HHsearch results for GI: 254780342 and protein with PDBid: 2o1m_A
>2o1m_A Probable amino-acid ABC transporter extracellular-binding protein YTMK; NESG X-RAY O34852 YTMK_bacsu, structural genomics, PSI-2; 2.00A {Bacillus subtilis}
Probab=97.00 E-value=0.0028 Score=39.70 Aligned_cols=197 Identities=12% Similarity=0.041 Sum_probs=100.6
Q ss_pred CCCCCCCCEEEECC-CCC------H-H---HHHHHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCC
Q ss_conf 58345883799425-886------9-9---999999999996106-9848998564057888851498139998404641
Q gi|254780342|r 20 RDADSCTPVRFADT-GWT------D-I---AATTAMTSVILEEIL-GYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSL 87 (309)
Q Consensus 20 ~~~~~~~~I~ig~~-~wt------e-~---~v~a~i~~~iLE~~l-Gy~Ve~~~~~~~~~~~al~~G~iD~~~e~w~p~~ 87 (309)
+...+.++|+||.. +|+ + + -+...|+..+.++ + |+++++++.+...+.++|.+|++|+.+.....+
T Consensus 10 a~~~~~~~i~V~~~~~~pP~~~~~~~g~~~G~~vDl~~~ia~~-l~g~~v~~~~~~~~~~~~~l~~g~~D~i~~~~~~~- 87 (258)
T 2o1m_A 10 AGQKKVQTITVGTGTQFPNICFIDEKGDLTGYDVELIKELDKR-LPHYKFTFKTMEFSNLLVSLGQHKVDIVAHQMEKS- 87 (258)
T ss_dssp ----CCEEEEEEECSEETTTEEECTTSCEESHHHHHHHHHHHH-CTTEEEEEEECCHHHHHHHHHTTSSSEEEEEECCC-
T ss_pred CCCCCCCEEEEEECCCCCCEEEECCCCCEEEHHHHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHCCCCCEEEECCCCC-
T ss_conf 5456699899998999798069999996887599999999987-28985899978999999999779988896347678-
Q ss_pred HHHHHHHHHCCCEEEECCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 35666655304702301356685356786344641234553565555665442013578543200555876640354522
Q gi|254780342|r 88 EKFIAPYLEEGSIKLVAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLK 167 (309)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 167 (309)
.+... .+....+.+......+++.+. ...+.+++||+ ++.+|...+..............+. .
T Consensus 88 ~er~~------~~~fs~~~~~~~~~~~~~~~~--~~~i~~~~dL~-------gk~igv~~g~~~~~~l~~~~~~~~~--~ 150 (258)
T 2o1m_A 88 KEREK------KFLFNKVAYNHFPLKITVLQN--NDTIRGIEDLK-------GKRVITSATSNGALVLKKWNEDNGR--P 150 (258)
T ss_dssp HHHHH------HCEECSSCCEEEEEEEEEETT--CCSCSSGGGCT-------TCEEEECSSSHHHHHHHHHHHHTTC--C
T ss_pred HHHHH------HCCCCCCCCCCCCEEEEEEEC--CCCCCCHHHCC-------CCEEEECCCCHHHHHHHHHHHHCCC--C
T ss_conf 78875------313675422355428998513--67655154457-------9889870787499999999997188--7
Q ss_pred CEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCC--HHHHCCCC--EEECCCCCCCCCCHHHHHHHHCHHHHHHCHHHHH
Q ss_conf 1001036652018999999965993699941242--23201585--1400786546778658354427777874889999
Q gi|254780342|r 168 GFRLIEASELASFSQIRRDQRNNIPAVFLSWEPH--PINSDLNI--HYLPGGEEISGFGEASVYTVVRSDYLDKCPNISR 243 (309)
Q Consensus 168 ~~~~~~~s~~~~~a~l~~A~~~~~~~v~~~wsp~--~~~~~~dl--~~Ledp~~~~~~p~~~~~~vv~~~~~~~~P~~~~ 243 (309)
......... ..++..++.+|+.+++....+. +.....+. ..+..+. .......++++ ++|++.+
T Consensus 151 ~~~~~~~~~---~~~~~~~L~~grvD~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~k----~~~~L~~ 218 (258)
T 2o1m_A 151 FEIAYEGQG---ANETANQLKSGRADATISTPFAVDFQNKTSTIKEKTVGNVL-----SNAKVYFMFNK----NEQTLSD 218 (258)
T ss_dssp SEEEECCSS---TTHHHHHHHHTSCSBEEECHHHHHHHHHHCSSCEEEEEEEE-----EEEEEEEEECT----TCHHHHH
T ss_pred CCCEECCCC---HHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEECCCC-----CCCCEEEEEEC----CCHHHHH
T ss_conf 420103688---99999998659546999169999999852788658815667-----77518999959----9999999
Q ss_pred HHHH
Q ss_conf 9874
Q gi|254780342|r 244 LLKN 247 (309)
Q Consensus 244 ~L~~ 247 (309)
.+++
T Consensus 219 ~ln~ 222 (258)
T 2o1m_A 219 DIDK 222 (258)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9999