HHsearch alignment for GI: 254780345 and conserved domain: PRK10901
>PRK10901 16S rRNA methyltransferase B; Provisional.
Probab=99.89 E-value=2.2e-22 Score=154.56 Aligned_cols=128 Identities=19% Similarity=0.223 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 46999999999999995699989999999985310013221120144343999999999999989999999997410357
Q gi|254780345|r 16 RGIARLAAVQALYQIDIIGCSTTEIISEYETYRFCADTELDVESVYLHVDLEWFRVIIHGVMDRKQHIDLLISSCLTEKW 95 (170)
Q Consensus 16 r~~aR~~aiq~Ly~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~d~~~~~~lv~~v~~~~~~id~~I~~~l~~~w 95 (170)
T Consensus 3 ~~n~R~~A~~~L~~v~~~g~~~~~~L~~~~-------------~~l~~~Dr~l~~elvyG~lR~~~~LD~il~~~~~~p- 68 (428)
T PRK10901 3 QYNLRSIAAQAVEQVVEQGQSLSNVLPPLQ-------------QKVSDKDKALLQELCFGVLRTLSQLEWLINKLMARP- 68 (428)
T ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHH-------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-
T ss_conf 764999999999999986992999999987-------------059998899999999999976899999999983799-
Q ss_pred CHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 6332353489999999999864355781033988999999833877231499999999952333
Q gi|254780345|r 96 SFSRLDMILCSILRAGVLELIECHSVPVEVIISEYVCIAHDFFYGDEPKFINAVLDKVSRKEEI 159 (170)
Q Consensus 96 ~~~rl~~~~~~iLr~a~~El~~~~~~p~~vvInE~V~lak~f~~~~~~~fVNaVL~ki~k~~~~ 159 (170)
T Consensus 69 -~~~~~~~v~~lLrlg~yQll~~-~iP~~AaVne~Ve~ak~~~~~~~~glVNAVLR~~~r~~~~ 130 (428)
T PRK10901 69 -MTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAVAIKRPQLKGLINGVLRQFQRQQEE 130 (428)
T ss_pred -CCCCCHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHH
T ss_conf -8543479999999999999617-9995147989999998616630467889999998604321