RPSBLAST alignment for GI: 254780345 and conserved domain: PRK00202

>gnl|CDD|178926 PRK00202, nusB, transcription antitermination protein NusB; Reviewed. Length = 137

 Score =  135 bits (342), Expect = 6e-33
 Identities = 52/143 (36%), Positives = 78/143 (54%), Gaps = 12/143 (8%)

Query: 16  RGIARLAAVQALYQIDIIGCSTTEIISEYETYRFCADTELDVESVYLHVDLEWFRVIIHG 75
           R  AR AAVQALYQ ++ G    EII            +L  E  Y   D  +FR ++ G
Sbjct: 3   RRKAREAAVQALYQWELSGNDIAEIIEA----------QLLEEQ-YDKADPAYFRSLVRG 51

Query: 76  VMDRKQHIDLLISSCLTEKWSFSRLDMILCSILRAGVLELIECHSVPVEVIISEYVCIAH 135
           V++ +  +D LIS  L + W+  RLD +  +ILR  + EL+    VP +V+I+E + +A 
Sbjct: 52  VVENQAELDELISPYL-KDWTLERLDPVERAILRLALYELLFRDDVPYKVVINEAIELAK 110

Query: 136 DFFYGDEPKFINAVLDKVSRKEE 158
            F   D  KF+N VLDK++++  
Sbjct: 111 KFGDEDSHKFVNGVLDKIAKELR 133