HHsearch results for GI: 254780342 and protein with PDBid: 2qry_A
>2qry_A Thiamine-binding periplasmic protein; thiamin binding protein, ABC transporter, transport protein; HET: TPS; 2.25A {Escherichia coli}
Probab=97.41 E-value=0.0046 Score=38.29 Aligned_cols=223 Identities=13% Similarity=0.072 Sum_probs=102.2
Q ss_pred CCCCCCCCEEEECCCCCHHHHH----HHHHHHHHHHCCCCEEEEEEC-CHHHHHHHH----HCCCCEEEEEEECCCCHHH
Q ss_conf 5834588379942588699999----999999996106984899856-405788885----1498139998404641356
Q gi|254780342|r 20 RDADSCTPVRFADTGWTDIAAT----TAMTSVILEEILGYKTNIKLL-AVPVTFRSL----KNKGIDIFMGYWYPSLEKF 90 (309)
Q Consensus 20 ~~~~~~~~I~ig~~~wte~~v~----a~i~~~iLE~~lGy~Ve~~~~-~~~~~~~al----~~G~iD~~~e~w~p~~~~~ 90 (309)
+.+..+.+++|-. | .+.+. +.-+..-.|+++|++|+.+.. ++..+...| .+++.|+....-....
T Consensus 17 ~~~~~~~~l~Vy~--~-~~~~~~~~~~~~i~~~FE~~~gi~V~~~~~~s~~~ll~kl~~e~~~~~~DVv~~~~~~~~--- 90 (330)
T 2qry_A 17 RGSHMKPVLTVYT--Y-DSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLL--- 90 (330)
T ss_dssp -----CCEEEEEE--C-HHHHSTTSSHHHHHHHHHTTSCSEEEEEECSCHHHHHHHHHHHGGGCCCSEEEEEEGGGH---
T ss_pred CCCCCCCEEEEEE--C-CCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCHHHH---
T ss_conf 5656798799997--8-765535577779999999987978999958998999999997279998329997567789---
Q ss_pred HHHHHHCCCEEEE---------C--------CCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC-
Q ss_conf 6665530470230---------1--------356685356786344641234553565555665442013578543200-
Q gi|254780342|r 91 IAPYLEEGSIKLV---------A--------ENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGN- 152 (309)
Q Consensus 91 ~~~~~~~~~~~~~---------~--------~~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~- 152 (309)
......+.+... . ..+.....++.+.........++|.||.+. .+++++....+.....
T Consensus 91 -~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yn~~~~~~~p~s~~dL~~p--~~~gki~~~~~~~~~~~ 167 (330)
T 2qry_A 91 -DAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVES--DQNWRVIYQDPRTSTPG 167 (330)
T ss_dssp -HHHHHHTCBCCCCCCGGGCCCTTCCCCSSCEEEEEEEEEEEEETTTCSSCCSSHHHHHHC--SSCCCEEEECTTTCHHH
T ss_pred -HHHHHCCCCCCCCCCHHHHCCCHHHCCCCEEEECCCEEEEEECCCCCCCCCCCHHHHHHC--CCCCEEEECCCCCCHHH
T ss_conf -999874752124576333036423236650320452478874332256899778998514--02412574277534778
Q ss_pred H-HHHHHHHHCC---------CCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHCC-----CCEEECCCCC
Q ss_conf 5-5587664035---------45221001036652018999999965993699941242232015-----8514007865
Q gi|254780342|r 153 Q-RILDMINNNK---------FSLKGFRLIEASELASFSQIRRDQRNNIPAVFLSWEPHPINSDL-----NIHYLPGGEE 217 (309)
Q Consensus 153 ~-~~~~~~~~~~---------l~~~~~~~~~~s~~~~~a~l~~A~~~~~~~v~~~wsp~~~~~~~-----dl~~Ledp~~ 217 (309)
. ........++ +......+..+ ......++.+|+..+...|..+...... .+.....+++
T Consensus 168 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Ge~~i~~~~~~~~~~~~~~~~~~~~~~~~~~eg 242 (330)
T 2qry_A 168 LGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKG-----WSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEG 242 (330)
T ss_dssp HHHHHHHHHHHGGGHHHHHHHHHTTEEEEESS-----HHHHHHHHHTTSCSEEEEETTHHHHHHHHHCCCCEEECCCTTC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC-----CHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCEEEECCCC
T ss_conf 99999999857956999999998726766666-----4688876504775389995157999998557985104406787
Q ss_pred CCCCCHHHHHHHHCHHHHHHCHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 46778658354427777874889999987408998999999999
Q gi|254780342|r 218 ISGFGEASVYTVVRSDYLDKCPNISRLLKNIKFSVALENEMMKL 261 (309)
Q Consensus 218 ~~~~p~~~~~~vv~~~~~~~~P~~~~~L~~~~ls~~~~~~l~~~ 261 (309)
....+. .+. ++ + -.+||+++..|=++-+|.+-+..+...
T Consensus 243 ~~~~~~-~~~-I~-k--~a~~~~~A~~Fidflls~E~Q~~~a~~ 281 (330)
T 2qry_A 243 HYLQVE-VAA-RT-A--ASKQPELAQKFLQFMVSPAFQNAIPTG 281 (330)
T ss_dssp EEEEEE-EEE-EB-T--TCSCHHHHHHHHHHHTSHHHHTTHHHH
T ss_pred EEEEEH-HHH-HH-C--CCCCHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 077214-666-53-4--899769999999997599999999974