RPSBLAST alignment of GI: 254780345 and protein with PDBid: 1tzv

>1tzv_A NUSB protein, N utilization substance protein B homolog; RNA-protein interaction, transcriptional antitermination, transcription regulation; 1.35A {Thermotoga maritima} SCOP: a.79.1.1 PDB: 1tzu_A 1tzt_A 1tzw_A 1tzx_A* Length = 142

 Score = 84.4 bits (208), Expect = 1e-17
 Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 12/141 (8%)

Query: 16  RGIARLAAVQALYQIDIIGCSTTEIISEYETYRFCADTELDVESVYLHVDLEWFRVIIHG 75
           R   RLA  +AL+Q +       E I E        D   D          E  R  I G
Sbjct: 5   RRRMRLAVFKALFQHEFRRDEDLEQILE-----EILDETYD------KKAKEDARRYIRG 53

Query: 76  VMDRKQHIDLLISSCLTEKWSFSRLDMILCSILRAGVLELIECHSVPVEVIISEYVCIAH 135
           + +    ID LIS    EKWS +RL ++  ++LR    EL+    +P+EV I E + IA 
Sbjct: 54  IKENLSMIDDLISRY-LEKWSLNRLSVVDRNVLRLATYELLFEKDIPIEVTIDEAIEIAK 112

Query: 136 DFFYGDEPKFINAVLDKVSRK 156
            +   +  KF+N +LD+++++
Sbjct: 113 RYGTENSGKFVNGILDRIAKE 133