|r 24 SCTPVRFADTGWTDIAAT-TAMTSVILEEILGY-KTNIKLL-AVPVTF----RSLKNKGIDIFMGYWYPSLEKFIAPY-L 95 (309)
Q Consensus 24 ~~~~I~ig~~~wte~~v~-a~i~~~iLE~~lGy-~Ve~~~~-~~~~~~----~al~~G~iD~~~e~w~p~~~~~~~~~-~ 95 (309)
+..+|+||....+....+ -..-+-..|+. |. +|+++.. +...+. .++.+|++|+.+-............. .
T Consensus 31 E~~~lriGyiPl~d~APl~VA~ekGfF~~~-GL~dVel~~~~s~~~~~d~l~~g~a~G~lD~a~~~~~~~~a~~lg~~~~ 109 (417)
T 2g29_A 31 EVTTAKLGFIALTDAAPLIIAKEKGFYAKY-GMPDVEVLKQASWGTTRDNLVLGSASGGIDGAHILTPMPYLITMGTVTD 109 (417)
T ss_dssp SCSCCEEEECSSGGGHHHHHHHHTTHHHHT-TCTTCEEEECSCHHHHHHHHHHCGGGTSCSEEEEETHHHHHHHHCTTSS
T ss_pred CCCEEEEEEEECCCHHHHHHHHHCCHHHHC-CCCEEEEEECCCHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHC
T ss_conf 674389997665053999999977958775-9974689965782779999997642466140002511689999877643
Q ss_pred H-CCCEEEECCCCCCCEEEEEEEHHHHHCCC-CCHHHHHHHHHHHHHCCCCCCCCCC-CCHHHHHHHHHCCCCCC-CEEE
Q ss_conf 3-04702301356685356786344641234-5535655556654420135785432-00555876640354522-1001
Q gi|254780342|r 96 E-EGSIKLVAENLQGAKYMLAVNDVGFALGI-KSYQDIAKYKKELGAKIYGIEPGNE-GNQRILDMINNNKFSLK-GFRL 171 (309)
Q Consensus 96 ~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~i-~~~~dl~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~l~~~-~~~~ 171 (309)
. ...+........+ ...+.+........+ .......+....++++.+|...... ........+...|+... ..++
T Consensus 110 ~~~~~~~~~~~~~~~-g~~I~~s~~~~~~~~~~~~~~~i~s~~dLkGk~igv~~~~s~~~~~lr~~L~~~Gldp~~DV~i 188 (417)
T 2g29_A 110 GKPTPMYILARLNVN-GQGIQLGNNYKDLKVGTDAAPLKEAFAKVTDPKVAMTFPGGTHDMWIRYWLAAGGMEPGKDFST 188 (417)
T ss_dssp SCCCCEEEEEECCBS-CEEEEECGGGGGGCCCSCCTTHHHHHHTSSSCEEEESSTTSHHHHHHHHHHHHTTCCBTTTBEE
T ss_pred CCCCCEEEEEECCCC-CCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEE
T ss_conf 789888999873668-7479983232000344565432109888399989997898649999999999669986664389
Q ss_pred ECCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHH--CCCCEEECCCCCCCCCCHHHHHHHHCHHHHHHCHHHHH-HHHHC
Q ss_conf 0366520189999999659936999412422320--15851400786546778658354427777874889999-98740
Q gi|254780342|r 172 IEASELASFSQIRRDQRNNIPAVFLSWEPHPINS--DLNIHYLPGGEEISGFGEASVYTVVRSDYLDKCPNISR-LLKNI 248 (309)
Q Consensus 172 ~~~s~~~~~a~l~~A~~~~~~~v~~~wsp~~~~~--~~dl~~Ledp~~~~~~p~~~~~~vv~~~~~~~~P~~~~-~L~~~ 248 (309)
+......+. .|+++|+.+.+..|.|-.... ....+.+....+.....+. ...++|++|.++||+..+ |++.+
T Consensus 189 v~~~p~~~~----~aL~~G~iDa~~~~eP~~~~a~~~g~g~~~~~~~di~~~~p~-~vl~~~~~~~~~nPe~v~afv~Al 263 (417)
T 2g29_A 189 IVVPPAQMV----ANVKVNAMESFCVGEPWPLQTVNQGVGYQALTTGQLWKDHPE-KAFGMRADWVDQNPKAAKALLMAV 263 (417)
T ss_dssp EECCGGGHH----HHHHTTSCSEEEEETTHHHHHHHHTSCEEEEEGGGTBTTCBC-EEEEEEHHHHHHCHHHHHHHHHHH
T ss_pred EECCHHHHH----HHHHCCCCCEEEECCHHHHHHHHCCCCEEEEECHHHCCCCCC-EEEEECHHHHHHCHHHHHHHHHHH
T ss_conf 855779999----999668703899544499999864885898510463289863-699964898853989999999999