HHSEARCH alignment of GI: 254780345 and SCOP domain: d1q8ca_

Alignment
>d1q8ca_ a.79.1.2 (A:) Hypothetical protein MG027 {Mycoplasma genitalium [TaxId: 2097]}
Probab=96.65  E-value=0.0052  Score=34.89  Aligned_cols=127  Identities=21%  Similarity=0.313  Sum_probs=88.1

Q ss_pred             CHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
Q ss_conf             346999999999999995-699989999999985310013221120144343999999999999989999999997410-
Q gi|254780345|r   15 RRGIARLAAVQALYQIDI-IGCSTTEIISEYETYRFCADTELDVESVYLHVDLEWFRVIIHGVMDRKQHIDLLISSCLT-   92 (170)
Q Consensus        15 ~r~~aR~~aiq~Ly~~~~-~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~d~~~~~~lv~~v~~~~~~id~~I~~~l~-   92 (170)
                      .|+..|.+++..+|...| -....+.+-..|.++.-       .+..+    -.|-+.+|....++.-.....|...-- 
T Consensus         2 trtqrriaivefif~~lfflpk~a~~iqa~fl~yd~-------~er~l----n~wqk~ivk~fse~~~~f~~~ie~qq~~   70 (140)
T d1q8ca_           2 TRTQRRIAVVEFIFSLLFFLPKEAEVIQADFLEYDT-------KERQL----NEWQKLIVKAFSENIFSFQKKIEEQQLK   70 (140)
T ss_dssp             CHHHHHHHHHHHHHHHGGGCCCCHHHHHHHHHHTCC-------TTTCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC-------CCCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             622344778999999999674509999999983478-------64554----5899999999999999999999999988


Q ss_pred             ---------CCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf             ---------3576332353489999999999864355781033988999999833877231499999999
Q gi|254780345|r   93 ---------EKWSFSRLDMILCSILRAGVLELIECHSVPVEVIISEYVCIAHDFFYGDEPKFINAVLDKV  153 (170)
Q Consensus        93 ---------~~w~~~rl~~~~~~iLr~a~~El~~~~~~p~~vvInE~V~lak~f~~~~~~~fVNaVL~ki  153 (170)
                               .+.+-++++..-.++..+|+.|.. ...+..+..|+|++-+-..|+...+.+-..|.||++
T Consensus        71 nq~eiq~kynkisgkkidllt~avilcalseq~-a~~tdkplliseallimdhysq~~ekkqthalldkl  139 (140)
T d1q8ca_          71 NQLEIQTKYNKISGKKIDLLTTAVVLCALSEQK-AHNTDKPLLISEALLIMDHYSQGAEKKQTHALLDKL  139 (140)
T ss_dssp             CCCSCCCC--------CCHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHTTCCCTTSCSCTTTSCC
T ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_conf             889999886305551115899999999703877-626798634788999998773142577789999842


SCOP domain information

class: All alpha proteins
fold: NusB-like
superfamily: NusB-like
family: Hypothetical protein MG027
domain: Hypothetical protein MG027
species: Mycoplasma genitalium [TaxId: 2097]