HHsearch results for GI: 254780342 and protein with PDBid: 2iee_A
>2iee_A ORF2, probable ABC transporter extracellular-binding protein YCKB; SR574, NESG, X-RAY, structural genomics, PSI-2; 2.20A {Bacillus subtilis}
Probab=95.98 E-value=0.017 Score=34.66 Aligned_cols=189 Identities=12% Similarity=0.041 Sum_probs=97.0
Q ss_pred CCCEEEECC-C---CC---H----H---HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCHHH
Q ss_conf 883799425-8---86---9----9---9999999999961069848998564057888851498139998404641356
Q gi|254780342|r 25 CTPVRFADT-G---WT---D----I---AATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKF 90 (309)
Q Consensus 25 ~~~I~ig~~-~---wt---e----~---~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~G~iD~~~e~w~p~~~~~ 90 (309)
.+.|+||.. + |+ + + -+...++..+.++ +|++++++..+...++.+|.+|++|+.+..- +.....
T Consensus 20 ~~~l~V~~~~~~~P~~~~~~~~~~g~~~G~~vDl~~~ia~~-lg~~~~~~~~~~~~~~~~l~~g~~D~~~~~~-~~~~~r 97 (271)
T 2iee_A 20 KGKIVVATSGTLYPTSYHDTDSGSDKLTGYEVEVVREAAKR-LGLKVEFKEMGIDGMLTAVNSGQVDAAANDI-DVTKDR 97 (271)
T ss_dssp HTEEEEEECSCBTTTBEEETTTTCCEEECHHHHHHHHHHHH-TTCEEEEEECCSTTHHHHHHHTSSSEECSSC-BCCHHH
T ss_pred CCEEEEEECCCCCCCEEECCCCCCCCEEEEHHHHHHHHHHH-HCCCEEEEECCHHHHHHHHHCCCCCEEECCC-CCCHHH
T ss_conf 99799998899889678836899996788799999999998-3996489989999999999769977440245-468788
Q ss_pred HHHHHHCCCEEEECCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEE
Q ss_conf 66655304702301356685356786344641234553565555665442013578543200555876640354522100
Q gi|254780342|r 91 IAPYLEEGSIKLVAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFR 170 (309)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ 170 (309)
...+.... .+......+++... ....+.++++|. +..++...+... ...++.+... ..
T Consensus 98 ------~~~~~~s~-p~~~~~~~~~~~~~-~~~~~~~~~dl~-------g~~v~v~~g~~~----~~~l~~~~~~---~~ 155 (271)
T 2iee_A 98 ------EEKFAFST-PYKYSYGTAIVRKD-DLSGIKTLKDLK-------GKKAAGAATTVY----MEVARKYGAK---EV 155 (271)
T ss_dssp ------HTTEEECC-CSEEEEEEEEECTT-TGGGCSSGGGGT-------TCEEESCTTSHH----HHHHHHTTCE---EE
T ss_pred ------HHHHHCCC-CCCCCCCCEEEECC-CCCCCCCHHHHC-------CCEEEECCCCHH----HHHHHHCCCC---CE
T ss_conf ------76542056-62215762367504-777779878807-------945897168589----9999970898---58
Q ss_pred EECCCCCCHHHHHHHHHHCCCCEEEEEECCC--HHHHCC---CCEEECCCCCCCCCCHHHHHHHHCHHHHHHCHHHHHHH
Q ss_conf 1036652018999999965993699941242--232015---85140078654677865835442777787488999998
Q gi|254780342|r 171 LIEASELASFSQIRRDQRNNIPAVFLSWEPH--PINSDL---NIHYLPGGEEISGFGEASVYTVVRSDYLDKCPNISRLL 245 (309)
Q Consensus 171 ~~~~s~~~~~a~l~~A~~~~~~~v~~~wsp~--~~~~~~---dl~~Ledp~~~~~~p~~~~~~vv~~~~~~~~P~~~~~L 245 (309)
+.... ...++..++.+|+.+++....+- +.+..+ +++...+.. + .+.....++++ .+|++.+.|
T Consensus 156 i~~~~---s~~~~l~~L~~grvD~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~k----~~~~L~~~l 224 (271)
T 2iee_A 156 IYDNA---TNEQYLKDVANGRTDVILNDYYLQTLALAAFPDLNITIHPDIK--Y--MPNKQALVMKK----SNAALQKKM 224 (271)
T ss_dssp ECSSC---CHHHHHHHHHHTSSCEEEEEHHHHHHHHHHCTTSSCEECSSCC--E--EEEEECCEEET----TCHHHHHHH
T ss_pred EEEEC---CHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCEEECCCCC--C--CCCEEEEEEEC----CCHHHHHHH
T ss_conf 99823---6088999997695349992499999999868997468666766--5--66128999948----999999999
Q ss_pred HHC
Q ss_conf 740
Q gi|254780342|r 246 KNI 248 (309)
Q Consensus 246 ~~~ 248 (309)
++.
T Consensus 225 n~~ 227 (271)
T 2iee_A 225 NEA 227 (271)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999