BLAST/PSIBLAST alignment of GI: 254780345 and GI: 49475530 at iteration 1
>gi|49475530|ref|YP_033571.1| transcription antitermination protein NusB [Bartonella henselae str. Houston-1] Length = 158
>gi|81647946|sp|Q6G3K8|NUSB_BARHE RecName: Full=N utilization substance protein B homolog; Short=Protein nusB Length = 158
>gi|49238336|emb|CAF27560.1| N utilization substance protein B [Bartonella henselae str. Houston-1] Length = 158
 Score =  157 bits (398), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/152 (48%), Positives = 103/152 (67%), Gaps = 3/152 (1%)

Query: 5   DNKKDLKLSHRRGIARLAAVQALYQIDIIGCSTTEIISEYETYRFCADTELDVESVYLHV 64
           + K   +L+++RG ARLAAVQALYQ+DI+G    E  +EYE YR   D + D    YL  
Sbjct: 5   EGKYSPRLANKRGAARLAAVQALYQMDIVGSGVMETAAEYEAYRLGKDIDGDQ---YLDA 61

Query: 65  DLEWFRVIIHGVMDRKQHIDLLISSCLTEKWSFSRLDMILCSILRAGVLELIECHSVPVE 124
           D +WF  II GV+  ++ +D +++  L+ +WS SRLD IL +ILRAG+ ELI    VP+ 
Sbjct: 62  DFQWFLAIITGVVKDQKQLDPMLNQQLSAEWSLSRLDSILRAILRAGLWELINRQDVPIA 121

Query: 125 VIISEYVCIAHDFFYGDEPKFINAVLDKVSRK 156
           V++SEYV IA  FF GDEPK +NA+LD +++K
Sbjct: 122 VVMSEYVDIAKAFFEGDEPKLVNAILDSMAKK 153