HHsearch results for GI: 254780342 and protein with PDBid: 3k2d_A
>3k2d_A ABC-type metal ION transport system, periplasmic; alpha/beta domain, immune system; 2.60A {Vibrio vulnificus}
Probab=98.66 E-value=2.7e-07 Score=65.81 Aligned_cols=204 Identities=12% Similarity=0.063 Sum_probs=112.4
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEE-CCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEE
Q ss_conf 458837994258869999999999999610698489985-6405788885149813999840464135666655304702
Q gi|254780342|r 23 DSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKL-LAVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGSIK 101 (309)
Q Consensus 23 ~~~~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~-~~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~~~~~~~ 101 (309)
.+.++||||...|+...+.-..-+.++|+. |++||++. .+.....+||.+|+||+..-...|........ .+..+.
T Consensus 3 ~~~~~irvG~~~~~~~~~~~~~~k~~~e~~-Gl~Ve~~~f~~g~~~~~Al~~G~iD~~~~g~~~~~~~~~~~--~~~~~~ 79 (237)
T 3k2d_A 3 MDTSKVKVGVMAGAEAQVAEVAAKVAKEKY-GLDVELVTFTDYVTPNAALDDGSIDMNAFQHKPYLDRQVED--RDYKLT 79 (237)
T ss_dssp SCCCCEEEEEETTHHHHHHHHHHHHHHHHH-CCCEEEEEESCTTSHHHHHHHTSCSEEEEEEHHHHHHHHHH--HCCCEE
T ss_pred CCCCEEEEEEECCCHHHHHHHHHHHHHHHC-CCEEEEEEECCCHHHHHHHHCCCCCEEEECCHHHHHHHHCC--CCCEEE
T ss_conf 888738999607985999999977789866-98899998088256899997699777875457899864105--895079
Q ss_pred EECCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH-CCCCCCCEEEECCCCCC--
Q ss_conf 301356685356786344641234553565555665442013578543200555876640-35452210010366520--
Q gi|254780342|r 102 LVAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINN-NKFSLKGFRLIEASELA-- 178 (309)
Q Consensus 102 ~~~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~s~~~-- 178 (309)
..+.. ... ...+.. ....++.++ .+++.++.+.+..........+.. .++.+........+...
T Consensus 80 ~~~~~-~~~--~~~~~~----~~~~~~~~~------~kGk~ia~~~~~s~~~~~l~~l~~~~~~~~~~~~~~~~~~~d~~ 146 (237)
T 3k2d_A 80 IAGNT-FVY--PIAGYS----KQVKSVAAL------ADGVRIAVPNDPTNLGRSLLLLEQQGLIKLRPEVGLLATVRDIV 146 (237)
T ss_dssp EEEEC-CCC--CCEEEC----SSCSCSTTC------CTTCEEEEECSHHHHHHHHHHHHHTTSCEECTTCCSSCCGGGEE
T ss_pred EEECC-CCC--EEEEEC----CCCCCHHHH------CCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
T ss_conf 98425-544--069983----787655464------17987999558844999999999849974465544466502055
Q ss_pred ---------HHHHHHHHHHCCCCEEEEEECCCHHHHCCC----CEEECCCCCCCCCCHHHHHHHHCHHHHHHCHHHHHHH
Q ss_conf ---------189999999659936999412422320158----5140078654677865835442777787488999998
Q gi|254780342|r 179 ---------SFSQIRRDQRNNIPAVFLSWEPHPINSDLN----IHYLPGGEEISGFGEASVYTVVRSDYLDKCPNISRLL 245 (309)
Q Consensus 179 ---------~~a~l~~A~~~~~~~v~~~wsp~~~~~~~d----l~~Ledp~~~~~~p~~~~~~vv~~~~~~~~P~~~~~L 245 (309)
.......+...++++....|.|.......+ ..+.++.. .++.+..++|++ .++.|.+.+|+
T Consensus 147 ~~~~~~~~~~~~~~~~a~~~~~~da~~~~~p~~~~a~~~~~~~~i~~~~~~-----~~~~~~~v~r~~-~~n~e~v~k~v 220 (237)
T 3k2d_A 147 ENPKNITIMELDAAQLPRSLDDVALSIINTTYASSINLTPEKDGVFVEDKE-----SPYVNLIVARQD-NVQNENVQNFV 220 (237)
T ss_dssp ECTTCCEEEEECGGGHHHHTTTSSEEEECHHHHGGGTCCHHHHCSEECCSS-----SSCCEEEEEETT-TTTSHHHHHHH
T ss_pred HCCCCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHCCCCCCCEEEECCCC-----CCEEEEEEECCC-CCCCHHHHHHH
T ss_conf 453322433331667799752476369664288872058765557645889-----873699998650-01989999999
Q ss_pred HHC
Q ss_conf 740
Q gi|254780342|r 246 KNI 248 (309)
Q Consensus 246 ~~~ 248 (309)
+.+
T Consensus 221 ~A~ 223 (237)
T 3k2d_A 221 KAY 223 (237)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 997