RPSBLAST alignment of GI: 254780345 and protein with PDBid: 2jr0

>2jr0_A Protein NUSB, N utilization substance protein B homolog; antiterminator, transcription; NMR {Aquifex aeolicus} Length = 148

 Score = 87.2 bits (215), Expect = 2e-18
 Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 11/144 (7%)

Query: 15  RRGIARLAAVQALYQIDIIGCSTTEIISEYETYRFCADTELDVESVYLHVDLEWFRVIIH 74
            R  AR  A   LY+ D+ G +  E+  E    +   + +            E+ + ++ 
Sbjct: 3   YRKGARDTAFLVLYRWDLRGENPGELFKEVVEEKNIKNKD----------AYEYAKKLVD 52

Query: 75  GVMDRKQHIDLLISSCLTEKWSFSRLDMILCSILRAGVLELIECHSVPVEVIISEYVCIA 134
             +   + ID +I     + WS  RL  +  + LR GV ELI   S     +  + V + 
Sbjct: 53  TAVRHIEEIDSIIEKH-LKGWSIDRLGYVERNALRLGVAELIFLKSKEPGRVFIDIVDLV 111

Query: 135 HDFFYGDEPKFINAVLDKVSRKEE 158
             +      KF+N VL  + +   
Sbjct: 112 KKYADEKAGKFVNGVLSAIYKAYI 135