PSIBLAST alignment of GI: 254780345 and protein with PDB id: 3d3b
>gi|220702382|pdb|3D3B|A Chain A, Structural And Functional Analysis Of The E. Coli Nusb-S10 Transcription Antitermination Complex. Length = 141
>gi|220702384|pdb|3D3C|A Chain A, Structural And Functional Analysis Of The E. Coli Nusb-S10 Transcription Antitermination Complex. Length = 141
Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 13/141 (9%)
Query: 21 LAAVQALYQIDIIGCSTTEIISEYETYRFCADTELDVESVYLHVDLEWFRVIIHGVMDRK 80
AVQALY + ++ ++ E VD+ +FR ++ GV
Sbjct: 13 ECAVQALYSWQLSQNDIADVEYQFLA-----------EQDVKDVDVLYFRELLAGVATNT 61
Query: 81 QHIDLLISSCLTEKWSFSRLDMILCSILRAGVLELIECHSVPVEVIISEYVCIAHDFFYG 140
++D L+ L+ L + ++LR + EL + VP +V I+E + +A F
Sbjct: 62 AYLDGLMKPYLSRL--LEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAE 119
Query: 141 DEPKFINAVLDKVSRKEEIKR 161
D KF+N VLDK + +
Sbjct: 120 DSHKFVNGVLDKAAPVIRPNK 140