HHsearch alignment for GI: 254780343 and conserved domain: pfam01545
>pfam01545 Cation_efflux Cation efflux family. Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt. These proteins are thought to be efflux pumps that remove these ions from cells.
Probab=100.00 E-value=0 Score=381.85 Aligned_cols=268 Identities=32% Similarity=0.604 Sum_probs=253.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999727999999999999999999999999995489986687241467799998968899998899999999
Q gi|254780343|r 23 ITALKIIAWYVTGFISLLSDGLESIVNIITAIISYFTLKYAYRPADNTHPFGHQKAEYIAAVVEGLLMTNIALIILYESW 102 (311)
Q Consensus 23 ~~~~k~~~g~~t~S~allada~~s~~D~~~~~~~l~~~~~s~k~~d~~~pyG~~r~E~l~~l~~~~~l~~~~~~i~~es~ 102 (311)
T Consensus 2 l~~~~~~~~~~t~S~allada~~sl~D~~~~~~~l~~~~~~~k~~~~~~pfG~~r~E~l~~l~~~i~l~~~~~~~~~~si 81 (273)
T pfam01545 2 LALAKLAAGLLTGSLALLADALHSLIDLLSSLLALLALRLSSRPPDKRHPFGHGRLEVLAALIVSLLLLGVGVFILYESI 81 (273)
T ss_pred EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 24178899998523999999999999999999999999996599977799708889899999999999999999999999
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 99863002232210267888872012467999998741033--0577875998665378878888877653027722468
Q gi|254780343|r 103 HNMSHSPSNDFSIMGLFIGFMANIISLFWGKWLIYSGEKNH--SAAFKANGQHFVADVVMSAGVLCGLLLVLITEYTVLD 180 (311)
Q Consensus 103 ~~l~~~~~~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~~~--s~~l~a~~~~~~~D~~~s~~vii~~~~~~~~~~~~~D 180 (311)
T Consensus 82 ~~l~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~~s~~~~~~~~~~~~~~~~~~D 160 (273)
T pfam01545 82 ERLISPEEIEPPGILL-LALISLVVNLLLALYLRRAGRKIGSKSPALRADALHALVDVLGSLAVLIGLLLILLTGLYIAD 160 (273)
T ss_pred HHHHHCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 9998266776137899-999999999999999998755147899899999999999999998999999999971967777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHH
Q ss_conf 76689999999999899999989974044555145899999864158883115157647557907999999988799989
Q gi|254780343|r 181 SIIACFMACNILYQGCKVISSSIKNLMDAAVKPEHLEKIKNIIALNASGSIGIHDLKIRQAGATFFINFHLVVDSHMIVL 260 (311)
Q Consensus 181 ~i~ai~i~~~i~~~~~~~~~~~~~~Ll~~s~~~~~~~~i~~~i~~~~~~V~~v~~l~~~~~G~~~~v~~~i~v~~~~~~~ 260 (311)
T Consensus 161 ~i~~iii~~~ii~~~~~~~~~s~~~Ll~~~~~~~~~~~i~~~i~-~~~~v~~v~~~~~~~~G~~~~v~v~i~v~~~~~~~ 239 (273)
T pfam01545 161 PLASLLIALLILYTGLRLLKESLSELLGASPDPELVDKIRKALE-ALPGVLGVHDLRVWKSGPTLLVEIHIEVDPDLTVE 239 (273)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH-CCCCCEEEEEEEEEEECCCEEEEEEEEECCCCCHH
T ss_conf 89999999999999999999999999677998678999999996-38995034357999968959999999989999899
Q ss_pred HHHHHHHHHHHHHHHHCC-CCEEEEEEECCCCC
Q ss_conf 999999999999998779-86899996058876
Q gi|254780343|r 261 DAHKICNKLERSLEENIG-QAIITIHIEPANEV 292 (311)
Q Consensus 261 eah~i~~~ie~~l~~~~~-~~~v~ih~ep~~~~ 292 (311)
T Consensus 240 ~~~~i~~~i~~~l~~~~~~i~~~~i~~~~~~~~ 272 (273)
T pfam01545 240 EAHEIADEIEKALKEKFPGIVHVTIHVEPAPEV 272 (273)
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
T ss_conf 999999999999998689988699981599988