RPSBLAST alignment of GI: 254780345 and SCOP domain: d1ey1a_

Alignment

 Score = 90.2 bits (223), Expect = 8e-20
 Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 14/146 (9%)

Query: 11  KLSHRRGIARLAAVQALYQIDIIGCSTTEIISEYETYRFCADTELDVESVYLHVDLEWFR 70
           K + RR  AR  AVQALY   +      ++  +     F A+ ++        VD+ +FR
Sbjct: 2   KPAARR-RARECAVQALYSWQLSQNDIADVEYQ-----FLAEQDVK------DVDVLYFR 49

Query: 71  VIIHGVMDRKQHIDLLISSCLTEKWSFSRLDMILCSILRAGVLELIECHSVPVEVIISEY 130
            ++ GV     ++D L+   L        L  +  ++LR  + EL +   VP +V I+E 
Sbjct: 50  ELLAGVATNTAYLDGLMKPYL--SRLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEA 107

Query: 131 VCIAHDFFYGDEPKFINAVLDKVSRK 156
           + +A  F   D  KF+N VLDK +  
Sbjct: 108 IELAKSFGAEDSHKFVNGVLDKAAPV 133

SCOP domain information

class: All alpha proteins
fold: NusB-like
superfamily: NusB-like
family: Antitermination factor NusB
domain: Antitermination factor NusB
species: Escherichia coli [TaxId: 562]