HHsearch results for GI: 254780342 and protein with PDBid: 2iee_A

>2iee_A ORF2, probable ABC transporter extracellular-binding protein YCKB; SR574, NESG, X-RAY, structural genomics, PSI-2; 2.20A {Bacillus subtilis}
Probab=95.98  E-value=0.017  Score=34.66  Aligned_cols=189  Identities=12%  Similarity=0.041  Sum_probs=97.0

Q ss_pred             CCCEEEECC-C---CC---H----H---HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCHHH
Q ss_conf             883799425-8---86---9----9---9999999999961069848998564057888851498139998404641356
Q gi|254780342|r   25 CTPVRFADT-G---WT---D----I---AATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKF   90 (309)
Q Consensus        25 ~~~I~ig~~-~---wt---e----~---~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~G~iD~~~e~w~p~~~~~   90 (309)
                      .+.|+||.. +   |+   +    +   -+...++..+.++ +|++++++..+...++.+|.+|++|+.+..- +.....
T Consensus        20 ~~~l~V~~~~~~~P~~~~~~~~~~g~~~G~~vDl~~~ia~~-lg~~~~~~~~~~~~~~~~l~~g~~D~~~~~~-~~~~~r   97 (271)
T 2iee_A           20 KGKIVVATSGTLYPTSYHDTDSGSDKLTGYEVEVVREAAKR-LGLKVEFKEMGIDGMLTAVNSGQVDAAANDI-DVTKDR   97 (271)
T ss_dssp             HTEEEEEECSCBTTTBEEETTTTCCEEECHHHHHHHHHHHH-TTCEEEEEECCSTTHHHHHHHTSSSEECSSC-BCCHHH
T ss_pred             CCEEEEEECCCCCCCEEECCCCCCCCEEEEHHHHHHHHHHH-HCCCEEEEECCHHHHHHHHHCCCCCEEECCC-CCCHHH
T ss_conf             99799998899889678836899996788799999999998-3996489989999999999769977440245-468788


Q ss_pred             HHHHHHCCCEEEECCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEE
Q ss_conf             66655304702301356685356786344641234553565555665442013578543200555876640354522100
Q gi|254780342|r   91 IAPYLEEGSIKLVAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFR  170 (309)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~  170 (309)
                            ...+.... .+......+++... ....+.++++|.       +..++...+...    ...++.+...   ..
T Consensus        98 ------~~~~~~s~-p~~~~~~~~~~~~~-~~~~~~~~~dl~-------g~~v~v~~g~~~----~~~l~~~~~~---~~  155 (271)
T 2iee_A           98 ------EEKFAFST-PYKYSYGTAIVRKD-DLSGIKTLKDLK-------GKKAAGAATTVY----MEVARKYGAK---EV  155 (271)
T ss_dssp             ------HTTEEECC-CSEEEEEEEEECTT-TGGGCSSGGGGT-------TCEEESCTTSHH----HHHHHHTTCE---EE
T ss_pred             ------HHHHHCCC-CCCCCCCCEEEECC-CCCCCCCHHHHC-------CCEEEECCCCHH----HHHHHHCCCC---CE
T ss_conf             ------76542056-62215762367504-777779878807-------945897168589----9999970898---58


Q ss_pred             EECCCCCCHHHHHHHHHHCCCCEEEEEECCC--HHHHCC---CCEEECCCCCCCCCCHHHHHHHHCHHHHHHCHHHHHHH
Q ss_conf             1036652018999999965993699941242--232015---85140078654677865835442777787488999998
Q gi|254780342|r  171 LIEASELASFSQIRRDQRNNIPAVFLSWEPH--PINSDL---NIHYLPGGEEISGFGEASVYTVVRSDYLDKCPNISRLL  245 (309)
Q Consensus       171 ~~~~s~~~~~a~l~~A~~~~~~~v~~~wsp~--~~~~~~---dl~~Ledp~~~~~~p~~~~~~vv~~~~~~~~P~~~~~L  245 (309)
                      +....   ...++..++.+|+.+++....+-  +.+..+   +++...+..  +  .+.....++++    .+|++.+.|
T Consensus       156 i~~~~---s~~~~l~~L~~grvD~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~k----~~~~L~~~l  224 (271)
T 2iee_A          156 IYDNA---TNEQYLKDVANGRTDVILNDYYLQTLALAAFPDLNITIHPDIK--Y--MPNKQALVMKK----SNAALQKKM  224 (271)
T ss_dssp             ECSSC---CHHHHHHHHHHTSSCEEEEEHHHHHHHHHHCTTSSCEECSSCC--E--EEEEECCEEET----TCHHHHHHH
T ss_pred             EEEEC---CHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCEEECCCCC--C--CCCEEEEEEEC----CCHHHHHHH
T ss_conf             99823---6088999997695349992499999999868997468666766--5--66128999948----999999999


Q ss_pred             HHC
Q ss_conf             740
Q gi|254780342|r  246 KNI  248 (309)
Q Consensus       246 ~~~  248 (309)
                      ++.
T Consensus       225 n~~  227 (271)
T 2iee_A          225 NEA  227 (271)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             999