HHsearch results for GI: 254780342 and protein with PDBid: 3ix1_A
>3ix1_A N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine protein; periplasmic N-formyl-4-amino-5-aminomethyl-2-methylpyrimidin protein; HET: NFM; 2.40A {Bacillus halodurans c-125}
Probab=98.74 E-value=1.3e-06 Score=61.35 Aligned_cols=200 Identities=11% Similarity=0.105 Sum_probs=118.3
Q ss_pred CCEEEECCCC---CHHH-HHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCE
Q ss_conf 8379942588---6999-99999999996106984899856-40578888514981399984046413566665530470
Q gi|254780342|r 26 TPVRFADTGW---TDIA-ATTAMTSVILEEILGYKTNIKLL-AVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGSI 100 (309)
Q Consensus 26 ~~I~ig~~~w---te~~-v~a~i~~~iLE~~lGy~Ve~~~~-~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~~~~~~ 100 (309)
++|+|+ .+| ++.. ..-..-+-..|+. |.+|++... +.....++|.+|++|+...... ...........+
T Consensus 3 ~~v~~~-l~w~p~~~~ap~~vA~~~G~f~~~-Gl~Ve~~~~~~~~~~~~al~~G~~D~~~~~~~----~~~~~~~~g~~~ 76 (302)
T 3ix1_A 3 ETVEVM-LDWYPNAVHTFLYVAIENGYFAEE-GLDVDIVFPTNPTDPIQLTASGAIPLALSYQP----DVILARSKDLPV 76 (302)
T ss_dssp EEEEEE-CSSSCCGGGHHHHHHHHTTHHHHT-TEEEEEECCSSTTHHHHHHHHTSCSEEEECHH----HHHHHHHTTCCE
T ss_pred CCEEEE-ECCEECCCCHHHHHHHHCCHHHHC-CCEEEEEECCCCHHHHHHHHCCCCCEEEECHH----HHHHHHHCCCCE
T ss_conf 717998-488766064999999988938984-97189995798059999997799898997758----999987334885
Q ss_pred EEECCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHH
Q ss_conf 23013566853567863446412345535655556654420135785432005558766403545221001036652018
Q gi|254780342|r 101 KLVAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELASF 180 (309)
Q Consensus 101 ~~~~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~~ 180 (309)
...+........++.++. ..++++++|| +++.+|...+..........++..|+.....+++.....
T Consensus 77 ~~~~~~~~~~~~~l~~~~---~~~i~~~~DL-------kGK~v~~~~~~~~~~~l~~~l~~~Gl~~~~v~~v~~~~~--- 143 (302)
T 3ix1_A 77 VSVASVVRSPLNHVMFLA---EQDFDSPADL-------VGLTVGYPGIPVNEPILKTMVEAAGGDYEQVHLMDVGFE--- 143 (302)
T ss_dssp EEEEEEECSCCEEEEEEG---GGCCSSGGGG-------TTSEEEECSCTTHHHHHHHHHHHTTCCGGGCEEEECTTC---
T ss_pred EEEEEEECCCCCEEEEEC---CCCCCCHHHH-------CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCC---
T ss_conf 899854058973699853---7798887895-------676221789977899999999972899761178458843---
Q ss_pred HHHHHHHHCCCCEEEEE-ECCC-HHH-HC--CCCEEECCCCCCCCCCHHH-HHHHHCHHHHHHCHHHH-HHHHHC
Q ss_conf 99999996599369994-1242-232-01--5851400786546778658-35442777787488999-998740
Q gi|254780342|r 181 SQIRRDQRNNIPAVFLS-WEPH-PIN-SD--LNIHYLPGGEEISGFGEAS-VYTVVRSDYLDKCPNIS-RLLKNI 248 (309)
Q Consensus 181 a~l~~A~~~~~~~v~~~-wsp~-~~~-~~--~dl~~Ledp~~~~~~p~~~-~~~vv~~~~~~~~P~~~-~~L~~~ 248 (309)
...|+.+|+.+.+.. |.+. +.. .. .++..+... + ++.|.+. ...+++++|+++||++. +|++.+
T Consensus 144 --~~~al~~G~iDa~~~~~~~~~~~~~~~~g~~~~~~~~~-~-~g~~~~~~~~~~~~~~~~~~~p~~v~~f~~A~ 214 (302)
T 3ix1_A 144 --LGASIVSGRADAVVGTYINHEYPVLKHEGHDISYFNPV-D-YGVPEYDELVLISNEAYVEESGEVLAAFWRAA 214 (302)
T ss_dssp --HHHHHHHSSSSEEEEEETTTHHHHHHHTTCCEEEECGG-G-TTCCCCCSEEEEEEHHHHHHCHHHHHHHHHHH
T ss_pred --HHHHHHCCCCCEECCCCCCCHHHHHHHCCCCCCCCCHH-H-CCCCCCCCCCEECCHHHHHHCHHHHHHHHHHH
T ss_conf --89999859977000654660899998628763222588-7-09888766311046999987969999999999