HHsearch results for GI: 254780342 and protein with PDBid: 3c9h_A

>3c9h_A ABC transporter, substrate binding protein; structural genomics, MCSG, PSI-2, protein structure initiative; HET: CIT; 1.90A {Agrobacterium tumefaciens str}
Probab=93.80  E-value=0.1  Score=29.48  Aligned_cols=78  Identities=14%  Similarity=0.102  Sum_probs=46.8

Q ss_pred             CHHHHHHHHHHHHHHHHHCC--------CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCC-CCEEEEEECCHHHHHHH-
Q ss_conf             95799999999999863035--------834588379942588699999999999996106-98489985640578888-
Q gi|254780342|r    1 MYKILAVCLFLTTFSISYAR--------DADSCTPVRFADTGWTDIAATTAMTSVILEEIL-GYKTNIKLLAVPVTFRS-   70 (309)
Q Consensus         1 mkk~~~~~~~~~~~~~~~~~--------~~~~~~~I~ig~~~wte~~v~a~i~~~iLE~~l-Gy~Ve~~~~~~~~~~~a-   70 (309)
                      ||+.+.+|+++++.+++.+.        ......+++|=+  +++..+...|+.. .|++. |++|+++..++...++. 
T Consensus         1 ~~~~l~l~l~~~~a~~ala~~~~~~~~~~~~~~~~l~v~s--~~~~~~~~~li~~-Fe~~~PgI~V~~~~~~~~~~~~kl   77 (355)
T 3c9h_A            1 MRICLFLCLCLCMASPALAQVAVFPALSGKTDAQTLVVYS--SLDEPLATPMIEG-FQKANPDIAVHYEDMLTGEIYDRI   77 (355)
T ss_dssp             ---------------CEEEEEEEECCTTC----CEEEEEE--CSCHHHHHHHHHH-HHHHCTTCEEEEEECCHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE--CCCHHHHHHHHHH-HHHHCCCCEEEEEECCCHHHHHHH
T ss_conf             9079999999999999998886423435677799799997--9887899999999-998788938999968858999999


Q ss_pred             ---HHCC--CCEEEEE
Q ss_conf             ---5149--8139998
Q gi|254780342|r   71 ---LKNK--GIDIFMG   81 (309)
Q Consensus        71 ---l~~G--~iD~~~e   81 (309)
                         +.+|  ..|+...
T Consensus        78 ~~~~~ag~~~~Dv~~~   93 (355)
T 3c9h_A           78 VKETDAGKKTADFAFS   93 (355)
T ss_dssp             HHHHHTTCCBCSEEEE
T ss_pred             HHHHHCCCCCCCEEEE
T ss_conf             9875148986426761