HHsearch results for GI: 254780342 and protein with PDBid: 3c9h_A
>3c9h_A ABC transporter, substrate binding protein; structural genomics, MCSG, PSI-2, protein structure initiative; HET: CIT; 1.90A {Agrobacterium tumefaciens str}
Probab=93.80 E-value=0.1 Score=29.48 Aligned_cols=78 Identities=14% Similarity=0.102 Sum_probs=46.8
Q ss_pred CHHHHHHHHHHHHHHHHHCC--------CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCC-CCEEEEEECCHHHHHHH-
Q ss_conf 95799999999999863035--------834588379942588699999999999996106-98489985640578888-
Q gi|254780342|r 1 MYKILAVCLFLTTFSISYAR--------DADSCTPVRFADTGWTDIAATTAMTSVILEEIL-GYKTNIKLLAVPVTFRS- 70 (309)
Q Consensus 1 mkk~~~~~~~~~~~~~~~~~--------~~~~~~~I~ig~~~wte~~v~a~i~~~iLE~~l-Gy~Ve~~~~~~~~~~~a- 70 (309)
||+.+.+|+++++.+++.+. ......+++|=+ +++..+...|+.. .|++. |++|+++..++...++.
T Consensus 1 ~~~~l~l~l~~~~a~~ala~~~~~~~~~~~~~~~~l~v~s--~~~~~~~~~li~~-Fe~~~PgI~V~~~~~~~~~~~~kl 77 (355)
T 3c9h_A 1 MRICLFLCLCLCMASPALAQVAVFPALSGKTDAQTLVVYS--SLDEPLATPMIEG-FQKANPDIAVHYEDMLTGEIYDRI 77 (355)
T ss_dssp ---------------CEEEEEEEECCTTC----CEEEEEE--CSCHHHHHHHHHH-HHHHCTTCEEEEEECCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE--CCCHHHHHHHHHH-HHHHCCCCEEEEEECCCHHHHHHH
T ss_conf 9079999999999999998886423435677799799997--9887899999999-998788938999968858999999
Q ss_pred ---HHCC--CCEEEEE
Q ss_conf ---5149--8139998
Q gi|254780342|r 71 ---LKNK--GIDIFMG 81 (309)
Q Consensus 71 ---l~~G--~iD~~~e 81 (309)
+.+| ..|+...
T Consensus 78 ~~~~~ag~~~~Dv~~~ 93 (355)
T 3c9h_A 78 VKETDAGKKTADFAFS 93 (355)
T ss_dssp HHHHHTTCCBCSEEEE
T ss_pred HHHHHCCCCCCCEEEE
T ss_conf 9875148986426761