BLAST/PSIBLAST alignment of GI: 254780345 and GI: 222085516 at iteration 1

>gi|222085516|ref|YP_002544046.1| transcription antitermination factor NusB [Agrobacterium radiobacter K84] Length = 160
>gi|254772607|sp|B9JCY3|NUSB_AGRRK RecName: Full=N utilization substance protein B homolog; Short=Protein nusB Length = 160
>gi|221722964|gb|ACM26120.1| transcription antitermination factor NusB [Agrobacterium radiobacter K84] Length = 160

 Score =  162 bits (409), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 76/156 (48%), Positives = 108/156 (69%), Gaps = 3/156 (1%)

Query: 1   MTIQDNKKDLKLSHRRGIARLAAVQALYQIDIIGCSTTEIISEYETYRFCADTELDVESV 60
           M+ QDN++  K +++RG ARLAAVQALYQ+DI G    E+++EYE +R     ELD ++ 
Sbjct: 1   MSNQDNERPAKTANQRGAARLAAVQALYQMDIGGTGVLEVVAEYEAHRLG--QELDGDT- 57

Query: 61  YLHVDLEWFRVIIHGVMDRKQHIDLLISSCLTEKWSFSRLDMILCSILRAGVLELIECHS 120
           YL  D  WFR I+ GV+  +  +D LI S L + W+ SRLD  + +ILRAG  E+++   
Sbjct: 58  YLKADASWFRSIVSGVVREQTRLDPLIGSALQDDWALSRLDSTVRAILRAGTFEILDRKD 117

Query: 121 VPVEVIISEYVCIAHDFFYGDEPKFINAVLDKVSRK 156
           VPV VI++EYV IAH FF  DEPK +NAVLD+++++
Sbjct: 118 VPVAVIVTEYVEIAHAFFDDDEPKLVNAVLDRIAKQ 153